RNA–Protein interactions for RNA: ENST00000466100.1

VCP-204, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 508 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-204ENST00000466100 SV2AQ7L0J3 742 aa12.05□□□□□ -0.48
VCP-204ENST00000466100 TRAPPC11Q7Z392 1133 aa12.05□□□□□ -0.48
VCP-204ENST00000466100 PHOSPHO2Q8TCD6 241 aa12.05□□□□□ -0.48
VCP-204ENST00000466100 NAP1L5Q96NT1 182 aaPredicted RBP12.05□□□□□ -0.48
VCP-204ENST00000466100 VPS16Q9H269 839 aa12.05□□□□□ -0.48
VCP-204ENST00000466100 PRO3102Q9H379 93 aa12.05□□□□□ -0.48
VCP-204ENST00000466100 RTN4Q9NQC3 1192 aaKnown RBP12.05□□□□□ -0.48
VCP-204ENST00000466100 UBQLN1Q9UMX0 589 aaKnown RBP12.05□□□□□ -0.48
VCP-204ENST00000466100 INPP5FQ9Y2H2 1132 aa12.05□□□□□ -0.48
VCP-204ENST00000466100 SLC4A7Q9Y6M7 1214 aa12.05□□□□□ -0.48
VCP-204ENST00000466100 REV3LO60673 3130 aa12.04□□□□□ -0.48
VCP-204ENST00000466100 ANO9A1A5B4 782 aa12.04□□□□□ -0.48
VCP-204ENST00000466100 GTPBP10A4D1E9 387 aaKnown RBP12.04□□□□□ -0.48
VCP-204ENST00000466100 TBKBP1A7MCY6 615 aa12.04□□□□□ -0.48
VCP-204ENST00000466100 P4HA2O15460 535 aa12.04□□□□□ -0.48
VCP-204ENST00000466100 STX10O60499 249 aa12.04□□□□□ -0.48
VCP-204ENST00000466100 DDHD2O94830 711 aa12.04□□□□□ -0.48
VCP-204ENST00000466100 TMEM191BP0C7N4 346 aa12.04□□□□□ -0.48
VCP-204ENST00000466100 LINC00271P0C7V0 271 aa12.04□□□□□ -0.48
VCP-204ENST00000466100 LRPAP1P30533 357 aa12.04□□□□□ -0.48
VCP-204ENST00000466100 BMP8BP34820 402 aa12.04□□□□□ -0.48
VCP-204ENST00000466100 MYL7Q01449 175 aa12.04□□□□□ -0.48
VCP-204ENST00000466100 TUSC3Q13454 348 aa12.04□□□□□ -0.48
VCP-204ENST00000466100 EPC2Q52LR7 807 aa12.04□□□□□ -0.48
VCP-204ENST00000466100 KRT39Q6A163 491 aa12.04□□□□□ -0.48
VCP-204ENST00000466100 DPY19L2P1Q6NXN4 242 aa12.04□□□□□ -0.48
VCP-204ENST00000466100 ZNF280BQ86YH2 543 aa12.04□□□□□ -0.48
VCP-204ENST00000466100 CREBRFQ8IUR6 639 aa12.04□□□□□ -0.48
VCP-204ENST00000466100 HERC6Q8IVU3 1022 aa12.04□□□□□ -0.48
VCP-204ENST00000466100 ANKRD20A12PQ8NF67 263 aa12.04□□□□□ -0.48
VCP-204ENST00000466100 URGCPQ8TCY9 931 aa12.04□□□□□ -0.48
VCP-204ENST00000466100 SP7Q8TDD2 431 aaPredicted RBP12.04□□□□□ -0.48
VCP-204ENST00000466100 TAS1R2Q8TE23 839 aa12.04□□□□□ -0.48
VCP-204ENST00000466100 CACTINQ8WUQ7 758 aaKnown RBP12.04□□□□□ -0.48
VCP-204ENST00000466100 SEMA4DQ92854 862 aa12.04□□□□□ -0.48
VCP-204ENST00000466100 ANKRD36BP1Q96IX9 119 aa12.04□□□□□ -0.48
VCP-204ENST00000466100 MRPL9Q9BYD2 267 aaKnown RBP12.04□□□□□ -0.48
VCP-204ENST00000466100 MTIF3Q9H2K0 278 aaKnown RBP12.04□□□□□ -0.48
VCP-204ENST00000466100 GOLGA2P5Q9HBQ8 144 aa12.04□□□□□ -0.48
VCP-204ENST00000466100 SLC38A7Q9NVC3 462 aa12.04□□□□□ -0.48
VCP-204ENST00000466100 DPP3Q9NY33 737 aa12.04□□□□□ -0.48
VCP-204ENST00000466100 HCSTQ9UBK5 93 aa12.04□□□□□ -0.48
VCP-204ENST00000466100 ITGA11Q9UKX5 1188 aa12.04□□□□□ -0.48
VCP-204ENST00000466100 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.04□□□□□ -0.48
VCP-204ENST00000466100 PLXNA4Q9HCM2 1894 aa12.04□□□□□ -0.48
VCP-204ENST00000466100 PPEF2O14830 753 aa12.03□□□□□ -0.48
VCP-204ENST00000466100 TEX33O43247 280 aa12.03□□□□□ -0.48
VCP-204ENST00000466100 XPOTO43592 962 aaKnown RBP12.03□□□□□ -0.48
VCP-204ENST00000466100 N4BP1O75113 896 aaKnown RBP12.03□□□□□ -0.48
VCP-204ENST00000466100 LRRN2O75325 713 aa12.03□□□□□ -0.48
VCP-204ENST00000466100 HLA-DRAP01903 254 aa12.03□□□□□ -0.48
VCP-204ENST00000466100 TNNC2P02585 160 aa12.03□□□□□ -0.48
VCP-204ENST00000466100 ATP2A2P16615 1042 aaKnown RBP12.03□□□□□ -0.48
VCP-204ENST00000466100 PBX1P40424 430 aa12.03□□□□□ -0.48
VCP-204ENST00000466100 NR1I3Q14994 352 aa12.03□□□□□ -0.48
VCP-204ENST00000466100 FAM109BQ6ICB4 259 aaPredicted RBP12.03□□□□□ -0.48
VCP-204ENST00000466100 FAM117BQ6P1L5 589 aa12.03□□□□□ -0.48
VCP-204ENST00000466100 COLGALT2Q8IYK4 626 aa12.03□□□□□ -0.48
VCP-204ENST00000466100 CMTR2Q8IYT2 770 aaKnown RBP12.03□□□□□ -0.48
VCP-204ENST00000466100 ABI1Q8IZP0 508 aa12.03□□□□□ -0.48
VCP-204ENST00000466100 LRRC43Q8N309 656 aa12.03□□□□□ -0.48
VCP-204ENST00000466100 BEST2Q8NFU1 509 aa12.03□□□□□ -0.48
VCP-204ENST00000466100 LMO3Q8TAP4 145 aa12.03□□□□□ -0.48
VCP-204ENST00000466100 RNPC3Q96LT9 517 aaKnown RBP12.03□□□□□ -0.48
VCP-204ENST00000466100 ERGIC2Q96RQ1 377 aa12.03□□□□□ -0.48
VCP-204ENST00000466100 PAAF1Q9BRP4 392 aa12.03□□□□□ -0.48
VCP-204ENST00000466100 UBE2OQ9C0C9 1292 aaKnown RBP12.03□□□□□ -0.48
VCP-204ENST00000466100 XPO4Q9C0E2 1151 aaKnown RBP12.03□□□□□ -0.48
VCP-204ENST00000466100 XYLT2Q9H1B5 865 aa12.03□□□□□ -0.48
VCP-204ENST00000466100 CWH43Q9H720 699 aa12.03□□□□□ -0.48
VCP-204ENST00000466100 NRDE2Q9H7Z3 1164 aa12.03□□□□□ -0.48
VCP-204ENST00000466100 MMRN2Q9H8L6 949 aa12.03□□□□□ -0.48
VCP-204ENST00000466100 IFNKQ9P0W0 207 aa12.03□□□□□ -0.48
VCP-204ENST00000466100 KANSL3Q9P2N6 904 aa12.03□□□□□ -0.48
VCP-204ENST00000466100 CACNG4Q9UBN1 327 aa12.03□□□□□ -0.48
VCP-204ENST00000466100 ATG2AQ2TAZ0 1938 aa12.02□□□□□ -0.49
VCP-204ENST00000466100 GOLGA6L3A6NEY3 463 aa12.02□□□□□ -0.49
VCP-204ENST00000466100 PIRO00625 290 aa12.02□□□□□ -0.49
VCP-204ENST00000466100 SERPINC1P01008 464 aa12.02□□□□□ -0.49
VCP-204ENST00000466100 CST3P01034 146 aaPredicted RBP12.02□□□□□ -0.49
VCP-204ENST00000466100 ITGB3P05106 788 aa12.02□□□□□ -0.49
VCP-204ENST00000466100 IGFBP6P24592 240 aaPredicted RBP12.02□□□□□ -0.49
VCP-204ENST00000466100 POLR2BP30876 1174 aaKnown RBP12.02□□□□□ -0.49
VCP-204ENST00000466100 UBASH3AP57075 661 aa12.02□□□□□ -0.49
VCP-204ENST00000466100 KCNMA1Q12791 1236 aa12.02□□□□□ -0.49
VCP-204ENST00000466100 BIRC3Q13489 604 aa12.02□□□□□ -0.49
VCP-204ENST00000466100 NCOA4Q13772 614 aa12.02□□□□□ -0.49
VCP-204ENST00000466100 UPP1Q16831 310 aa12.02□□□□□ -0.49
VCP-204ENST00000466100 PAN2Q504Q3 1202 aaKnown RBP12.02□□□□□ -0.49
VCP-204ENST00000466100 C9orf57Q5W0N0 161 aa12.02□□□□□ -0.49
VCP-204ENST00000466100 CD300LGQ6UXG3 332 aa12.02□□□□□ -0.49
VCP-204ENST00000466100 C3orf58Q8NDZ4 430 aa12.02□□□□□ -0.49
VCP-204ENST00000466100 FBXL13Q8NEE6 735 aa12.02□□□□□ -0.49
VCP-204ENST00000466100 VRTNQ9H8Y1 702 aa12.02□□□□□ -0.49
VCP-204ENST00000466100 GRPEL1Q9HAV7 217 aa12.02□□□□□ -0.49
VCP-204ENST00000466100 DNAJB4Q9UDY4 337 aa12.02□□□□□ -0.49
VCP-204ENST00000466100 SIK3Q9Y2K2 1263 aa12.02□□□□□ -0.49
VCP-204ENST00000466100 A0A1W2PQC6 194 aa12.01□□□□□ -0.49
VCP-204ENST00000466100 LCHNA4D1U4 455 aa12.01□□□□□ -0.49
VCP-204ENST00000466100 CASTOR2A6NHX0 329 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms