RNA–Protein interactions for RNA: ENST00000469750.5

BRAT1-204, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 2

Gene BRAT1, Length 5,226 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-204ENST00000469750 RPS6KA5O75582 802 aa16.62■□□□□ 0.25
BRAT1-204ENST00000469750 PIGHQ14442 188 aaPredicted RBP16.62■□□□□ 0.25
BRAT1-204ENST00000469750 NAB2Q15742 525 aa16.62■□□□□ 0.25
BRAT1-204ENST00000469750 PDCD2Q16342 344 aaPredicted RBP16.62■□□□□ 0.25
BRAT1-204ENST00000469750 SAMD7Q7Z3H4 446 aa16.62■□□□□ 0.25
BRAT1-204ENST00000469750 DAGLBQ8NCG7 672 aa16.62■□□□□ 0.25
BRAT1-204ENST00000469750 COG1Q8WTW3 980 aa16.62■□□□□ 0.25
BRAT1-204ENST00000469750 POLR3CQ9BUI4 534 aaPredicted RBP16.62■□□□□ 0.25
BRAT1-204ENST00000469750 EPC1Q9H2F5 836 aa16.62■□□□□ 0.25
BRAT1-204ENST00000469750 STK25O00506 426 aa16.62■□□□□ 0.25
BRAT1-204ENST00000469750 P4HA2O15460 535 aa16.62■□□□□ 0.25
BRAT1-204ENST00000469750 NDFIP2Q9NV92 336 aa16.62■□□□□ 0.25
BRAT1-204ENST00000469750 HPS5Q9UPZ3 1129 aa16.62■□□□□ 0.25
BRAT1-204ENST00000469750 PCDHB2Q9Y5E7 798 aa16.62■□□□□ 0.25
BRAT1-204ENST00000469750 FRMPD1Q5SYB0 1578 aa16.62■□□□□ 0.25
BRAT1-204ENST00000469750 AP3B1O00203 1094 aa16.62■□□□□ 0.25
BRAT1-204ENST00000469750 CYP2C9P11712 490 aa16.62■□□□□ 0.25
BRAT1-204ENST00000469750 TROAPQ12815 778 aa16.62■□□□□ 0.25
BRAT1-204ENST00000469750 FASTKD1Q53R41 847 aaKnown RBP16.62■□□□□ 0.25
BRAT1-204ENST00000469750 PIP4K2CQ8TBX8 421 aa16.62■□□□□ 0.25
BRAT1-204ENST00000469750 GPRASP2Q96D09 838 aa16.62■□□□□ 0.25
BRAT1-204ENST00000469750 LRRC37BQ96QE4 947 aa16.62■□□□□ 0.25
BRAT1-204ENST00000469750 PRDM5Q9NQX1 630 aaPredicted RBP16.62■□□□□ 0.25
BRAT1-204ENST00000469750 IQSEC2Q5JU85 1478 aa16.61■□□□□ 0.25
BRAT1-204ENST00000469750 SLC9A1P19634 815 aa16.61■□□□□ 0.25
BRAT1-204ENST00000469750 EFCAB12Q6NXP0 572 aa16.61■□□□□ 0.25
BRAT1-204ENST00000469750 INTS5Q6P9B9 1019 aaKnown RBP16.61■□□□□ 0.25
BRAT1-204ENST00000469750 MCEEQ96PE7 176 aa16.61■□□□□ 0.25
BRAT1-204ENST00000469750 LRRC1Q9BTT6 524 aa16.61■□□□□ 0.25
BRAT1-204ENST00000469750 ZNF212Q9UDV6 495 aa16.61■□□□□ 0.25
BRAT1-204ENST00000469750 EXTL3O43909 919 aa16.61■□□□□ 0.25
BRAT1-204ENST00000469750 PHF2O75151 1096 aa16.61■□□□□ 0.25
BRAT1-204ENST00000469750 ITGA4P13612 1032 aa16.61■□□□□ 0.25
BRAT1-204ENST00000469750 POLE2P56282 527 aa16.61■□□□□ 0.25
BRAT1-204ENST00000469750 RPS6P62753 249 aaKnown RBP16.61■□□□□ 0.25
BRAT1-204ENST00000469750 NT5C1AQ9BXI3 368 aa16.61■□□□□ 0.25
BRAT1-204ENST00000469750 SENP1Q9P0U3 644 aa16.61■□□□□ 0.25
BRAT1-204ENST00000469750 PDGFRBP09619 1106 aa16.61■□□□□ 0.25
BRAT1-204ENST00000469750 KLRK1P26718 216 aa16.61■□□□□ 0.25
BRAT1-204ENST00000469750 SESN2P58004 480 aaPredicted RBP16.61■□□□□ 0.25
BRAT1-204ENST00000469750 TMEM62Q0P6H9 643 aa16.61■□□□□ 0.25
BRAT1-204ENST00000469750 SMAD1Q15797 465 aaKnown RBP16.61■□□□□ 0.25
BRAT1-204ENST00000469750 SZRD1Q7Z422 152 aa16.61■□□□□ 0.25
BRAT1-204ENST00000469750 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.61■□□□□ 0.25
BRAT1-204ENST00000469750 TMEM117Q9H0C3 514 aa16.61■□□□□ 0.25
BRAT1-204ENST00000469750 C3orf70A6NLC5 250 aaPredicted RBP16.61■□□□□ 0.25
BRAT1-204ENST00000469750 CYBBP04839 570 aa16.61■□□□□ 0.25
BRAT1-204ENST00000469750 FGFR4P22455 802 aa16.61■□□□□ 0.25
BRAT1-204ENST00000469750 SLC15A2Q16348 729 aa16.61■□□□□ 0.25
BRAT1-204ENST00000469750 CATSPER3Q86XQ3 398 aa16.61■□□□□ 0.25
BRAT1-204ENST00000469750 RNF135Q8IUD6 432 aa16.61■□□□□ 0.25
BRAT1-204ENST00000469750 LRRC71Q8N4P6 559 aa16.61■□□□□ 0.25
BRAT1-204ENST00000469750 TAAR1Q96RJ0 339 aa16.61■□□□□ 0.25
BRAT1-204ENST00000469750 IRX2Q9BZI1 471 aaPredicted RBP16.61■□□□□ 0.25
BRAT1-204ENST00000469750 SCAF8Q9UPN6 1271 aaKnown RBP16.61■□□□□ 0.25
BRAT1-204ENST00000469750 CCZ1BP86790 482 aa16.6■□□□□ 0.25
BRAT1-204ENST00000469750 CCZ1P86791 482 aaPredicted RBP16.6■□□□□ 0.25
BRAT1-204ENST00000469750 DEUP1Q05D60 604 aa16.6■□□□□ 0.25
BRAT1-204ENST00000469750 CAPRIN1Q14444 709 aaKnown RBP16.6■□□□□ 0.25
BRAT1-204ENST00000469750 ZBTB41Q5SVQ8 909 aa16.6■□□□□ 0.25
BRAT1-204ENST00000469750 TRAPPC11Q7Z392 1133 aa16.6■□□□□ 0.25
BRAT1-204ENST00000469750 PPHLN1Q8NEY8 458 aaKnown RBP16.6■□□□□ 0.25
BRAT1-204ENST00000469750 TECPR2O15040 1411 aa16.6■□□□□ 0.25
BRAT1-204ENST00000469750 ARHGDIAP52565 204 aa16.6■□□□□ 0.25
BRAT1-204ENST00000469750 LRRC14Q15048 493 aa16.6■□□□□ 0.25
BRAT1-204ENST00000469750 SV2CQ496J9 727 aa16.6■□□□□ 0.25
BRAT1-204ENST00000469750 SLC24A3Q9HC58 644 aa16.6■□□□□ 0.25
BRAT1-204ENST00000469750 DYRK4Q9NR20 520 aa16.6■□□□□ 0.25
BRAT1-204ENST00000469750 A0A1W2PQJ5 194 aa16.6■□□□□ 0.25
BRAT1-204ENST00000469750 E4F1Q66K89 784 aaPredicted RBP16.6■□□□□ 0.25
BRAT1-204ENST00000469750 NRBF2Q96F24 287 aa16.6■□□□□ 0.25
BRAT1-204ENST00000469750 IL25Q9H293 177 aa16.6■□□□□ 0.25
BRAT1-204ENST00000469750 ICAM1P05362 532 aa16.6■□□□□ 0.25
BRAT1-204ENST00000469750 NPEPPSP55786 919 aa16.6■□□□□ 0.25
BRAT1-204ENST00000469750 LAMC2Q13753 1193 aa16.6■□□□□ 0.25
BRAT1-204ENST00000469750 LBRQ14739 615 aaKnown RBP16.6■□□□□ 0.25
BRAT1-204ENST00000469750 DGKDQ16760 1214 aa16.6■□□□□ 0.25
BRAT1-204ENST00000469750 MTHFD1LQ6UB35 978 aa16.6■□□□□ 0.25
BRAT1-204ENST00000469750 ANKMY2Q8IV38 441 aa16.6■□□□□ 0.25
BRAT1-204ENST00000469750 SMYD3Q9H7B4 428 aa16.6■□□□□ 0.25
BRAT1-204ENST00000469750 RRN3P2A6NIE6 340 aa16.59■□□□□ 0.25
BRAT1-204ENST00000469750 ZNF185O15231 689 aa16.59■□□□□ 0.25
BRAT1-204ENST00000469750 PSMD3O43242 534 aa16.59■□□□□ 0.25
BRAT1-204ENST00000469750 E2F6O75461 281 aa16.59■□□□□ 0.25
BRAT1-204ENST00000469750 NLRP14Q86W24 1093 aa16.59■□□□□ 0.25
BRAT1-204ENST00000469750 CXorf38Q8TB03 319 aa16.59■□□□□ 0.25
BRAT1-204ENST00000469750 SH3GL3Q99963 347 aa16.59■□□□□ 0.25
BRAT1-204ENST00000469750 NIF3L1Q9GZT8 377 aa16.59■□□□□ 0.25
BRAT1-204ENST00000469750 LSM7Q9UK45 103 aaKnown RBP16.59■□□□□ 0.25
BRAT1-204ENST00000469750 LOC102724159A0A0B4J2E5 919 aa16.59■□□□□ 0.25
BRAT1-204ENST00000469750 EFTUD2Q15029 972 aaKnown RBP eCLIP16.59■□□□□ 0.251e-6■■■■■ 29.8
BRAT1-204ENST00000469750 PWP2Q15269 919 aaKnown RBP16.59■□□□□ 0.25
BRAT1-204ENST00000469750 ELOA2Q8IYF1 753 aaPredicted RBP16.59■□□□□ 0.25
BRAT1-204ENST00000469750 ZC3H4Q9UPT8 1303 aaKnown RBP16.59■□□□□ 0.25
BRAT1-204ENST00000469750 PCSK1P29120 753 aa16.59■□□□□ 0.25
BRAT1-204ENST00000469750 ACADSBP45954 432 aa16.59■□□□□ 0.25
BRAT1-204ENST00000469750 VSNL1P62760 191 aa16.59■□□□□ 0.25
BRAT1-204ENST00000469750 GLB1LQ6UWU2 654 aa16.59■□□□□ 0.25
BRAT1-204ENST00000469750 MS4A14Q96JA4 679 aa16.59■□□□□ 0.25
BRAT1-204ENST00000469750 RMDN2Q96LZ7 410 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms