RNA–Protein interactions for RNA: ENST00000471167.1

PRPF40A-206, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 333 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-206ENST00000471167 FGFR4P22455 802 aa6.71□□□□□ -1.34
PRPF40A-206ENST00000471167 DDX6P26196 483 aaKnown RBP eCLIP6.71□□□□□ -1.34
PRPF40A-206ENST00000471167 FLYWCH1Q4VC44 716 aa6.71□□□□□ -1.34
PRPF40A-206ENST00000471167 DACT2Q5SW24 774 aa6.71□□□□□ -1.34
PRPF40A-206ENST00000471167 GPR149Q86SP6 731 aa6.71□□□□□ -1.34
PRPF40A-206ENST00000471167 RHOT1Q8IXI2 618 aa6.71□□□□□ -1.34
PRPF40A-206ENST00000471167 FUBP1Q96AE4 644 aaKnown RBP6.71□□□□□ -1.34
PRPF40A-206ENST00000471167 MARS2Q96GW9 593 aaKnown RBP6.71□□□□□ -1.34
PRPF40A-206ENST00000471167 MRGPRX4Q96LA9 322 aa6.71□□□□□ -1.34
PRPF40A-206ENST00000471167 GSTO2Q9H4Y5 243 aa6.71□□□□□ -1.34
PRPF40A-206ENST00000471167 TMEM140Q9NV12 185 aa6.71□□□□□ -1.34
PRPF40A-206ENST00000471167 ZBTB21Q9ULJ3 1066 aa6.71□□□□□ -1.34
PRPF40A-206ENST00000471167 ATP11BQ9Y2G3 1177 aa6.71□□□□□ -1.34
PRPF40A-206ENST00000471167 SALL3Q9BXA9 1300 aa6.71□□□□□ -1.34
PRPF40A-206ENST00000471167 ADRA1BP35368 520 aa6.7□□□□□ -1.34
PRPF40A-206ENST00000471167 CTXN1P60606 82 aa6.7□□□□□ -1.34
PRPF40A-206ENST00000471167 KRT85P78386 507 aa6.7□□□□□ -1.34
PRPF40A-206ENST00000471167 PURAQ00577 322 aaKnown RBP6.7□□□□□ -1.34
PRPF40A-206ENST00000471167 DSC2Q02487 901 aa6.7□□□□□ -1.34
PRPF40A-206ENST00000471167 HECTD2Q5U5R9 776 aa6.7□□□□□ -1.34
PRPF40A-206ENST00000471167 MTMR8Q96EF0 704 aa6.7□□□□□ -1.34
PRPF40A-206ENST00000471167 C7orf25Q9BPX7 421 aa6.7□□□□□ -1.34
PRPF40A-206ENST00000471167 PRDM13Q9H4Q3 707 aa6.7□□□□□ -1.34
PRPF40A-206ENST00000471167 PACSIN3Q9UKS6 424 aa6.7□□□□□ -1.34
PRPF40A-206ENST00000471167 CCDC154A6NI56 674 aa6.69□□□□□ -1.34
PRPF40A-206ENST00000471167 B3GALT2O43825 422 aa6.69□□□□□ -1.34
PRPF40A-206ENST00000471167 ZNF280AP59817 542 aaPredicted RBP6.69□□□□□ -1.34
PRPF40A-206ENST00000471167 ACAP2Q15057 778 aa6.69□□□□□ -1.34
PRPF40A-206ENST00000471167 SMN1Q16637 294 aaKnown RBP6.69□□□□□ -1.34
PRPF40A-206ENST00000471167 KAT5Q92993 513 aa6.69□□□□□ -1.34
PRPF40A-206ENST00000471167 PUS7Q96PZ0 661 aaKnown RBP6.69□□□□□ -1.34
PRPF40A-206ENST00000471167 TOR3AQ9H497 397 aa6.69□□□□□ -1.34
PRPF40A-206ENST00000471167 COL4A3BPQ9Y5P4 624 aa6.69□□□□□ -1.34
PRPF40A-206ENST00000471167 SHTN1A0MZ66 631 aa6.68□□□□□ -1.34
PRPF40A-206ENST00000471167 CDHR4A6H8M9 788 aa6.68□□□□□ -1.34
PRPF40A-206ENST00000471167 CKBP12277 381 aa6.68□□□□□ -1.34
PRPF40A-206ENST00000471167 TYRP1P17643 537 aa6.68□□□□□ -1.34
PRPF40A-206ENST00000471167 CLK3P49761 638 aaKnown RBP6.68□□□□□ -1.34
PRPF40A-206ENST00000471167 INHBEP58166 350 aa6.68□□□□□ -1.34
PRPF40A-206ENST00000471167 HSD11B2P80365 405 aa6.68□□□□□ -1.34
PRPF40A-206ENST00000471167 GUCY1B3Q02153 619 aa6.68□□□□□ -1.34
PRPF40A-206ENST00000471167 SLC13A1Q9BZW2 595 aa6.68□□□□□ -1.34
PRPF40A-206ENST00000471167 MANSC1Q9H8J5 431 aa6.68□□□□□ -1.34
PRPF40A-206ENST00000471167 TMEM74BQ9NUR3 256 aa6.68□□□□□ -1.34
PRPF40A-206ENST00000471167 XPOTO43592 962 aaKnown RBP6.67□□□□□ -1.34
PRPF40A-206ENST00000471167 PPFIA4O75335 1185 aa6.67□□□□□ -1.34
PRPF40A-206ENST00000471167 CDKL5O76039 1030 aa6.67□□□□□ -1.34
PRPF40A-206ENST00000471167 SPATA31D3P0C874 917 aa6.67□□□□□ -1.34
PRPF40A-206ENST00000471167 FCER1AP12319 257 aa6.67□□□□□ -1.34
PRPF40A-206ENST00000471167 TGM1P22735 817 aa6.67□□□□□ -1.34
PRPF40A-206ENST00000471167 MPLP40238 635 aa6.67□□□□□ -1.34
PRPF40A-206ENST00000471167 SEC24CP53992 1094 aa6.67□□□□□ -1.34
PRPF40A-206ENST00000471167 CXADRP78310 365 aa6.67□□□□□ -1.34
PRPF40A-206ENST00000471167 CDC42EP1Q00587 391 aa6.67□□□□□ -1.34
PRPF40A-206ENST00000471167 CYP2A13Q16696 494 aa6.67□□□□□ -1.34
PRPF40A-206ENST00000471167 PTPN21Q16825 1174 aa6.67□□□□□ -1.34
PRPF40A-206ENST00000471167 SPATA31D4Q6ZUB0 917 aa6.67□□□□□ -1.34
PRPF40A-206ENST00000471167 CMTR2Q8IYT2 770 aaKnown RBP6.67□□□□□ -1.34
PRPF40A-206ENST00000471167 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.67□□□□□ -1.34
PRPF40A-206ENST00000471167 TMX3Q96JJ7 454 aa6.67□□□□□ -1.34
PRPF40A-206ENST00000471167 C11orf54Q9H0W9 315 aaPredicted RBP6.67□□□□□ -1.34
PRPF40A-206ENST00000471167 SLC45A2Q9UMX9 530 aa6.67□□□□□ -1.34
PRPF40A-206ENST00000471167 LMNAP02545 664 aaKnown RBP6.66□□□□□ -1.34
PRPF40A-206ENST00000471167 KIF23Q02241 960 aaPredicted RBP6.66□□□□□ -1.34
PRPF40A-206ENST00000471167 OLFML1Q6UWY5 402 aa6.66□□□□□ -1.34
PRPF40A-206ENST00000471167 BOD1Q96IK1 185 aa6.66□□□□□ -1.34
PRPF40A-206ENST00000471167 LRIG1Q96JA1 1093 aa6.66□□□□□ -1.34
PRPF40A-206ENST00000471167 TLR10Q9BXR5 811 aa6.66□□□□□ -1.34
PRPF40A-206ENST00000471167 CHMP4AQ9BY43 222 aa6.66□□□□□ -1.34
PRPF40A-206ENST00000471167 ALOXE3Q9BYJ1 711 aa6.66□□□□□ -1.34
PRPF40A-206ENST00000471167 ALG1L2C9J202 215 aa6.65□□□□□ -1.34
PRPF40A-206ENST00000471167 KIAA0391O15091 583 aaKnown RBP6.65□□□□□ -1.34
PRPF40A-206ENST00000471167 GRM6O15303 877 aa6.65□□□□□ -1.34
PRPF40A-206ENST00000471167 TEX33O43247 280 aa6.65□□□□□ -1.34
PRPF40A-206ENST00000471167 PLA2G5P39877 138 aa6.65□□□□□ -1.34
PRPF40A-206ENST00000471167 FXR1P51114 621 aaKnown RBP eCLIP6.65□□□□□ -1.34
PRPF40A-206ENST00000471167 NANOS3P60323 173 aaKnown RBP6.65□□□□□ -1.34
PRPF40A-206ENST00000471167 TAP1Q03518 808 aa6.65□□□□□ -1.34
PRPF40A-206ENST00000471167 TLE1Q04724 770 aa6.65□□□□□ -1.34
PRPF40A-206ENST00000471167 RNPEPQ9H4A4 650 aa6.65□□□□□ -1.34
PRPF40A-206ENST00000471167 PRSS29PA6NIE9 313 aa6.64□□□□□ -1.35
PRPF40A-206ENST00000471167 SGTAO43765 313 aa6.64□□□□□ -1.35
PRPF40A-206ENST00000471167 BRDTQ58F21 947 aaPredicted RBP6.64□□□□□ -1.35
PRPF40A-206ENST00000471167 ABHD17BQ5VST6 288 aa6.64□□□□□ -1.35
PRPF40A-206ENST00000471167 FITM2Q8N6M3 262 aa6.64□□□□□ -1.35
PRPF40A-206ENST00000471167 IL17RDQ8NFM7 739 aa6.64□□□□□ -1.35
PRPF40A-206ENST00000471167 TBC1D15Q8TC07 691 aa6.64□□□□□ -1.35
PRPF40A-206ENST00000471167 NSUN6Q8TEA1 469 aaKnown RBP6.64□□□□□ -1.35
PRPF40A-206ENST00000471167 NTN5Q8WTR8 489 aaPredicted RBP6.64□□□□□ -1.35
PRPF40A-206ENST00000471167 NUP133Q8WUM0 1156 aa6.64□□□□□ -1.35
PRPF40A-206ENST00000471167 HDAC10Q969S8 669 aa6.64□□□□□ -1.35
PRPF40A-206ENST00000471167 COQ10AQ96MF6 247 aa6.64□□□□□ -1.35
PRPF40A-206ENST00000471167 UNKLQ9H9P5 680 aaKnown RBP6.64□□□□□ -1.35
PRPF40A-206ENST00000471167 CYP4F11Q9HBI6 524 aa6.64□□□□□ -1.35
PRPF40A-206ENST00000471167 TDP1Q9NUW8 608 aa6.64□□□□□ -1.35
PRPF40A-206ENST00000471167 COL11A2P13942 1736 aaPredicted RBP6.64□□□□□ -1.35
PRPF40A-206ENST00000471167 MAST3O60307 1309 aa6.63□□□□□ -1.35
PRPF40A-206ENST00000471167 GPANK1O95872 356 aa6.63□□□□□ -1.35
PRPF40A-206ENST00000471167 HLA-DOAP06340 250 aa6.63□□□□□ -1.35
PRPF40A-206ENST00000471167 BMP5P22003 454 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms