RNA–Protein interactions for RNA: ENST00000466708.5

CCDC78-207, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,847 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-207ENST00000466708 PTPROQ16827 1216 aa21.94■■□□□ 1.1
CCDC78-207ENST00000466708 MTHFD1LQ6UB35 978 aa21.94■■□□□ 1.1
CCDC78-207ENST00000466708 THNSL1Q8IYQ7 743 aa21.94■■□□□ 1.1
CCDC78-207ENST00000466708 OR6J1Q8NGC5 347 aa21.94■■□□□ 1.1
CCDC78-207ENST00000466708 NPLOC4Q8TAT6 608 aa21.94■■□□□ 1.1
CCDC78-207ENST00000466708 FAM212AQ96EL1 285 aa21.94■■□□□ 1.1
CCDC78-207ENST00000466708 NAP1L3Q99457 506 aaPredicted RBP21.94■■□□□ 1.1
CCDC78-207ENST00000466708 ACBD3Q9H3P7 528 aa21.94■■□□□ 1.1
CCDC78-207ENST00000466708 VIPAS39Q9H9C1 493 aa21.94■■□□□ 1.1
CCDC78-207ENST00000466708 ZHX1Q9UKY1 873 aaPredicted RBP21.94■■□□□ 1.1
CCDC78-207ENST00000466708 AKT3Q9Y243 479 aa21.94■■□□□ 1.1
CCDC78-207ENST00000466708 B4GALT5O43286 388 aa21.94■■□□□ 1.1
CCDC78-207ENST00000466708 ZEB2O60315 1214 aa21.94■■□□□ 1.1
CCDC78-207ENST00000466708 HOXC6P09630 235 aa21.94■■□□□ 1.1
CCDC78-207ENST00000466708 RNASE9P60153 205 aaKnown RBP21.94■■□□□ 1.1
CCDC78-207ENST00000466708 TMEM270Q6UE05 265 aa21.94■■□□□ 1.1
CCDC78-207ENST00000466708 IFT20Q8IY31 132 aa21.94■■□□□ 1.1
CCDC78-207ENST00000466708 UBL4BQ8N7F7 174 aa21.94■■□□□ 1.1
CCDC78-207ENST00000466708 ZNF564Q8TBZ8 553 aaPredicted RBP21.94■■□□□ 1.1
CCDC78-207ENST00000466708 ZBTB10Q96DT7 871 aa21.94■■□□□ 1.1
CCDC78-207ENST00000466708 ANKRD36BP1Q96IX9 119 aa21.94■■□□□ 1.1
CCDC78-207ENST00000466708 ZNF668Q96K58 619 aaPredicted RBP21.94■■□□□ 1.1
CCDC78-207ENST00000466708 KRT12Q99456 494 aa21.94■■□□□ 1.1
CCDC78-207ENST00000466708 NUP85Q9BW27 656 aa21.94■■□□□ 1.1
CCDC78-207ENST00000466708 MTMR12Q9C0I1 747 aa21.94■■□□□ 1.1
CCDC78-207ENST00000466708 CDT1Q9H211 546 aa21.94■■□□□ 1.1
CCDC78-207ENST00000466708 A0A087WZ62 844 aa21.93■■□□□ 1.1
CCDC78-207ENST00000466708 MANSC4A6NHS7 340 aaPredicted RBP21.93■■□□□ 1.1
CCDC78-207ENST00000466708 CST3P01034 146 aaPredicted RBP21.93■■□□□ 1.1
CCDC78-207ENST00000466708 CYP1A1P04798 512 aaPredicted RBP21.93■■□□□ 1.1
CCDC78-207ENST00000466708 TMEM191BP0C7N4 346 aa21.93■■□□□ 1.1
CCDC78-207ENST00000466708 MCF2P10911 925 aa21.93■■□□□ 1.1
CCDC78-207ENST00000466708 SLC7A5Q01650 507 aa21.93■■□□□ 1.1
CCDC78-207ENST00000466708 TRPC3Q13507 836 aa21.93■■□□□ 1.1
CCDC78-207ENST00000466708 SMC1AQ14683 1233 aaKnown RBP21.93■■□□□ 1.1
CCDC78-207ENST00000466708 KYAT1Q16773 422 aa21.93■■□□□ 1.1
CCDC78-207ENST00000466708 EEF1DP3Q658K8 133 aa21.93■■□□□ 1.1
CCDC78-207ENST00000466708 FDXACB1Q9BRP7 624 aaPredicted RBP21.93■■□□□ 1.1
CCDC78-207ENST00000466708 RPF1Q9H9Y2 349 aaKnown RBP21.93■■□□□ 1.1
CCDC78-207ENST00000466708 AVENQ9NQS1 362 aaPredicted RBP21.93■■□□□ 1.1
CCDC78-207ENST00000466708 TNNC2P02585 160 aa21.92■■□□□ 1.1
CCDC78-207ENST00000466708 PPFIA1Q13136 1202 aa21.92■■□□□ 1.1
CCDC78-207ENST00000466708 GRIK4Q16099 956 aa21.92■■□□□ 1.1
CCDC78-207ENST00000466708 MORN1Q5T089 497 aa21.92■■□□□ 1.1
CCDC78-207ENST00000466708 UBR7Q8N806 425 aa21.92■■□□□ 1.1
CCDC78-207ENST00000466708 RBBP8NLQ8NC74 664 aaPredicted RBP21.92■■□□□ 1.1
CCDC78-207ENST00000466708 AENQ8WTP8 325 aaKnown RBP21.92■■□□□ 1.1
CCDC78-207ENST00000466708 WNT8AQ9H1J5 351 aa21.92■■□□□ 1.1
CCDC78-207ENST00000466708 CNOT8Q9UFF9 292 aaKnown RBP21.92■■□□□ 1.1
CCDC78-207ENST00000466708 A0A0U1RQG5 324 aaPredicted RBP21.92■■□□□ 1.1
CCDC78-207ENST00000466708 RRN3P2A6NIE6 340 aa21.92■■□□□ 1.1
CCDC78-207ENST00000466708 KRIT1O00522 736 aa21.92■■□□□ 1.1
CCDC78-207ENST00000466708 CLSTN1O94985 981 aa21.92■■□□□ 1.1
CCDC78-207ENST00000466708 IQCF3P0C7M6 154 aa21.92■■□□□ 1.1
CCDC78-207ENST00000466708 GNA15P30679 374 aa21.92■■□□□ 1.1
CCDC78-207ENST00000466708 CENPCQ03188 943 aa21.92■■□□□ 1.1
CCDC78-207ENST00000466708 MAP2K5Q13163 448 aa21.92■■□□□ 1.1
CCDC78-207ENST00000466708 AMHR2Q16671 573 aa21.92■■□□□ 1.1
CCDC78-207ENST00000466708 MCOLN2Q8IZK6 566 aa21.92■■□□□ 1.1
CCDC78-207ENST00000466708 NIF3L1Q9GZT8 377 aa21.92■■□□□ 1.1
CCDC78-207ENST00000466708 GDF3Q9NR23 364 aa21.92■■□□□ 1.1
CCDC78-207ENST00000466708 CPA4Q9UI42 421 aa21.92■■□□□ 1.1
CCDC78-207ENST00000466708 ITGBL1O95965 494 aaPredicted RBP21.91■■□□□ 1.1
CCDC78-207ENST00000466708 MYBL2P10244 700 aa21.91■■□□□ 1.1
CCDC78-207ENST00000466708 NSFP46459 744 aaKnown RBP21.91■■□□□ 1.1
CCDC78-207ENST00000466708 ZNF132P52740 706 aa21.91■■□□□ 1.1
CCDC78-207ENST00000466708 TFAMQ00059 246 aaKnown RBP21.91■■□□□ 1.1
CCDC78-207ENST00000466708 MESDQ14696 234 aa21.91■■□□□ 1.1
CCDC78-207ENST00000466708 PPP2R5EQ16537 467 aa21.91■■□□□ 1.1
CCDC78-207ENST00000466708 FAXDC2Q96IV6 333 aa21.91■■□□□ 1.1
CCDC78-207ENST00000466708 VCPIP1Q96JH7 1222 aa21.91■■□□□ 1.1
CCDC78-207ENST00000466708 TRPM7Q96QT4 1865 aa21.91■■□□□ 1.1
CCDC78-207ENST00000466708 UMODL1Q5DID0 1318 aa21.9■■□□□ 1.1
CCDC78-207ENST00000466708 ATMINO43313 823 aaPredicted RBP21.9■■□□□ 1.1
CCDC78-207ENST00000466708 HEXIM1O94992 359 aaKnown RBP21.9■■□□□ 1.1
CCDC78-207ENST00000466708 EPHB4P54760 987 aa21.9■■□□□ 1.1
CCDC78-207ENST00000466708 MYL6P60660 151 aa21.9■■□□□ 1.1
CCDC78-207ENST00000466708 EMBQ6PCB8 327 aa21.9■■□□□ 1.1
CCDC78-207ENST00000466708 ZNF410Q86VK4 478 aa21.9■■□□□ 1.1
CCDC78-207ENST00000466708 RASAL3Q86YV0 1011 aa21.9■■□□□ 1.1
CCDC78-207ENST00000466708 ZSWIM1Q9BR11 485 aa21.9■■□□□ 1.1
CCDC78-207ENST00000466708 KAT6AQ92794 2004 aa21.9■■□□□ 1.1
CCDC78-207ENST00000466708 ANK1P16157 1881 aa21.9■■□□□ 1.1
CCDC78-207ENST00000466708 FAM170AA1A519 330 aa21.9■■□□□ 1.1
CCDC78-207ENST00000466708 A6NJR5 290 aa21.9■■□□□ 1.1
CCDC78-207ENST00000466708 VTNP04004 478 aa21.9■■□□□ 1.1
CCDC78-207ENST00000466708 COMTP21964 271 aa21.9■■□□□ 1.1
CCDC78-207ENST00000466708 TNNT3P45378 269 aaPredicted RBP21.9■■□□□ 1.1
CCDC78-207ENST00000466708 ZNF157P51786 506 aaPredicted RBP21.9■■□□□ 1.1
CCDC78-207ENST00000466708 GABPB1Q06547 395 aaPredicted RBP21.9■■□□□ 1.1
CCDC78-207ENST00000466708 MARCH8Q5T0T0 291 aa21.9■■□□□ 1.1
CCDC78-207ENST00000466708 DCAF12L1Q5VU92 463 aa21.9■■□□□ 1.1
CCDC78-207ENST00000466708 EFCAB13Q8IY85 973 aa21.9■■□□□ 1.1
CCDC78-207ENST00000466708 RNPC3Q96LT9 517 aaKnown RBP21.9■■□□□ 1.1
CCDC78-207ENST00000466708 SLITRK6Q9H5Y7 841 aa21.9■■□□□ 1.1
CCDC78-207ENST00000466708 CCDC66A2RUB6 948 aa21.89■■□□□ 1.09
CCDC78-207ENST00000466708 GPR25O00155 361 aa21.89■■□□□ 1.09
CCDC78-207ENST00000466708 FGGP02679 453 aa21.89■■□□□ 1.09
CCDC78-207ENST00000466708 GLI1P08151 1106 aa21.89■■□□□ 1.09
CCDC78-207ENST00000466708 CTNNA2P26232 953 aa21.89■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms