RNA–Protein interactions for RNA: ENST00000466624.1

GPC1-207, Transcript of glypican 1, humanhuman

TSL 2

Gene GPC1, Length 782 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-207ENST00000466624 TUBGCP4Q9UGJ1 667 aa17.31■□□□□ 0.36
GPC1-207ENST00000466624 ARMCX3Q9UH62 379 aaPredicted RBP17.31■□□□□ 0.36
GPC1-207ENST00000466624 FAN1Q9Y2M0 1017 aa17.31■□□□□ 0.36
GPC1-207ENST00000466624 LAMA2P24043 3122 aaKnown RBP17.31■□□□□ 0.36
GPC1-207ENST00000466624 PLXNA4Q9HCM2 1894 aa17.31■□□□□ 0.36
GPC1-207ENST00000466624 PTPRJQ12913 1337 aa17.3■□□□□ 0.36
GPC1-207ENST00000466624 NRP1O14786 923 aa17.3■□□□□ 0.36
GPC1-207ENST00000466624 STX10O60499 249 aa17.3■□□□□ 0.36
GPC1-207ENST00000466624 TNNC2P02585 160 aa17.3■□□□□ 0.36
GPC1-207ENST00000466624 DLATP10515 647 aaKnown RBP17.3■□□□□ 0.36
GPC1-207ENST00000466624 GTF2H1P32780 548 aa17.3■□□□□ 0.36
GPC1-207ENST00000466624 OR1G1P47890 313 aa17.3■□□□□ 0.36
GPC1-207ENST00000466624 ZNF445P59923 1031 aa17.3■□□□□ 0.36
GPC1-207ENST00000466624 TFAMQ00059 246 aaKnown RBP17.3■□□□□ 0.36
GPC1-207ENST00000466624 UPP1Q16831 310 aa17.3■□□□□ 0.36
GPC1-207ENST00000466624 CCDC40Q4G0X9 1142 aa17.3■□□□□ 0.36
GPC1-207ENST00000466624 HABP4Q5JVS0 413 aaKnown RBP17.3■□□□□ 0.36
GPC1-207ENST00000466624 GPR153Q6NV75 609 aa17.3■□□□□ 0.36
GPC1-207ENST00000466624 LRSAM1Q6UWE0 723 aa17.3■□□□□ 0.36
GPC1-207ENST00000466624 SLC39A11Q8N1S5 342 aa17.3■□□□□ 0.36
GPC1-207ENST00000466624 COLEC11Q9BWP8 271 aa17.3■□□□□ 0.36
GPC1-207ENST00000466624 GOLGA2P5Q9HBQ8 144 aa17.3■□□□□ 0.36
GPC1-207ENST00000466624 DPP3Q9NY33 737 aa17.3■□□□□ 0.36
GPC1-207ENST00000466624 STK39Q9UEW8 545 aa17.3■□□□□ 0.36
GPC1-207ENST00000466624 ITGA11Q9UKX5 1188 aa17.3■□□□□ 0.36
GPC1-207ENST00000466624 NFE2L3Q9Y4A8 694 aa17.3■□□□□ 0.36
GPC1-207ENST00000466624 ANO9A1A5B4 782 aa17.29■□□□□ 0.36
GPC1-207ENST00000466624 CASTOR2A6NHX0 329 aa17.29■□□□□ 0.36
GPC1-207ENST00000466624 SOX1O00570 391 aaPredicted RBP17.29■□□□□ 0.36
GPC1-207ENST00000466624 PODXLO00592 558 aa17.29■□□□□ 0.36
GPC1-207ENST00000466624 PAX3P23760 479 aa17.29■□□□□ 0.36
GPC1-207ENST00000466624 CTNNB1P35222 781 aa17.29■□□□□ 0.36
GPC1-207ENST00000466624 ZNF165P49910 485 aa17.29■□□□□ 0.36
GPC1-207ENST00000466624 CLCNKBP51801 687 aa17.29■□□□□ 0.36
GPC1-207ENST00000466624 DLG4P78352 724 aa17.29■□□□□ 0.36
GPC1-207ENST00000466624 PLCB3Q01970 1234 aa17.29■□□□□ 0.36
GPC1-207ENST00000466624 EPC2Q52LR7 807 aa17.29■□□□□ 0.36
GPC1-207ENST00000466624 C1orf220Q5T0J3 134 aa17.29■□□□□ 0.36
GPC1-207ENST00000466624 DCLRE1AQ6PJP8 1040 aa17.29■□□□□ 0.36
GPC1-207ENST00000466624 IRF2BP1Q8IU81 584 aa17.29■□□□□ 0.36
GPC1-207ENST00000466624 TRIM59Q8IWR1 403 aa17.29■□□□□ 0.36
GPC1-207ENST00000466624 OR5B17Q8NGF7 314 aa17.29■□□□□ 0.36
GPC1-207ENST00000466624 CNOT6LQ96LI5 555 aaKnown RBP17.29■□□□□ 0.36
GPC1-207ENST00000466624 C17orf80Q9BSJ5 609 aa17.29■□□□□ 0.36
GPC1-207ENST00000466624 MTMR12Q9C0I1 747 aa17.29■□□□□ 0.36
GPC1-207ENST00000466624 SPG21Q9NZD8 308 aa17.29■□□□□ 0.36
GPC1-207ENST00000466624 SCN1AP35498 2009 aa17.29■□□□□ 0.36
GPC1-207ENST00000466624 COL4A4P53420 1690 aaPredicted RBP17.29■□□□□ 0.36
GPC1-207ENST00000466624 SMTNL1A8MU46 457 aa17.28■□□□□ 0.36
GPC1-207ENST00000466624 PIRO00625 290 aa17.28■□□□□ 0.36
GPC1-207ENST00000466624 NCAPHQ15003 741 aa17.28■□□□□ 0.36
GPC1-207ENST00000466624 CDKAL1Q5VV42 579 aa17.28■□□□□ 0.36
GPC1-207ENST00000466624 C9orf57Q5W0N0 161 aa17.28■□□□□ 0.36
GPC1-207ENST00000466624 LMBRD2Q68DH5 695 aaPredicted RBP17.28■□□□□ 0.36
GPC1-207ENST00000466624 C15orf39Q6ZRI6 1047 aa17.28■□□□□ 0.36
GPC1-207ENST00000466624 C1orf127Q8N9H9 656 aa17.28■□□□□ 0.36
GPC1-207ENST00000466624 CXorf38Q8TB03 319 aa17.28■□□□□ 0.36
GPC1-207ENST00000466624 ZNF516Q92618 1163 aa17.28■□□□□ 0.36
GPC1-207ENST00000466624 SLC35C1Q96A29 364 aa17.28■□□□□ 0.36
GPC1-207ENST00000466624 IGSF21Q96ID5 467 aa17.28■□□□□ 0.36
GPC1-207ENST00000466624 POP1Q99575 1024 aaKnown RBP17.28■□□□□ 0.36
GPC1-207ENST00000466624 PAAF1Q9BRP4 392 aa17.28■□□□□ 0.36
GPC1-207ENST00000466624 C11orf84Q9BUA3 381 aaPredicted RBP17.28■□□□□ 0.36
GPC1-207ENST00000466624 MARCH5Q9NX47 278 aa17.28■□□□□ 0.36
GPC1-207ENST00000466624 LZTS1Q9Y250 596 aa17.28■□□□□ 0.36
GPC1-207ENST00000466624 KIF4AO95239 1232 aa17.27■□□□□ 0.36
GPC1-207ENST00000466624 EFEMP2O95967 443 aa17.27■□□□□ 0.36
GPC1-207ENST00000466624 C4BPAP04003 597 aaKnown RBP17.27■□□□□ 0.36
GPC1-207ENST00000466624 EEF1GP26641 437 aaKnown RBP17.27■□□□□ 0.36
GPC1-207ENST00000466624 PBX3P40426 434 aa17.27■□□□□ 0.36
GPC1-207ENST00000466624 PNPLA4P41247 253 aa17.27■□□□□ 0.36
GPC1-207ENST00000466624 UBE3AQ05086 875 aa17.27■□□□□ 0.36
GPC1-207ENST00000466624 ZACNQ401N2 412 aa17.27■□□□□ 0.36
GPC1-207ENST00000466624 TRAPPC11Q7Z392 1133 aa17.27■□□□□ 0.36
GPC1-207ENST00000466624 DHX40Q8IX18 779 aaKnown RBP17.27■□□□□ 0.36
GPC1-207ENST00000466624 AOPEPQ8N6M6 819 aa17.27■□□□□ 0.36
GPC1-207ENST00000466624 LRRC52Q8N7C0 313 aa17.27■□□□□ 0.36
GPC1-207ENST00000466624 FBXO22Q8NEZ5 403 aa17.27■□□□□ 0.36
GPC1-207ENST00000466624 TMEM169Q96HH4 297 aa17.27■□□□□ 0.36
GPC1-207ENST00000466624 ANP32EQ9BTT0 268 aa17.27■□□□□ 0.36
GPC1-207ENST00000466624 ZNF576Q9H609 170 aa17.27■□□□□ 0.36
GPC1-207ENST00000466624 TMEM8AQ9HCN3 771 aa17.27■□□□□ 0.36
GPC1-207ENST00000466624 SAMSN1Q9NSI8 373 aaKnown RBP17.27■□□□□ 0.36
GPC1-207ENST00000466624 ADAM28Q9UKQ2 775 aa17.27■□□□□ 0.36
GPC1-207ENST00000466624 PRG3Q9Y2Y8 225 aaPredicted RBP17.27■□□□□ 0.36
GPC1-207ENST00000466624 CHD9Q3L8U1 2897 aa17.26■□□□□ 0.35
GPC1-207ENST00000466624 NT5C1B-RDH14C9J2C7 533 aa17.26■□□□□ 0.35
GPC1-207ENST00000466624 H3BNC9 293 aa17.26■□□□□ 0.35
GPC1-207ENST00000466624 PMM2O15305 246 aa17.26■□□□□ 0.35
GPC1-207ENST00000466624 FGF18O76093 207 aa17.26■□□□□ 0.35
GPC1-207ENST00000466624 B3GAT3O94766 335 aa17.26■□□□□ 0.35
GPC1-207ENST00000466624 ITGB3P05106 788 aa17.26■□□□□ 0.35
GPC1-207ENST00000466624 TRIM49P0CI25 452 aa17.26■□□□□ 0.35
GPC1-207ENST00000466624 TRIM49CP0CI26 452 aa17.26■□□□□ 0.35
GPC1-207ENST00000466624 PRKCSHP14314 528 aaPredicted RBP17.26■□□□□ 0.35
GPC1-207ENST00000466624 GUCY2FP51841 1108 aa17.26■□□□□ 0.35
GPC1-207ENST00000466624 RBP5P82980 135 aa17.26■□□□□ 0.35
GPC1-207ENST00000466624 KRT17Q04695 432 aa17.26■□□□□ 0.35
GPC1-207ENST00000466624 PPP3CAQ08209 521 aa17.26■□□□□ 0.35
GPC1-207ENST00000466624 ELAVL2Q12926 359 aaKnown RBP17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms