RNA–Protein interactions for RNA: ENST00000467371.1

SPTBN1-204, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTBN1, Length 3,332 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-204ENST00000467371 CDKL2Q92772 493 aa8.2□□□□□ -1.1
SPTBN1-204ENST00000467371 YME1L1Q96TA2 773 aa8.2□□□□□ -1.1
SPTBN1-204ENST00000467371 ATP6V0BQ99437 205 aa8.2□□□□□ -1.1
SPTBN1-204ENST00000467371 NACAP1Q9BZK3 213 aa8.2□□□□□ -1.1
SPTBN1-204ENST00000467371 UNKQ9C0B0 810 aaKnown RBP8.2□□□□□ -1.1
SPTBN1-204ENST00000467371 UNC93B1Q9H1C4 597 aa8.2□□□□□ -1.1
SPTBN1-204ENST00000467371 C8orf33Q9H7E9 229 aaPredicted RBP8.2□□□□□ -1.1
SPTBN1-204ENST00000467371 L1RE1Q9UN81 338 aa8.2□□□□□ -1.1
SPTBN1-204ENST00000467371 TLR6Q9Y2C9 796 aa8.2□□□□□ -1.1
SPTBN1-204ENST00000467371 CHD2O14647 1828 aaKnown RBP8.2□□□□□ -1.1
SPTBN1-204ENST00000467371 KCNQ3O43525 872 aa8.19□□□□□ -1.1
SPTBN1-204ENST00000467371 TSPAN1O60635 241 aa8.19□□□□□ -1.1
SPTBN1-204ENST00000467371 CSTF2P33240 577 aaKnown RBP eCLIP8.19□□□□□ -1.1
SPTBN1-204ENST00000467371 AFF3P51826 1226 aaKnown RBP8.19□□□□□ -1.1
SPTBN1-204ENST00000467371 TRIM32Q13049 653 aa8.19□□□□□ -1.1
SPTBN1-204ENST00000467371 ANO4Q32M45 955 aa8.19□□□□□ -1.1
SPTBN1-204ENST00000467371 HAUS3Q68CZ6 603 aa8.19□□□□□ -1.1
SPTBN1-204ENST00000467371 IYDQ6PHW0 289 aa8.19□□□□□ -1.1
SPTBN1-204ENST00000467371 CCDC150Q8NCX0 1101 aa8.19□□□□□ -1.1
SPTBN1-204ENST00000467371 FAM13CQ8NE31 585 aa8.19□□□□□ -1.1
SPTBN1-204ENST00000467371 GDAP1Q8TB36 358 aa8.19□□□□□ -1.1
SPTBN1-204ENST00000467371 GAL3ST1Q99999 423 aa8.19□□□□□ -1.1
SPTBN1-204ENST00000467371 UPF3BQ9BZI7 483 aaKnown RBP8.19□□□□□ -1.1
SPTBN1-204ENST00000467371 DMRT3Q9NQL9 472 aa8.19□□□□□ -1.1
SPTBN1-204ENST00000467371 ZNF358Q9NW07 568 aa8.19□□□□□ -1.1
SPTBN1-204ENST00000467371 HDAC6Q9UBN7 1215 aa8.19□□□□□ -1.1
SPTBN1-204ENST00000467371 SALL4Q9UJQ4 1053 aa8.19□□□□□ -1.1
SPTBN1-204ENST00000467371 PNMA3Q9UL41 463 aa8.19□□□□□ -1.1
SPTBN1-204ENST00000467371 CLEC4AQ9UMR7 237 aa8.19□□□□□ -1.1
SPTBN1-204ENST00000467371 USP16Q9Y5T5 823 aa8.19□□□□□ -1.1
SPTBN1-204ENST00000467371 KRT87PA6NCN2 255 aa8.19□□□□□ -1.1
SPTBN1-204ENST00000467371 FSBPO95073 299 aa8.19□□□□□ -1.1
SPTBN1-204ENST00000467371 RPSAP08865 295 aaKnown RBP8.19□□□□□ -1.1
SPTBN1-204ENST00000467371 PYGMP11217 842 aa8.19□□□□□ -1.1
SPTBN1-204ENST00000467371 PLCG2P16885 1265 aa8.19□□□□□ -1.1
SPTBN1-204ENST00000467371 LIG3P49916 1009 aa8.19□□□□□ -1.1
SPTBN1-204ENST00000467371 FUT11Q495W5 492 aa8.19□□□□□ -1.1
SPTBN1-204ENST00000467371 DESI1Q6ICB0 168 aa8.19□□□□□ -1.1
SPTBN1-204ENST00000467371 LYPD8Q6UX82 237 aa8.19□□□□□ -1.1
SPTBN1-204ENST00000467371 MRPL10Q7Z7H8 261 aaKnown RBP8.19□□□□□ -1.1
SPTBN1-204ENST00000467371 CAND1Q86VP6 1230 aaKnown RBP8.19□□□□□ -1.1
SPTBN1-204ENST00000467371 Q8NFD4 153 aa8.19□□□□□ -1.1
SPTBN1-204ENST00000467371 CMTM3Q96MX0 182 aa8.19□□□□□ -1.1
SPTBN1-204ENST00000467371 C7orf26Q96N11 449 aa8.19□□□□□ -1.1
SPTBN1-204ENST00000467371 HGH1Q9BTY7 390 aa8.19□□□□□ -1.1
SPTBN1-204ENST00000467371 EPC1Q9H2F5 836 aa8.19□□□□□ -1.1
SPTBN1-204ENST00000467371 BICC1Q9H694 974 aaKnown RBP8.19□□□□□ -1.1
SPTBN1-204ENST00000467371 PICK1Q9NRD5 415 aa8.19□□□□□ -1.1
SPTBN1-204ENST00000467371 TEKT2Q9UIF3 430 aa8.19□□□□□ -1.1
SPTBN1-204ENST00000467371 MTMR6Q9Y217 621 aa8.19□□□□□ -1.1
SPTBN1-204ENST00000467371 NEO1Q92859 1461 aa8.19□□□□□ -1.1
SPTBN1-204ENST00000467371 NRXN1Q9ULB1 1477 aa8.19□□□□□ -1.1
SPTBN1-204ENST00000467371 ALKQ9UM73 1620 aa8.19□□□□□ -1.1
SPTBN1-204ENST00000467371 SETBP1Q9Y6X0 1596 aa8.19□□□□□ -1.1
SPTBN1-204ENST00000467371 ARHGEF40Q8TER5 1519 aa8.19□□□□□ -1.1
SPTBN1-204ENST00000467371 MYO3BQ8WXR4 1341 aa8.19□□□□□ -1.1
SPTBN1-204ENST00000467371 CD163L1Q9NR16 1453 aa8.19□□□□□ -1.1
SPTBN1-204ENST00000467371 LCHNA4D1U4 455 aa8.19□□□□□ -1.1
SPTBN1-204ENST00000467371 C3orf80F5H4A9 247 aa8.19□□□□□ -1.1
SPTBN1-204ENST00000467371 MAPK13O15264 365 aa8.19□□□□□ -1.1
SPTBN1-204ENST00000467371 MAGEB3O15480 346 aa8.19□□□□□ -1.1
SPTBN1-204ENST00000467371 B4GALT4O60513 344 aa8.19□□□□□ -1.1
SPTBN1-204ENST00000467371 VAV1P15498 845 aa8.19□□□□□ -1.1
SPTBN1-204ENST00000467371 NF2P35240 595 aa8.19□□□□□ -1.1
SPTBN1-204ENST00000467371 CASP5P51878 434 aa8.19□□□□□ -1.1
SPTBN1-204ENST00000467371 ACTN3Q08043 901 aaPredicted RBP8.19□□□□□ -1.1
SPTBN1-204ENST00000467371 ZNF460Q14592 562 aa8.19□□□□□ -1.1
SPTBN1-204ENST00000467371 LASP1Q14847 261 aaKnown RBP8.19□□□□□ -1.1
SPTBN1-204ENST00000467371 DCLRE1AQ6PJP8 1040 aa8.19□□□□□ -1.1
SPTBN1-204ENST00000467371 RDH13Q8NBN7 331 aa8.19□□□□□ -1.1
SPTBN1-204ENST00000467371 C3orf58Q8NDZ4 430 aa8.19□□□□□ -1.1
SPTBN1-204ENST00000467371 RUBCNQ92622 972 aa8.19□□□□□ -1.1
SPTBN1-204ENST00000467371 KRT35Q92764 455 aa8.19□□□□□ -1.1
SPTBN1-204ENST00000467371 RNF38Q9H0F5 515 aa8.19□□□□□ -1.1
SPTBN1-204ENST00000467371 NSRP1Q9H0G5 558 aaKnown RBP8.19□□□□□ -1.1
SPTBN1-204ENST00000467371 SEMA6BQ9H3T3 888 aa8.19□□□□□ -1.1
SPTBN1-204ENST00000467371 NMRK1Q9NWW6 199 aa8.19□□□□□ -1.1
SPTBN1-204ENST00000467371 MALT1Q9UDY8 824 aa8.19□□□□□ -1.1
SPTBN1-204ENST00000467371 MRFAP1Q9Y605 127 aa8.19□□□□□ -1.1
SPTBN1-204ENST00000467371 FAM169AQ9Y6X4 670 aa8.19□□□□□ -1.1
SPTBN1-204ENST00000467371 PASKQ96RG2 1323 aa8.18□□□□□ -1.1
SPTBN1-204ENST00000467371 PPLO60437 1756 aa8.18□□□□□ -1.1
SPTBN1-204ENST00000467371 C16orf96A6NNT2 1141 aa8.18□□□□□ -1.1
SPTBN1-204ENST00000467371 N4BP1O75113 896 aaKnown RBP8.18□□□□□ -1.1
SPTBN1-204ENST00000467371 KCNH1O95259 989 aa8.18□□□□□ -1.1
SPTBN1-204ENST00000467371 F12P00748 615 aaPredicted RBP8.18□□□□□ -1.1
SPTBN1-204ENST00000467371 PF4P02776 101 aa8.18□□□□□ -1.1
SPTBN1-204ENST00000467371 MSH2P43246 934 aa8.18□□□□□ -1.1
SPTBN1-204ENST00000467371 AP3M2P53677 418 aa8.18□□□□□ -1.1
SPTBN1-204ENST00000467371 PPIDQ08752 370 aaKnown RBP8.18□□□□□ -1.1
SPTBN1-204ENST00000467371 KIF5AQ12840 1032 aa8.18□□□□□ -1.1
SPTBN1-204ENST00000467371 GRSF1Q12849 480 aaKnown RBP eCLIP8.18□□□□□ -1.16e-16■□□□□ 8.7
SPTBN1-204ENST00000467371 BFSP1Q12934 665 aa8.18□□□□□ -1.1
SPTBN1-204ENST00000467371 KLF1Q13351 362 aaPredicted RBP8.18□□□□□ -1.1
SPTBN1-204ENST00000467371 HHIPL2Q6UWX4 724 aa8.18□□□□□ -1.1
SPTBN1-204ENST00000467371 ZNF600Q6ZNG1 722 aa8.18□□□□□ -1.1
SPTBN1-204ENST00000467371 SEPT14Q6ZU15 432 aa8.18□□□□□ -1.1
SPTBN1-204ENST00000467371 TTC6Q86TZ1 520 aa8.18□□□□□ -1.1
SPTBN1-204ENST00000467371 WDR49Q8IV35 697 aa8.18□□□□□ -1.1
SPTBN1-204ENST00000467371 NKAIN4Q8IVV8 208 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms