RNA–Protein interactions for RNA: ENST00000470268.1

SF3B1-208, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 2,003 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-208ENST00000470268 KIAA0753Q2KHM9 967 aa5.23□□□□□ -1.57
SF3B1-208ENST00000470268 MTERF2Q49AM1 385 aa5.23□□□□□ -1.57
SF3B1-208ENST00000470268 XKR9Q5GH70 373 aa5.23□□□□□ -1.57
SF3B1-208ENST00000470268 MARCH8Q5T0T0 291 aa5.23□□□□□ -1.57
SF3B1-208ENST00000470268 CCDC183Q5T5S1 534 aa5.23□□□□□ -1.57
SF3B1-208ENST00000470268 FAM160B1Q5W0V3 765 aa5.23□□□□□ -1.57
SF3B1-208ENST00000470268 SCARA3Q6AZY7 606 aa5.23□□□□□ -1.57
SF3B1-208ENST00000470268 MAEAQ7L5Y9 396 aa5.23□□□□□ -1.57
SF3B1-208ENST00000470268 ELOA2Q8IYF1 753 aaPredicted RBP5.23□□□□□ -1.57
SF3B1-208ENST00000470268 DAW1Q8N136 415 aa5.23□□□□□ -1.57
SF3B1-208ENST00000470268 HPS3Q969F9 1004 aa5.23□□□□□ -1.57
SF3B1-208ENST00000470268 CEP170P1Q96L14 293 aa5.23□□□□□ -1.57
SF3B1-208ENST00000470268 C7orf25Q9BPX7 421 aa5.23□□□□□ -1.57
SF3B1-208ENST00000470268 PYM1Q9BRP8 204 aaKnown RBP5.23□□□□□ -1.57
SF3B1-208ENST00000470268 TNMDQ9H2S6 317 aa5.23□□□□□ -1.57
SF3B1-208ENST00000470268 CAPN10Q9HC96 672 aa5.23□□□□□ -1.57
SF3B1-208ENST00000470268 GPRC5CQ9NQ84 441 aa5.23□□□□□ -1.57
SF3B1-208ENST00000470268 PRDM10Q9NQV6 1147 aa5.23□□□□□ -1.57
SF3B1-208ENST00000470268 XPNPEP1Q9NQW7 623 aa5.23□□□□□ -1.57
SF3B1-208ENST00000470268 PDLIM7Q9NR12 457 aa5.23□□□□□ -1.57
SF3B1-208ENST00000470268 CYP26B1Q9NR63 512 aa5.23□□□□□ -1.57
SF3B1-208ENST00000470268 ANKEF1Q9NU02 776 aa5.23□□□□□ -1.57
SF3B1-208ENST00000470268 USP25Q9UHP3 1055 aa5.23□□□□□ -1.57
SF3B1-208ENST00000470268 CYP8B1Q9UNU6 501 aa5.23□□□□□ -1.57
SF3B1-208ENST00000470268 INPP5FQ9Y2H2 1132 aa5.23□□□□□ -1.57
SF3B1-208ENST00000470268 MSCO60682 206 aa5.23□□□□□ -1.57
SF3B1-208ENST00000470268 USO1O60763 962 aaKnown RBP5.23□□□□□ -1.57
SF3B1-208ENST00000470268 EIF4A3P38919 411 aaKnown RBP5.23□□□□□ -1.57
SF3B1-208ENST00000470268 SLC26A2P50443 739 aa5.23□□□□□ -1.57
SF3B1-208ENST00000470268 ACLYP53396 1101 aa5.23□□□□□ -1.57
SF3B1-208ENST00000470268 CHMP4BP1P59074 171 aa5.23□□□□□ -1.57
SF3B1-208ENST00000470268 ZNF445P59923 1031 aa5.23□□□□□ -1.57
SF3B1-208ENST00000470268 ADAM17P78536 824 aa5.23□□□□□ -1.57
SF3B1-208ENST00000470268 ZNF200P98182 395 aaPredicted RBP5.23□□□□□ -1.57
SF3B1-208ENST00000470268 GIT2Q14161 759 aa5.23□□□□□ -1.57
SF3B1-208ENST00000470268 PKN2Q16513 984 aaKnown RBP5.23□□□□□ -1.57
SF3B1-208ENST00000470268 NT5DC1Q5TFE4 455 aa5.23□□□□□ -1.57
SF3B1-208ENST00000470268 ISM2Q6H9L7 571 aa5.23□□□□□ -1.57
SF3B1-208ENST00000470268 FAM117BQ6P1L5 589 aa5.23□□□□□ -1.57
SF3B1-208ENST00000470268 IGF2-ASQ6U949 168 aa5.23□□□□□ -1.57
SF3B1-208ENST00000470268 GPBP1Q86WP2 473 aa5.23□□□□□ -1.57
SF3B1-208ENST00000470268 WFDC8Q8IUA0 241 aa5.23□□□□□ -1.57
SF3B1-208ENST00000470268 LMBR1Q8WVP7 490 aa5.23□□□□□ -1.57
SF3B1-208ENST00000470268 CTAGE1Q96RT6 745 aa5.23□□□□□ -1.57
SF3B1-208ENST00000470268 REEP2Q9BRK0 252 aa5.23□□□□□ -1.57
SF3B1-208ENST00000470268 EMILIN2Q9BXX0 1053 aa5.23□□□□□ -1.57
SF3B1-208ENST00000470268 FGFBP2Q9BYJ0 223 aa5.23□□□□□ -1.57
SF3B1-208ENST00000470268 MCOLN1Q9GZU1 580 aa5.23□□□□□ -1.57
SF3B1-208ENST00000470268 DHX33Q9H6R0 707 aaKnown RBP5.23□□□□□ -1.57
SF3B1-208ENST00000470268 MAGEF1Q9HAY2 307 aa5.23□□□□□ -1.57
SF3B1-208ENST00000470268 OSGEPQ9NPF4 335 aa5.23□□□□□ -1.57
SF3B1-208ENST00000470268 SETD4Q9NVD3 440 aa5.23□□□□□ -1.57
SF3B1-208ENST00000470268 ADAMTS1Q9UHI8 967 aa5.23□□□□□ -1.57
SF3B1-208ENST00000470268 TUBE1Q9UJT0 475 aa5.23□□□□□ -1.57
SF3B1-208ENST00000470268 OGDHLQ9ULD0 1010 aa5.23□□□□□ -1.57
SF3B1-208ENST00000470268 IGKV6-21A0A0C4DH24 114 aa5.22□□□□□ -1.57
SF3B1-208ENST00000470268 FRMD3A2A2Y4 597 aa5.22□□□□□ -1.57
SF3B1-208ENST00000470268 ARHGEF35A5YM69 484 aa5.22□□□□□ -1.57
SF3B1-208ENST00000470268 BIN1O00499 593 aa5.22□□□□□ -1.57
SF3B1-208ENST00000470268 PAX4O43316 350 aa5.22□□□□□ -1.57
SF3B1-208ENST00000470268 HBP1O60381 514 aa5.22□□□□□ -1.57
SF3B1-208ENST00000470268 DKC1O60832 514 aaKnown RBP eCLIP5.22□□□□□ -1.57
SF3B1-208ENST00000470268 SGPL1O95470 568 aa5.22□□□□□ -1.57
SF3B1-208ENST00000470268 C22orf31O95567 290 aa5.22□□□□□ -1.57
SF3B1-208ENST00000470268 GJB1P08034 283 aa5.22□□□□□ -1.57
SF3B1-208ENST00000470268 SMIM10L2AP0DMW4 78 aa5.22□□□□□ -1.57
SF3B1-208ENST00000470268 SMIM10L2BP0DMW5 78 aa5.22□□□□□ -1.57
SF3B1-208ENST00000470268 TFE3P19532 575 aaPredicted RBP5.22□□□□□ -1.57
SF3B1-208ENST00000470268 GUCY2CP25092 1073 aa5.22□□□□□ -1.57
SF3B1-208ENST00000470268 HOXC8P31273 242 aa5.22□□□□□ -1.57
SF3B1-208ENST00000470268 IGBP1P78318 339 aa5.22□□□□□ -1.57
SF3B1-208ENST00000470268 LRRC14Q15048 493 aa5.22□□□□□ -1.57
SF3B1-208ENST00000470268 CNNM4Q6P4Q7 775 aa5.22□□□□□ -1.57
SF3B1-208ENST00000470268 OTUD6AQ7L8S5 288 aa5.22□□□□□ -1.57
SF3B1-208ENST00000470268 RNF180Q86T96 592 aa5.22□□□□□ -1.57
SF3B1-208ENST00000470268 MAP4K3Q8IVH8 894 aa5.22□□□□□ -1.57
SF3B1-208ENST00000470268 LRRC71Q8N4P6 559 aa5.22□□□□□ -1.57
SF3B1-208ENST00000470268 U2AF1L4Q8WU68 220 aaKnown RBP5.22□□□□□ -1.57
SF3B1-208ENST00000470268 FAM167AQ96KS9 214 aa5.22□□□□□ -1.57
SF3B1-208ENST00000470268 DRC1Q96MC2 740 aa5.22□□□□□ -1.57
SF3B1-208ENST00000470268 FIZ1Q96SL8 496 aa5.22□□□□□ -1.57
SF3B1-208ENST00000470268 MTG1Q9BT17 334 aaPredicted RBP5.22□□□□□ -1.57
SF3B1-208ENST00000470268 FUCA2Q9BTY2 467 aa5.22□□□□□ -1.57
SF3B1-208ENST00000470268 SPON2Q9BUD6 331 aa5.22□□□□□ -1.57
SF3B1-208ENST00000470268 SPC25Q9HBM1 224 aa5.22□□□□□ -1.57
SF3B1-208ENST00000470268 NRBP2Q9NSY0 501 aa5.22□□□□□ -1.57
SF3B1-208ENST00000470268 HDAC6Q9UBN7 1215 aa5.22□□□□□ -1.57
SF3B1-208ENST00000470268 MAN1B1Q9UKM7 699 aa5.22□□□□□ -1.57
SF3B1-208ENST00000470268 ZNF215Q9UL58 517 aaPredicted RBP5.22□□□□□ -1.57
SF3B1-208ENST00000470268 TLR6Q9Y2C9 796 aa5.22□□□□□ -1.57
SF3B1-208ENST00000470268 A0A1W2PQ45 241 aaPredicted RBP5.21□□□□□ -1.57
SF3B1-208ENST00000470268 A0A1W2PQY0 241 aa5.21□□□□□ -1.57
SF3B1-208ENST00000470268 MBLAC1A4D2B0 266 aaPredicted RBP5.21□□□□□ -1.57
SF3B1-208ENST00000470268 GREM1O60565 184 aa5.21□□□□□ -1.57
SF3B1-208ENST00000470268 HIP1RO75146 1068 aa5.21□□□□□ -1.57
SF3B1-208ENST00000470268 MAFO75444 373 aaPredicted RBP5.21□□□□□ -1.57
SF3B1-208ENST00000470268 RPN1P04843 607 aaKnown RBP5.21□□□□□ -1.57
SF3B1-208ENST00000470268 IDEP14735 1019 aa5.21□□□□□ -1.57
SF3B1-208ENST00000470268 GARTP22102 1010 aa5.21□□□□□ -1.57
SF3B1-208ENST00000470268 KLRC1P26715 233 aa5.21□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms