RNA–Protein interactions for RNA: ENST00000468143.1

CDHR3-205, Transcript of cadherin related family member 3, humanhuman

TSL 4

Gene CDHR3, Length 575 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-205ENST00000468143 IQUBQ8NA54 791 aa12.57□□□□□ -0.4
CDHR3-205ENST00000468143 KREMEN2Q8NCW0 462 aa12.57□□□□□ -0.4
CDHR3-205ENST00000468143 NECTIN4Q96NY8 510 aa12.57□□□□□ -0.4
CDHR3-205ENST00000468143 ACCSQ96QU6 501 aa12.57□□□□□ -0.4
CDHR3-205ENST00000468143 STRA6Q9BX79 667 aa12.57□□□□□ -0.4
CDHR3-205ENST00000468143 BLZF1Q9H2G9 400 aa12.57□□□□□ -0.4
CDHR3-205ENST00000468143 C11orf16Q9NQ32 467 aa12.57□□□□□ -0.4
CDHR3-205ENST00000468143 KBTBD4Q9NVX7 518 aa12.57□□□□□ -0.4
CDHR3-205ENST00000468143 FAM13BQ9NYF5 915 aa12.57□□□□□ -0.4
CDHR3-205ENST00000468143 SEL1LQ9UBV2 794 aa12.57□□□□□ -0.4
CDHR3-205ENST00000468143 CPSF3Q9UKF6 684 aaKnown RBP12.57□□□□□ -0.4
CDHR3-205ENST00000468143 AGO2Q9UKV8 859 aaKnown RBP12.57□□□□□ -0.4
CDHR3-205ENST00000468143 C2CD4DB7Z1M9 353 aa12.56□□□□□ -0.4
CDHR3-205ENST00000468143 PPP1R37O75864 691 aa12.56□□□□□ -0.4
CDHR3-205ENST00000468143 ADSSP30520 456 aa12.56□□□□□ -0.4
CDHR3-205ENST00000468143 ABCD1P33897 745 aa12.56□□□□□ -0.4
CDHR3-205ENST00000468143 MCM4P33991 863 aa12.56□□□□□ -0.4
CDHR3-205ENST00000468143 ARPP19P56211 112 aa12.56□□□□□ -0.4
CDHR3-205ENST00000468143 CREMQ03060 361 aa12.56□□□□□ -0.4
CDHR3-205ENST00000468143 ZBTB6Q15916 424 aa12.56□□□□□ -0.4
CDHR3-205ENST00000468143 KYAT1Q16773 422 aa12.56□□□□□ -0.4
CDHR3-205ENST00000468143 TMEM31Q5JXX7 168 aa12.56□□□□□ -0.4
CDHR3-205ENST00000468143 L1TD1Q5T7N2 865 aaKnown RBP12.56□□□□□ -0.4
CDHR3-205ENST00000468143 RESP18Q5W5W9 173 aa12.56□□□□□ -0.4
CDHR3-205ENST00000468143 JADE1Q6IE81 842 aa12.56□□□□□ -0.4
CDHR3-205ENST00000468143 SLFN12LQ6IEE8 588 aa12.56□□□□□ -0.4
CDHR3-205ENST00000468143 CCDC65Q8IXS2 484 aa12.56□□□□□ -0.4
CDHR3-205ENST00000468143 GPR65Q8IYL9 337 aa12.56□□□□□ -0.4
CDHR3-205ENST00000468143 SYCP3Q8IZU3 236 aa12.56□□□□□ -0.4
CDHR3-205ENST00000468143 GLIS3Q8NEA6 775 aa12.56□□□□□ -0.4
CDHR3-205ENST00000468143 ZSWIM2Q8NEG5 633 aa12.56□□□□□ -0.4
CDHR3-205ENST00000468143 POMGNT1Q8WZA1 660 aa12.56□□□□□ -0.4
CDHR3-205ENST00000468143 LRFN3Q9BTN0 628 aa12.56□□□□□ -0.4
CDHR3-205ENST00000468143 LRRC27Q9C0I9 530 aa12.56□□□□□ -0.4
CDHR3-205ENST00000468143 TNMDQ9H2S6 317 aa12.56□□□□□ -0.4
CDHR3-205ENST00000468143 PIDD1Q9HB75 910 aa12.56□□□□□ -0.4
CDHR3-205ENST00000468143 EXOC7Q9UPT5 735 aa12.56□□□□□ -0.4
CDHR3-205ENST00000468143 PCDHB13Q9Y5F0 798 aa12.56□□□□□ -0.4
CDHR3-205ENST00000468143 CDY1Q9Y6F8 540 aa12.56□□□□□ -0.4
CDHR3-205ENST00000468143 STYXL1Q9Y6J8 313 aa12.56□□□□□ -0.4
CDHR3-205ENST00000468143 FRMD3A2A2Y4 597 aa12.55□□□□□ -0.4
CDHR3-205ENST00000468143 GOLGA8IPA6NC78 632 aa12.55□□□□□ -0.4
CDHR3-205ENST00000468143 GOLGA8JA6NMD2 632 aa12.55□□□□□ -0.4
CDHR3-205ENST00000468143 AFMP43652 599 aa12.55□□□□□ -0.4
CDHR3-205ENST00000468143 ASIC1P78348 528 aa12.55□□□□□ -0.4
CDHR3-205ENST00000468143 AMPD3Q01432 767 aa12.55□□□□□ -0.4
CDHR3-205ENST00000468143 VARS2Q5ST30 1063 aaKnown RBP12.55□□□□□ -0.4
CDHR3-205ENST00000468143 PDXDC1Q6P996 788 aa12.55□□□□□ -0.4
CDHR3-205ENST00000468143 ELMSAN1Q6PJG2 1045 aa12.55□□□□□ -0.4
CDHR3-205ENST00000468143 CRELD2Q6UXH1 353 aaPredicted RBP12.55□□□□□ -0.4
CDHR3-205ENST00000468143 GRAMD1CQ8IYS0 662 aa12.55□□□□□ -0.4
CDHR3-205ENST00000468143 NOC3LQ8WTT2 800 aaKnown RBP12.55□□□□□ -0.4
CDHR3-205ENST00000468143 LEO1Q8WVC0 666 aaPredicted RBP12.55□□□□□ -0.4
CDHR3-205ENST00000468143 SMG7Q92540 1137 aaKnown RBP12.55□□□□□ -0.4
CDHR3-205ENST00000468143 HVCN1Q96D96 273 aa12.55□□□□□ -0.4
CDHR3-205ENST00000468143 SAAL1Q96ER3 474 aa12.55□□□□□ -0.4
CDHR3-205ENST00000468143 SPATA32Q96LK8 384 aa12.55□□□□□ -0.4
CDHR3-205ENST00000468143 FAM213AQ9BRX8 229 aa12.55□□□□□ -0.4
CDHR3-205ENST00000468143 TRIM9Q9C026 710 aa12.55□□□□□ -0.4
CDHR3-205ENST00000468143 CUEDC2Q9H467 287 aa12.55□□□□□ -0.4
CDHR3-205ENST00000468143 PLEKHA4Q9H4M7 779 aa12.55□□□□□ -0.4
CDHR3-205ENST00000468143 PCIF1Q9H4Z3 704 aa12.55□□□□□ -0.4
CDHR3-205ENST00000468143 OLFML3Q9NRN5 406 aa12.55□□□□□ -0.4
CDHR3-205ENST00000468143 MTRRQ9UBK8 725 aa12.55□□□□□ -0.4
CDHR3-205ENST00000468143 LIMD1Q9UGP4 676 aa12.55□□□□□ -0.4
CDHR3-205ENST00000468143 DPP7Q9UHL4 492 aa12.55□□□□□ -0.4
CDHR3-205ENST00000468143 SERTAD1Q9UHV2 236 aa12.55□□□□□ -0.4
CDHR3-205ENST00000468143 RAPGEFL1Q9UHV5 662 aa12.55□□□□□ -0.4
CDHR3-205ENST00000468143 UBQLN1Q9UMX0 589 aaKnown RBP12.55□□□□□ -0.4
CDHR3-205ENST00000468143 NR2E1Q9Y466 385 aa12.55□□□□□ -0.4
CDHR3-205ENST00000468143 TIMM13Q9Y5L4 95 aaPredicted RBP12.55□□□□□ -0.4
CDHR3-205ENST00000468143 TTC28Q96AY4 2481 aa12.54□□□□□ -0.4
CDHR3-205ENST00000468143 A0A1B0GVL5 298 aa12.54□□□□□ -0.4
CDHR3-205ENST00000468143 PPEF2O14830 753 aa12.54□□□□□ -0.4
CDHR3-205ENST00000468143 GPR37L1O60883 481 aa12.54□□□□□ -0.4
CDHR3-205ENST00000468143 ZMYND10O75800 440 aa12.54□□□□□ -0.4
CDHR3-205ENST00000468143 ADRB2P07550 413 aa12.54□□□□□ -0.4
CDHR3-205ENST00000468143 NFICP08651 508 aa12.54□□□□□ -0.4
CDHR3-205ENST00000468143 COL9A1P20849 921 aa12.54□□□□□ -0.4
CDHR3-205ENST00000468143 LRPAP1P30533 357 aa12.54□□□□□ -0.4
CDHR3-205ENST00000468143 KRT85P78386 507 aa12.54□□□□□ -0.4
CDHR3-205ENST00000468143 RAB33AQ14088 237 aa12.54□□□□□ -0.4
CDHR3-205ENST00000468143 POSTNQ15063 836 aa12.54□□□□□ -0.4
CDHR3-205ENST00000468143 C15orf39Q6ZRI6 1047 aa12.54□□□□□ -0.4
CDHR3-205ENST00000468143 ANKS3Q6ZW76 656 aa12.54□□□□□ -0.4
CDHR3-205ENST00000468143 CMASQ8NFW8 434 aaPredicted RBP12.54□□□□□ -0.4
CDHR3-205ENST00000468143 HDAC7Q8WUI4 952 aa12.54□□□□□ -0.4
CDHR3-205ENST00000468143 ZNF707Q96C28 371 aaPredicted RBP12.54□□□□□ -0.4
CDHR3-205ENST00000468143 C7orf25Q9BPX7 421 aa12.54□□□□□ -0.4
CDHR3-205ENST00000468143 FBXW11Q9UKB1 542 aa12.54□□□□□ -0.4
CDHR3-205ENST00000468143 KCNH3Q9ULD8 1083 aa12.54□□□□□ -0.4
CDHR3-205ENST00000468143 BACE2Q9Y5Z0 518 aa12.54□□□□□ -0.4
CDHR3-205ENST00000468143 MYH11P35749 1972 aa12.53□□□□□ -0.4
CDHR3-205ENST00000468143 CCL16O15467 120 aa12.53□□□□□ -0.4
CDHR3-205ENST00000468143 ASGR2P07307 311 aa12.53□□□□□ -0.4
CDHR3-205ENST00000468143 C8AP07357 584 aa12.53□□□□□ -0.4
CDHR3-205ENST00000468143 CYP3A5P20815 502 aa12.53□□□□□ -0.4
CDHR3-205ENST00000468143 WNT7BP56706 349 aa12.53□□□□□ -0.4
CDHR3-205ENST00000468143 CUL4BQ13620 913 aa12.53□□□□□ -0.4
CDHR3-205ENST00000468143 BECN1Q14457 450 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms