RNA–Protein interactions for RNA: ENST00000465780.1

RBBP4-209, Transcript of RB binding protein 4, chromatin remodeling factor, humanhuman

TSL 2

Gene RBBP4, Length 690 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBBP4-209ENST00000465780 USP41Q3LFD5 358 aa11.58□□□□□ -0.56
RBBP4-209ENST00000465780 ZBTB41Q5SVQ8 909 aa11.58□□□□□ -0.56
RBBP4-209ENST00000465780 PPP1R15BQ5SWA1 713 aa11.58□□□□□ -0.56
RBBP4-209ENST00000465780 ARMCX5Q6P1M9 558 aa11.58□□□□□ -0.56
RBBP4-209ENST00000465780 CRELD2Q6UXH1 353 aaPredicted RBP11.58□□□□□ -0.56
RBBP4-209ENST00000465780 HS2ST1Q7LGA3 356 aa11.58□□□□□ -0.56
RBBP4-209ENST00000465780 NT5DC4Q86YG4 428 aa11.58□□□□□ -0.56
RBBP4-209ENST00000465780 BRSK2Q8IWQ3 736 aa11.58□□□□□ -0.56
RBBP4-209ENST00000465780 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.58□□□□□ -0.56
RBBP4-209ENST00000465780 C12orf56Q8IXR9 622 aa11.58□□□□□ -0.56
RBBP4-209ENST00000465780 KIAA0895Q8NCT3 520 aa11.58□□□□□ -0.56
RBBP4-209ENST00000465780 GOLGA5Q8TBA6 731 aa11.58□□□□□ -0.56
RBBP4-209ENST00000465780 TMEM174Q8WUU8 243 aa11.58□□□□□ -0.56
RBBP4-209ENST00000465780 PAAF1Q9BRP4 392 aa11.58□□□□□ -0.56
RBBP4-209ENST00000465780 GTPBP4Q9BZE4 634 aaKnown RBP11.58□□□□□ -0.56
RBBP4-209ENST00000465780 IKZF4Q9H2S9 585 aa11.58□□□□□ -0.56
RBBP4-209ENST00000465780 UBE2ZQ9H832 354 aaPredicted RBP11.58□□□□□ -0.56
RBBP4-209ENST00000465780 KIAA1586Q9HCI6 787 aa11.58□□□□□ -0.56
RBBP4-209ENST00000465780 MRPL17Q9NRX2 175 aaKnown RBP11.58□□□□□ -0.56
RBBP4-209ENST00000465780 CHST7Q9NS84 486 aa11.58□□□□□ -0.56
RBBP4-209ENST00000465780 C2CD2Q9Y426 696 aa11.58□□□□□ -0.56
RBBP4-209ENST00000465780 PCDHGC5Q9Y5F6 944 aa11.58□□□□□ -0.56
RBBP4-209ENST00000465780 MTCL1Q9Y4B5 1905 aaKnown RBP11.58□□□□□ -0.56
RBBP4-209ENST00000465780 HIDE1A8MVS5 230 aa11.57□□□□□ -0.56
RBBP4-209ENST00000465780 PODXLO00592 558 aa11.57□□□□□ -0.56
RBBP4-209ENST00000465780 TGFB1I1O43294 461 aa11.57□□□□□ -0.56
RBBP4-209ENST00000465780 TRAPPC3O43617 180 aa11.57□□□□□ -0.56
RBBP4-209ENST00000465780 LILRB3O75022 631 aa11.57□□□□□ -0.56
RBBP4-209ENST00000465780 B3GAT3O94766 335 aa11.57□□□□□ -0.56
RBBP4-209ENST00000465780 CSPG5O95196 566 aa11.57□□□□□ -0.56
RBBP4-209ENST00000465780 KIF4AO95239 1232 aa11.57□□□□□ -0.56
RBBP4-209ENST00000465780 C1RP00736 705 aa11.57□□□□□ -0.56
RBBP4-209ENST00000465780 PAX3P23760 479 aa11.57□□□□□ -0.56
RBBP4-209ENST00000465780 MLLT3P42568 568 aaPredicted RBP11.57□□□□□ -0.56
RBBP4-209ENST00000465780 NRIP1P48552 1158 aa11.57□□□□□ -0.56
RBBP4-209ENST00000465780 GLUD2P49448 558 aa11.57□□□□□ -0.56
RBBP4-209ENST00000465780 ACOT2P49753 483 aa11.57□□□□□ -0.56
RBBP4-209ENST00000465780 CLCNKBP51801 687 aa11.57□□□□□ -0.56
RBBP4-209ENST00000465780 UBE2HP62256 183 aa11.57□□□□□ -0.56
RBBP4-209ENST00000465780 MRPS5P82675 430 aaKnown RBP11.57□□□□□ -0.56
RBBP4-209ENST00000465780 DSG1Q02413 1049 aa11.57□□□□□ -0.56
RBBP4-209ENST00000465780 CREMQ03060 361 aa11.57□□□□□ -0.56
RBBP4-209ENST00000465780 SOX4Q06945 474 aaPredicted RBP11.57□□□□□ -0.56
RBBP4-209ENST00000465780 ADAM15Q13444 863 aa11.57□□□□□ -0.56
RBBP4-209ENST00000465780 PTPN14Q15678 1187 aa11.57□□□□□ -0.56
RBBP4-209ENST00000465780 KIAA0319Q5VV43 1072 aa11.57□□□□□ -0.56
RBBP4-209ENST00000465780 PDXDC1Q6P996 788 aa11.57□□□□□ -0.56
RBBP4-209ENST00000465780 TMEM184AQ6ZMB5 413 aa11.57□□□□□ -0.56
RBBP4-209ENST00000465780 GPD1LQ8N335 351 aa11.57□□□□□ -0.56
RBBP4-209ENST00000465780 BEST2Q8NFU1 509 aa11.57□□□□□ -0.56
RBBP4-209ENST00000465780 GSDMAQ96QA5 445 aa11.57□□□□□ -0.56
RBBP4-209ENST00000465780 CBWD1Q9BRT8 395 aa11.57□□□□□ -0.56
RBBP4-209ENST00000465780 FAM213AQ9BRX8 229 aa11.57□□□□□ -0.56
RBBP4-209ENST00000465780 EMILIN2Q9BXX0 1053 aa11.57□□□□□ -0.56
RBBP4-209ENST00000465780 GPR62Q9BZJ7 368 aa11.57□□□□□ -0.56
RBBP4-209ENST00000465780 PRDM6Q9NQX0 595 aa11.57□□□□□ -0.56
RBBP4-209ENST00000465780 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.57□□□□□ -0.56
RBBP4-209ENST00000465780 AGPAT3Q9NRZ7 376 aa11.57□□□□□ -0.56
RBBP4-209ENST00000465780 CUL9Q8IWT3 2517 aa11.57□□□□□ -0.56
RBBP4-209ENST00000465780 SCN1AP35498 2009 aa11.57□□□□□ -0.56
RBBP4-209ENST00000465780 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.56□□□□□ -0.56
RBBP4-209ENST00000465780 F8W810 466 aa11.56□□□□□ -0.56
RBBP4-209ENST00000465780 KINO60870 393 aaKnown RBP11.56□□□□□ -0.56
RBBP4-209ENST00000465780 SMC2O95347 1197 aa11.56□□□□□ -0.56
RBBP4-209ENST00000465780 SRGAP2BP0DMP2 458 aa11.56□□□□□ -0.56
RBBP4-209ENST00000465780 KCNC3Q14003 757 aa11.56□□□□□ -0.56
RBBP4-209ENST00000465780 TMEM132DQ14C87 1099 aa11.56□□□□□ -0.56
RBBP4-209ENST00000465780 SURF1Q15526 300 aa11.56□□□□□ -0.56
RBBP4-209ENST00000465780 PUS10Q3MIT2 529 aaKnown RBP11.56□□□□□ -0.56
RBBP4-209ENST00000465780 LEXMQ3ZCV2 418 aa11.56□□□□□ -0.56
RBBP4-209ENST00000465780 SPATA1Q5VX52 437 aa11.56□□□□□ -0.56
RBBP4-209ENST00000465780 JADE1Q6IE81 842 aa11.56□□□□□ -0.56
RBBP4-209ENST00000465780 KIAA1841Q6NSI8 718 aa11.56□□□□□ -0.56
RBBP4-209ENST00000465780 CD300LGQ6UXG3 332 aa11.56□□□□□ -0.56
RBBP4-209ENST00000465780 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.56□□□□□ -0.56
RBBP4-209ENST00000465780 TAS1R1Q7RTX1 841 aa11.56□□□□□ -0.56
RBBP4-209ENST00000465780 PPFIBP1Q86W92 1011 aa11.56□□□□□ -0.56
RBBP4-209ENST00000465780 NELFCDQ8IXH7 590 aa11.56□□□□□ -0.56
RBBP4-209ENST00000465780 SPATA20Q8TB22 786 aa11.56□□□□□ -0.56
RBBP4-209ENST00000465780 C18orf25Q96B23 403 aaPredicted RBP11.56□□□□□ -0.56
RBBP4-209ENST00000465780 FBXL18Q96ME1 805 aa11.56□□□□□ -0.56
RBBP4-209ENST00000465780 IGFLR1Q9H665 355 aa11.56□□□□□ -0.56
RBBP4-209ENST00000465780 GOLGA2P5Q9HBQ8 144 aa11.56□□□□□ -0.56
RBBP4-209ENST00000465780 RXFP1Q9HBX9 757 aa11.56□□□□□ -0.56
RBBP4-209ENST00000465780 RMND1Q9NWS8 449 aa11.56□□□□□ -0.56
RBBP4-209ENST00000465780 CLDND1Q9NY35 253 aa11.56□□□□□ -0.56
RBBP4-209ENST00000465780 RBAKQ9NYW8 714 aaPredicted RBP11.56□□□□□ -0.56
RBBP4-209ENST00000465780 HSPBP1Q9NZL4 362 aa11.56□□□□□ -0.56
RBBP4-209ENST00000465780 FNIP2Q9P278 1114 aa11.56□□□□□ -0.56
RBBP4-209ENST00000465780 CACNG4Q9UBN1 327 aa11.56□□□□□ -0.56
RBBP4-209ENST00000465780 ZNF233A6NK53 670 aa11.55□□□□□ -0.56
RBBP4-209ENST00000465780 PDXKO00764 312 aa11.55□□□□□ -0.56
RBBP4-209ENST00000465780 PER2O15055 1255 aa11.55□□□□□ -0.56
RBBP4-209ENST00000465780 CLASP2O75122 1294 aaKnown RBP11.55□□□□□ -0.56
RBBP4-209ENST00000465780 GADD45BO75293 160 aaPredicted RBP11.55□□□□□ -0.56
RBBP4-209ENST00000465780 FGFR3P22607 806 aa11.55□□□□□ -0.56
RBBP4-209ENST00000465780 GTF2F1P35269 517 aaKnown RBP eCLIP11.55□□□□□ -0.56
RBBP4-209ENST00000465780 LTBRP36941 435 aa11.55□□□□□ -0.56
RBBP4-209ENST00000465780 MYBPC2Q14324 1141 aa11.55□□□□□ -0.56
RBBP4-209ENST00000465780 COBLL1Q53SF7 1204 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms