RNA–Protein interactions for RNA: ENST00000466274.1

NCL-208, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 671 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-208ENST00000466274 MCCP23508 829 aa6.82□□□□□ -1.32
NCL-208ENST00000466274 RARSP54136 660 aaKnown RBP6.82□□□□□ -1.32
NCL-208ENST00000466274 STXBP2Q15833 593 aa6.82□□□□□ -1.32
NCL-208ENST00000466274 MEI1Q5TIA1 1274 aa6.82□□□□□ -1.32
NCL-208ENST00000466274 PLPP4Q5VZY2 271 aa6.82□□□□□ -1.32
NCL-208ENST00000466274 SLC6A19Q695T7 634 aa6.82□□□□□ -1.32
NCL-208ENST00000466274 RCSD1Q6JBY9 416 aa6.82□□□□□ -1.32
NCL-208ENST00000466274 KIAA1841Q6NSI8 718 aa6.82□□□□□ -1.32
NCL-208ENST00000466274 FAM43BQ6ZT52 329 aaPredicted RBP6.82□□□□□ -1.32
NCL-208ENST00000466274 DNAJB8Q8NHS0 232 aa6.82□□□□□ -1.32
NCL-208ENST00000466274 ZSCAN18Q8TBC5 510 aaPredicted RBP6.82□□□□□ -1.32
NCL-208ENST00000466274 CEP95Q96GE4 821 aa6.82□□□□□ -1.32
NCL-208ENST00000466274 SHDQ96IW2 340 aa6.82□□□□□ -1.32
NCL-208ENST00000466274 Q96M66 194 aa6.82□□□□□ -1.32
NCL-208ENST00000466274 FTHL17Q9BXU8 183 aa6.82□□□□□ -1.32
NCL-208ENST00000466274 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.82□□□□□ -1.32
NCL-208ENST00000466274 MAF1Q9H063 256 aa6.82□□□□□ -1.32
NCL-208ENST00000466274 CCDC8Q9H0W5 538 aaPredicted RBP6.82□□□□□ -1.32
NCL-208ENST00000466274 MIR1-1HGQ9H1L0 117 aa6.82□□□□□ -1.32
NCL-208ENST00000466274 DUSP15Q9H1R2 295 aaPredicted RBP6.82□□□□□ -1.32
NCL-208ENST00000466274 EPC1Q9H2F5 836 aa6.82□□□□□ -1.32
NCL-208ENST00000466274 TBC1D17Q9HA65 648 aa6.82□□□□□ -1.32
NCL-208ENST00000466274 ZSCAN32Q9NX65 697 aa6.82□□□□□ -1.32
NCL-208ENST00000466274 TLR6Q9Y2C9 796 aa6.82□□□□□ -1.32
NCL-208ENST00000466274 SLC4A4Q9Y6R1 1079 aa6.82□□□□□ -1.32
NCL-208ENST00000466274 SCN10AQ9Y5Y9 1956 aa6.82□□□□□ -1.32
NCL-208ENST00000466274 TET1Q8NFU7 2136 aa6.82□□□□□ -1.32
NCL-208ENST00000466274 IGKV6D-41A0A0C4DH26 115 aa6.81□□□□□ -1.32
NCL-208ENST00000466274 LOC105378220A0A1B0GUY1 285 aaPredicted RBP6.81□□□□□ -1.32
NCL-208ENST00000466274 KRTAP9-7A8MTY7 169 aa6.81□□□□□ -1.32
NCL-208ENST00000466274 NFIBO00712 420 aa6.81□□□□□ -1.32
NCL-208ENST00000466274 SURF6O75683 361 aaKnown RBP6.81□□□□□ -1.32
NCL-208ENST00000466274 TSPY3P0CV98 308 aa6.81□□□□□ -1.32
NCL-208ENST00000466274 TSPY8P0CW00 308 aa6.81□□□□□ -1.32
NCL-208ENST00000466274 GHRP10912 638 aa6.81□□□□□ -1.32
NCL-208ENST00000466274 TRHRP34981 398 aaPredicted RBP6.81□□□□□ -1.32
NCL-208ENST00000466274 SNAP25P60880 206 aa6.81□□□□□ -1.32
NCL-208ENST00000466274 RPS6P62753 249 aaKnown RBP6.81□□□□□ -1.32
NCL-208ENST00000466274 KRT17Q04695 432 aa6.81□□□□□ -1.32
NCL-208ENST00000466274 PAN2Q504Q3 1202 aaKnown RBP6.81□□□□□ -1.32
NCL-208ENST00000466274 KCNV1Q6PIU1 500 aa6.81□□□□□ -1.32
NCL-208ENST00000466274 UNQ6494/PRO21346Q6UXR6 183 aa6.81□□□□□ -1.32
NCL-208ENST00000466274 SLC30A10Q6XR72 485 aa6.81□□□□□ -1.32
NCL-208ENST00000466274 CCDC149Q6ZUS6 474 aa6.81□□□□□ -1.32
NCL-208ENST00000466274 RASGRP2Q7LDG7 609 aa6.81□□□□□ -1.32
NCL-208ENST00000466274 TMPRSS7Q7RTY8 843 aa6.81□□□□□ -1.32
NCL-208ENST00000466274 MCATQ8IVS2 390 aaKnown RBP6.81□□□□□ -1.32
NCL-208ENST00000466274 RGS22Q8NE09 1264 aa6.81□□□□□ -1.32
NCL-208ENST00000466274 PIWIL2Q8TC59 973 aaKnown RBP6.81□□□□□ -1.32
NCL-208ENST00000466274 NSUN6Q8TEA1 469 aaKnown RBP6.81□□□□□ -1.32
NCL-208ENST00000466274 SPATA33Q96N06 139 aa6.81□□□□□ -1.32
NCL-208ENST00000466274 IWS1Q96ST2 819 aa6.81□□□□□ -1.32
NCL-208ENST00000466274 TCF25Q9BQ70 676 aa6.81□□□□□ -1.32
NCL-208ENST00000466274 RANBP17Q9H2T7 1088 aaKnown RBP6.81□□□□□ -1.32
NCL-208ENST00000466274 SPATA6Q9NWH7 488 aaPredicted RBP6.81□□□□□ -1.32
NCL-208ENST00000466274 DDX41Q9UJV9 622 aaKnown RBP6.81□□□□□ -1.32
NCL-208ENST00000466274 TMEM59LQ9UK28 342 aa6.81□□□□□ -1.32
NCL-208ENST00000466274 CEP131Q9UPN4 1083 aa6.81□□□□□ -1.32
NCL-208ENST00000466274 MRVI1Q9Y6F6 885 aa6.81□□□□□ -1.32
NCL-208ENST00000466274 PNMA6EA0A0J9YXQ4 647 aa6.8□□□□□ -1.32
NCL-208ENST00000466274 TCRBV5S4A2TA0A5A2 114 aa6.8□□□□□ -1.32
NCL-208ENST00000466274 EIF4E1BA6NMX2 242 aaKnown RBP6.8□□□□□ -1.32
NCL-208ENST00000466274 NPIPB6E9PJ23 425 aa6.8□□□□□ -1.32
NCL-208ENST00000466274 EIF3JO75822 258 aaKnown RBP6.8□□□□□ -1.32
NCL-208ENST00000466274 RPLP2P05387 115 aaKnown RBP6.8□□□□□ -1.32
NCL-208ENST00000466274 TMEM253P0C7T8 217 aa6.8□□□□□ -1.32
NCL-208ENST00000466274 SMIM10L2AP0DMW4 78 aa6.8□□□□□ -1.32
NCL-208ENST00000466274 SMIM10L2BP0DMW5 78 aa6.8□□□□□ -1.32
NCL-208ENST00000466274 ZSCAN22P10073 491 aaPredicted RBP6.8□□□□□ -1.32
NCL-208ENST00000466274 LAG3P18627 525 aa6.8□□□□□ -1.32
NCL-208ENST00000466274 TPP2P29144 1249 aaPredicted RBP6.8□□□□□ -1.32
NCL-208ENST00000466274 HOXC8P31273 242 aa6.8□□□□□ -1.32
NCL-208ENST00000466274 ETV3P41162 512 aa6.8□□□□□ -1.32
NCL-208ENST00000466274 MAGEA9P43362 315 aa6.8□□□□□ -1.32
NCL-208ENST00000466274 CSTF1Q05048 431 aaKnown RBP6.8□□□□□ -1.32
NCL-208ENST00000466274 TSNAXIP1Q2TAA8 658 aa6.8□□□□□ -1.32
NCL-208ENST00000466274 SBK1Q52WX2 424 aa6.8□□□□□ -1.32
NCL-208ENST00000466274 RARS2Q5T160 578 aaKnown RBP6.8□□□□□ -1.32
NCL-208ENST00000466274 N4BP2L1Q5TBK1 243 aaPredicted RBP6.8□□□□□ -1.32
NCL-208ENST00000466274 TAF2Q6P1X5 1199 aa6.8□□□□□ -1.32
NCL-208ENST00000466274 GIMAP6Q6P9H5 292 aa6.8□□□□□ -1.32
NCL-208ENST00000466274 TSHZ1Q6ZSZ6 1077 aa6.8□□□□□ -1.32
NCL-208ENST00000466274 KCTD1Q719H9 257 aa6.8□□□□□ -1.32
NCL-208ENST00000466274 MRPS27Q92552 414 aaKnown RBP6.8□□□□□ -1.32
NCL-208ENST00000466274 FAM126AQ9BYI3 521 aaPredicted RBP6.8□□□□□ -1.32
NCL-208ENST00000466274 EPB41L4BQ9H329 900 aa6.8□□□□□ -1.32
NCL-208ENST00000466274 EHMT1Q9H9B1 1298 aa6.8□□□□□ -1.32
NCL-208ENST00000466274 DLGAP2Q9P1A6 1054 aa6.8□□□□□ -1.32
NCL-208ENST00000466274 NOB1Q9ULX3 412 aaKnown RBP6.8□□□□□ -1.32
NCL-208ENST00000466274 CA14Q9ULX7 337 aa6.8□□□□□ -1.32
NCL-208ENST00000466274 CORINQ9Y5Q5 1042 aa6.8□□□□□ -1.32
NCL-208ENST00000466274 FOCADQ5VW36 1801 aa6.8□□□□□ -1.32
NCL-208ENST00000466274 SETXQ7Z333 2677 aaKnown RBP6.8□□□□□ -1.32
NCL-208ENST00000466274 SPTBN2O15020 2390 aa6.8□□□□□ -1.32
NCL-208ENST00000466274 FRYLO94915 3013 aa6.79□□□□□ -1.32
NCL-208ENST00000466274 FLNBO75369 2602 aaKnown RBP6.79□□□□□ -1.32
NCL-208ENST00000466274 MINDY4BA8MYZ0 360 aa6.79□□□□□ -1.32
NCL-208ENST00000466274 UPK3BL1B0FP48 263 aa6.79□□□□□ -1.32
NCL-208ENST00000466274 UPK3BL2E5RIL1 263 aa6.79□□□□□ -1.32
NCL-208ENST00000466274 GOLIM4O00461 696 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms