RNA–Protein interactions for RNA: ENST00000470094.1

BRCA2-202, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 5

Gene BRCA2, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-202ENST00000470094 PIN1Q13526 163 aaPredicted RBP5.14□□□□□ -1.59
BRCA2-202ENST00000470094 PABPC1LQ4VXU2 614 aaKnown RBP5.14□□□□□ -1.59
BRCA2-202ENST00000470094 LY6G5CQ5SRR4 150 aa5.14□□□□□ -1.59
BRCA2-202ENST00000470094 ODR4Q5SWX8 454 aa5.14□□□□□ -1.59
BRCA2-202ENST00000470094 THEMIS2Q5TEJ8 643 aa5.14□□□□□ -1.59
BRCA2-202ENST00000470094 KCNV1Q6PIU1 500 aa5.14□□□□□ -1.59
BRCA2-202ENST00000470094 USP45Q70EL2 814 aa5.14□□□□□ -1.59
BRCA2-202ENST00000470094 ANKRD13AQ8IZ07 590 aa5.14□□□□□ -1.59
BRCA2-202ENST00000470094 PROKR1Q8TCW9 393 aa5.14□□□□□ -1.59
BRCA2-202ENST00000470094 NEU4Q8WWR8 484 aaPredicted RBP5.14□□□□□ -1.59
BRCA2-202ENST00000470094 PACSIN1Q9BY11 444 aa5.14□□□□□ -1.59
BRCA2-202ENST00000470094 TEX101Q9BY14 249 aa5.14□□□□□ -1.59
BRCA2-202ENST00000470094 RNPEPQ9H4A4 650 aa5.14□□□□□ -1.59
BRCA2-202ENST00000470094 GSTO2Q9H4Y5 243 aa5.14□□□□□ -1.59
BRCA2-202ENST00000470094 KLHL11Q9NVR0 708 aa5.14□□□□□ -1.59
BRCA2-202ENST00000470094 AKAP10O43572 662 aa5.13□□□□□ -1.59
BRCA2-202ENST00000470094 ABLIM3O94929 683 aa5.13□□□□□ -1.59
BRCA2-202ENST00000470094 POU2F2P09086 479 aa5.13□□□□□ -1.59
BRCA2-202ENST00000470094 AKAP5P24588 427 aa5.13□□□□□ -1.59
BRCA2-202ENST00000470094 BMPR1AP36894 532 aa5.13□□□□□ -1.59
BRCA2-202ENST00000470094 DSC2Q02487 901 aa5.13□□□□□ -1.59
BRCA2-202ENST00000470094 BEAN1Q3B7T3 259 aa5.13□□□□□ -1.59
BRCA2-202ENST00000470094 KHDC1Q4VXA5 237 aaKnown RBP5.13□□□□□ -1.59
BRCA2-202ENST00000470094 RHOUQ7L0Q8 258 aa5.13□□□□□ -1.59
BRCA2-202ENST00000470094 CATIPQ7Z7H3 387 aa5.13□□□□□ -1.59
BRCA2-202ENST00000470094 MRGPREQ86SM8 312 aa5.13□□□□□ -1.59
BRCA2-202ENST00000470094 MAPKAPK5Q8IW41 473 aa5.13□□□□□ -1.59
BRCA2-202ENST00000470094 ZFPM1Q8IX07 1006 aa5.13□□□□□ -1.59
BRCA2-202ENST00000470094 CPEB3Q8NE35 698 aaKnown RBP5.13□□□□□ -1.59
BRCA2-202ENST00000470094 TBC1D15Q8TC07 691 aa5.13□□□□□ -1.59
BRCA2-202ENST00000470094 VRK1Q99986 396 aaPredicted RBP5.13□□□□□ -1.59
BRCA2-202ENST00000470094 ZNF180Q9UJW8 692 aa5.13□□□□□ -1.59
BRCA2-202ENST00000470094 POLHQ9Y253 713 aa5.13□□□□□ -1.59
BRCA2-202ENST00000470094 A0A1B0GTW7 788 aa5.12□□□□□ -1.59
BRCA2-202ENST00000470094 AKAP8O43823 692 aaKnown RBP5.12□□□□□ -1.59
BRCA2-202ENST00000470094 S100BP04271 92 aaPredicted RBP5.12□□□□□ -1.59
BRCA2-202ENST00000470094 CFIP05156 583 aa5.12□□□□□ -1.59
BRCA2-202ENST00000470094 CKBP12277 381 aa5.12□□□□□ -1.59
BRCA2-202ENST00000470094 MALP21145 153 aa5.12□□□□□ -1.59
BRCA2-202ENST00000470094 DDX6P26196 483 aaKnown RBP eCLIP5.12□□□□□ -1.59
BRCA2-202ENST00000470094 ZFP36P26651 326 aaKnown RBP5.12□□□□□ -1.59
BRCA2-202ENST00000470094 SMARCA1P28370 1054 aa5.12□□□□□ -1.59
BRCA2-202ENST00000470094 RAB27AP51159 221 aa5.12□□□□□ -1.59
BRCA2-202ENST00000470094 KLF10Q13118 480 aa5.12□□□□□ -1.59
BRCA2-202ENST00000470094 FHL2Q14192 279 aa5.12□□□□□ -1.59
BRCA2-202ENST00000470094 PTPAQ15257 358 aa5.12□□□□□ -1.59
BRCA2-202ENST00000470094 PLEKHG6Q3KR16 790 aa5.12□□□□□ -1.59
BRCA2-202ENST00000470094 SPDYE7PQ495Y7 208 aa5.12□□□□□ -1.59
BRCA2-202ENST00000470094 ARMC6Q6NXE6 501 aa5.12□□□□□ -1.59
BRCA2-202ENST00000470094 FOXR2Q6PJQ5 311 aa5.12□□□□□ -1.59
BRCA2-202ENST00000470094 PRR18Q8N4B5 295 aa5.12□□□□□ -1.59
BRCA2-202ENST00000470094 AOPEPQ8N6M6 819 aa5.12□□□□□ -1.59
BRCA2-202ENST00000470094 C3orf20Q8ND61 904 aa5.12□□□□□ -1.59
BRCA2-202ENST00000470094 IL17RDQ8NFM7 739 aa5.12□□□□□ -1.59
BRCA2-202ENST00000470094 NUP133Q8WUM0 1156 aa5.12□□□□□ -1.59
BRCA2-202ENST00000470094 RGMAQ96B86 450 aa5.12□□□□□ -1.59
BRCA2-202ENST00000470094 DMRTA2Q96SC8 542 aa5.12□□□□□ -1.59
BRCA2-202ENST00000470094 ZSWIM1Q9BR11 485 aa5.12□□□□□ -1.59
BRCA2-202ENST00000470094 RNF181Q9P0P0 153 aa5.12□□□□□ -1.59
BRCA2-202ENST00000470094 MAP3K2Q9Y2U5 619 aa5.12□□□□□ -1.59
BRCA2-202ENST00000470094 NOX1Q9Y5S8 564 aa5.12□□□□□ -1.59
BRCA2-202ENST00000470094 CENPVL1A0A0U1RR11 272 aa5.11□□□□□ -1.59
BRCA2-202ENST00000470094 TMEM200CA6NKL6 621 aa5.11□□□□□ -1.59
BRCA2-202ENST00000470094 SLC16A6O15403 523 aa5.11□□□□□ -1.59
BRCA2-202ENST00000470094 LPXNO60711 386 aa5.11□□□□□ -1.59
BRCA2-202ENST00000470094 PRSS23O95084 383 aa5.11□□□□□ -1.59
BRCA2-202ENST00000470094 ARIH2O95376 493 aa5.11□□□□□ -1.59
BRCA2-202ENST00000470094 HMGB1P09429 215 aaKnown RBP5.11□□□□□ -1.59
BRCA2-202ENST00000470094 SBK3P0C264 359 aa5.11□□□□□ -1.59
BRCA2-202ENST00000470094 FGFR4P22455 802 aa5.11□□□□□ -1.59
BRCA2-202ENST00000470094 SLC6A4P31645 630 aa5.11□□□□□ -1.59
BRCA2-202ENST00000470094 GUCY1B3Q02153 619 aa5.11□□□□□ -1.59
BRCA2-202ENST00000470094 OCA2Q04671 838 aa5.11□□□□□ -1.59
BRCA2-202ENST00000470094 RESTQ13127 1097 aa5.11□□□□□ -1.59
BRCA2-202ENST00000470094 PGS1Q32NB8 556 aa5.11□□□□□ -1.59
BRCA2-202ENST00000470094 SLC4A10Q6U841 1118 aa5.11□□□□□ -1.59
BRCA2-202ENST00000470094 TMEM132CQ8N3T6 1108 aa5.11□□□□□ -1.59
BRCA2-202ENST00000470094 AMER2Q8N7J2 671 aa5.11□□□□□ -1.59
BRCA2-202ENST00000470094 JPH3Q8WXH2 748 aaPredicted RBP5.11□□□□□ -1.59
BRCA2-202ENST00000470094 LARP4BQ92615 738 aaKnown RBP5.11□□□□□ -1.59
BRCA2-202ENST00000470094 MVB12AQ96EY5 273 aa5.11□□□□□ -1.59
BRCA2-202ENST00000470094 PNKPQ96T60 521 aa5.11□□□□□ -1.59
BRCA2-202ENST00000470094 MLST8Q9BVC4 326 aa5.11□□□□□ -1.59
BRCA2-202ENST00000470094 RHOBTB2Q9BYZ6 727 aa5.11□□□□□ -1.59
BRCA2-202ENST00000470094 GTPBP4Q9BZE4 634 aaKnown RBP5.11□□□□□ -1.59
BRCA2-202ENST00000470094 PCED1AQ9H1Q7 454 aa5.11□□□□□ -1.59
BRCA2-202ENST00000470094 KMT5AQ9NQR1 393 aa5.11□□□□□ -1.59
BRCA2-202ENST00000470094 GNL3LQ9NVN8 582 aaKnown RBP5.11□□□□□ -1.59
BRCA2-202ENST00000470094 JKAMPQ9P055 326 aa5.11□□□□□ -1.59
BRCA2-202ENST00000470094 PNMA8BQ9ULN7 279 aaPredicted RBP5.11□□□□□ -1.59
BRCA2-202ENST00000470094 HS3ST4Q9Y661 456 aa5.11□□□□□ -1.59
BRCA2-202ENST00000470094 LRRC14BA6NHZ5 514 aa5.1□□□□□ -1.59
BRCA2-202ENST00000470094 UNC119BA6NIH7 251 aa5.1□□□□□ -1.59
BRCA2-202ENST00000470094 MARCH11A6NNE9 402 aa5.1□□□□□ -1.59
BRCA2-202ENST00000470094 SLC43A1O75387 559 aa5.1□□□□□ -1.59
BRCA2-202ENST00000470094 OFD1O75665 1012 aa5.1□□□□□ -1.59
BRCA2-202ENST00000470094 CDKL5O76039 1030 aa5.1□□□□□ -1.59
BRCA2-202ENST00000470094 AGFG2O95081 481 aa5.1□□□□□ -1.59
BRCA2-202ENST00000470094 GPANK1O95872 356 aa5.1□□□□□ -1.59
BRCA2-202ENST00000470094 FTLP02792 175 aaPredicted RBP5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 174.1 ms