RNA–Protein interactions for RNA: ENST00000465756.5

NPHP3-203, Transcript of nephrocystin 3, humanhuman

TSL 5

Gene NPHP3, Length 3,852 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-203ENST00000465756 YWHAEP62258 255 aaKnown RBP11.66□□□□□ -0.54
NPHP3-203ENST00000465756 PDE4CQ08493 712 aa11.66□□□□□ -0.54
NPHP3-203ENST00000465756 ADAM15Q13444 863 aa11.66□□□□□ -0.54
NPHP3-203ENST00000465756 OTOP3Q7RTS5 596 aa11.66□□□□□ -0.54
NPHP3-203ENST00000465756 FAM213AQ9BRX8 229 aa11.66□□□□□ -0.54
NPHP3-203ENST00000465756 POLD4Q9HCU8 107 aa11.66□□□□□ -0.54
NPHP3-203ENST00000465756 PTPRHQ9HD43 1115 aa11.66□□□□□ -0.54
NPHP3-203ENST00000465756 FAM237AA0A1B0GTK4 181 aa11.65□□□□□ -0.54
NPHP3-203ENST00000465756 CXCL8P10145 99 aa11.65□□□□□ -0.54
NPHP3-203ENST00000465756 CPB1P15086 417 aa11.65□□□□□ -0.54
NPHP3-203ENST00000465756 NFKBIBQ15653 356 aa11.65□□□□□ -0.54
NPHP3-203ENST00000465756 MAPRE1Q15691 268 aaKnown RBP11.65□□□□□ -0.54
NPHP3-203ENST00000465756 E2F4Q16254 413 aa11.65□□□□□ -0.54
NPHP3-203ENST00000465756 UVSSAQ2YD98 709 aa11.65□□□□□ -0.54
NPHP3-203ENST00000465756 CTXN3Q4LDR2 81 aa11.65□□□□□ -0.54
NPHP3-203ENST00000465756 RBM23Q86U06 439 aaKnown RBP11.65□□□□□ -0.54
NPHP3-203ENST00000465756 ZNF507Q8TCN5 953 aa11.65□□□□□ -0.54
NPHP3-203ENST00000465756 KRT19P08727 400 aa11.65□□□□□ -0.54
NPHP3-203ENST00000465756 CDK11BP21127 795 aaKnown RBP11.65□□□□□ -0.54
NPHP3-203ENST00000465756 PCSK1P29120 753 aa11.65□□□□□ -0.54
NPHP3-203ENST00000465756 TNNC1P63316 161 aa11.65□□□□□ -0.54
NPHP3-203ENST00000465756 BIRC3Q13489 604 aa11.65□□□□□ -0.54
NPHP3-203ENST00000465756 C12orf56Q8IXR9 622 aa11.65□□□□□ -0.54
NPHP3-203ENST00000465756 ZDHHC7Q9NXF8 308 aa11.65□□□□□ -0.54
NPHP3-203ENST00000465756 STYXL1Q9Y6J8 313 aa11.65□□□□□ -0.54
NPHP3-203ENST00000465756 C2CD2LO14523 706 aa11.65□□□□□ -0.54
NPHP3-203ENST00000465756 PRRG1O14668 218 aa11.65□□□□□ -0.54
NPHP3-203ENST00000465756 MBD3O95983 291 aa11.65□□□□□ -0.54
NPHP3-203ENST00000465756 ALADP13716 330 aa11.65□□□□□ -0.54
NPHP3-203ENST00000465756 LRPAP1P30533 357 aa11.65□□□□□ -0.54
NPHP3-203ENST00000465756 BFSP1Q12934 665 aa11.65□□□□□ -0.54
NPHP3-203ENST00000465756 GLRA4Q5JXX5 417 aa11.65□□□□□ -0.54
NPHP3-203ENST00000465756 ANKRD54Q6NXT1 300 aa11.65□□□□□ -0.54
NPHP3-203ENST00000465756 TMEM86AQ8N2M4 240 aa11.65□□□□□ -0.54
NPHP3-203ENST00000465756 GUF1Q8N442 669 aaKnown RBP11.65□□□□□ -0.54
NPHP3-203ENST00000465756 ANKRD20A12PQ8NF67 263 aa11.65□□□□□ -0.54
NPHP3-203ENST00000465756 KLHL5Q96PQ7 755 aa11.65□□□□□ -0.54
NPHP3-203ENST00000465756 RNF39Q9H2S5 420 aa11.65□□□□□ -0.54
NPHP3-203ENST00000465756 RXFP1Q9HBX9 757 aa11.65□□□□□ -0.54
NPHP3-203ENST00000465756 DPP3Q9NY33 737 aa11.65□□□□□ -0.54
NPHP3-203ENST00000465756 ZMYM5Q9UJ78 669 aa11.65□□□□□ -0.54
NPHP3-203ENST00000465756 C2orf71A6NGG8 1288 aa11.64□□□□□ -0.55
NPHP3-203ENST00000465756 N4BP1O75113 896 aaKnown RBP11.64□□□□□ -0.55
NPHP3-203ENST00000465756 NFE2Q16621 373 aaPredicted RBP11.64□□□□□ -0.55
NPHP3-203ENST00000465756 ITIH5Q86UX2 942 aa11.64□□□□□ -0.55
NPHP3-203ENST00000465756 ZNF280BQ86YH2 543 aa11.64□□□□□ -0.55
NPHP3-203ENST00000465756 NELFCDQ8IXH7 590 aa11.64□□□□□ -0.55
NPHP3-203ENST00000465756 LRRC52Q8N7C0 313 aa11.64□□□□□ -0.55
NPHP3-203ENST00000465756 TRIML1Q8N9V2 468 aa11.64□□□□□ -0.55
NPHP3-203ENST00000465756 CMASQ8NFW8 434 aaPredicted RBP11.64□□□□□ -0.55
NPHP3-203ENST00000465756 PPP1R10Q96QC0 940 aaKnown RBP11.64□□□□□ -0.55
NPHP3-203ENST00000465756 BLZF1Q9H2G9 400 aa11.64□□□□□ -0.55
NPHP3-203ENST00000465756 METTL14Q9HCE5 456 aaKnown RBP11.64□□□□□ -0.55
NPHP3-203ENST00000465756 CPSF3Q9UKF6 684 aaKnown RBP11.64□□□□□ -0.55
NPHP3-203ENST00000465756 ZFP37Q9Y6Q3 630 aaPredicted RBP11.64□□□□□ -0.55
NPHP3-203ENST00000465756 ZNF197O14709 1029 aa11.64□□□□□ -0.55
NPHP3-203ENST00000465756 DDHD2O94830 711 aa11.64□□□□□ -0.55
NPHP3-203ENST00000465756 CYP2J2P51589 502 aa11.64□□□□□ -0.55
NPHP3-203ENST00000465756 YWHAHQ04917 246 aaPredicted RBP11.64□□□□□ -0.55
NPHP3-203ENST00000465756 ENPEPQ07075 957 aa11.64□□□□□ -0.55
NPHP3-203ENST00000465756 PTPN14Q15678 1187 aa11.64□□□□□ -0.55
NPHP3-203ENST00000465756 BMT2Q1RMZ1 405 aa11.64□□□□□ -0.55
NPHP3-203ENST00000465756 WDR49Q8IV35 697 aa11.64□□□□□ -0.55
NPHP3-203ENST00000465756 C2orf15Q8WU43 125 aaKnown RBP11.64□□□□□ -0.55
NPHP3-203ENST00000465756 SUSD3Q96L08 255 aa11.64□□□□□ -0.55
NPHP3-203ENST00000465756 UHRF1Q96T88 793 aaPredicted RBP11.64□□□□□ -0.55
NPHP3-203ENST00000465756 HSPBP1Q9NZL4 362 aa11.64□□□□□ -0.55
NPHP3-203ENST00000465756 LACTBL1A8MY62 500 aa11.64□□□□□ -0.55
NPHP3-203ENST00000465756 CLASP2O75122 1294 aaKnown RBP11.64□□□□□ -0.55
NPHP3-203ENST00000465756 FAM163BP0C2L3 166 aa11.64□□□□□ -0.55
NPHP3-203ENST00000465756 HYAL1Q12794 435 aa11.64□□□□□ -0.55
NPHP3-203ENST00000465756 XKR4Q5GH76 650 aa11.64□□□□□ -0.55
NPHP3-203ENST00000465756 SPATA1Q5VX52 437 aa11.64□□□□□ -0.55
NPHP3-203ENST00000465756 INTS8Q75QN2 995 aaKnown RBP11.64□□□□□ -0.55
NPHP3-203ENST00000465756 SLC39A2Q9NP94 309 aa11.64□□□□□ -0.55
NPHP3-203ENST00000465756 DNAJB4Q9UDY4 337 aa11.64□□□□□ -0.55
NPHP3-203ENST00000465756 TTC26A0AVF1 554 aa11.63□□□□□ -0.55
NPHP3-203ENST00000465756 GNA14O95837 355 aa11.63□□□□□ -0.55
NPHP3-203ENST00000465756 KMT5BQ4FZB7 885 aa11.63□□□□□ -0.55
NPHP3-203ENST00000465756 ZC2HC1CQ53FD0 456 aaPredicted RBP11.63□□□□□ -0.55
NPHP3-203ENST00000465756 LLGL2Q6P1M3 1020 aa11.63□□□□□ -0.55
NPHP3-203ENST00000465756 TMEM184AQ6ZMB5 413 aa11.63□□□□□ -0.55
NPHP3-203ENST00000465756 LRRC55Q6ZSA7 311 aa11.63□□□□□ -0.55
NPHP3-203ENST00000465756 FAM114A1Q8IWE2 563 aa11.63□□□□□ -0.55
NPHP3-203ENST00000465756 TDRD5Q8NAT2 981 aaKnown RBP11.63□□□□□ -0.55
NPHP3-203ENST00000465756 SNX25Q9H3E2 840 aa11.63□□□□□ -0.55
NPHP3-203ENST00000465756 HPSEQ9Y251 543 aa11.63□□□□□ -0.55
NPHP3-203ENST00000465756 EPOPA6NHQ4 379 aa11.63□□□□□ -0.55
NPHP3-203ENST00000465756 MYBP10242 640 aa11.63□□□□□ -0.55
NPHP3-203ENST00000465756 ATICP31939 592 aa11.63□□□□□ -0.55
NPHP3-203ENST00000465756 SMG7Q92540 1137 aaKnown RBP11.63□□□□□ -0.55
NPHP3-203ENST00000465756 EXOC4Q96A65 974 aa11.63□□□□□ -0.55
NPHP3-203ENST00000465756 MAPK13O15264 365 aa11.63□□□□□ -0.55
NPHP3-203ENST00000465756 ACTN4O43707 911 aaKnown RBP11.63□□□□□ -0.55
NPHP3-203ENST00000465756 RHOBTB3O94955 611 aa11.63□□□□□ -0.55
NPHP3-203ENST00000465756 PSMC2P35998 433 aaKnown RBP11.63□□□□□ -0.55
NPHP3-203ENST00000465756 LHX1P48742 406 aa11.63□□□□□ -0.55
NPHP3-203ENST00000465756 ACOT2P49753 483 aa11.63□□□□□ -0.55
NPHP3-203ENST00000465756 NDUFA8P51970 172 aa11.63□□□□□ -0.55
NPHP3-203ENST00000465756 CYP4A22Q5TCH4 519 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms