RNA–Protein interactions for RNA: ENST00000465601.1

CHPF2-202, Transcript of chondroitin polymerizing factor 2, humanhuman

TSL 3

Gene CHPF2, Length 782 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-202ENST00000465601 SOD2P04179 222 aa13.43□□□□□ -0.26
CHPF2-202ENST00000465601 RPL9P32969 192 aaKnown RBP13.43□□□□□ -0.26
CHPF2-202ENST00000465601 NRIP1P48552 1158 aa13.43□□□□□ -0.26
CHPF2-202ENST00000465601 HYAL1Q12794 435 aa13.43□□□□□ -0.26
CHPF2-202ENST00000465601 ZNF658Q5TYW1 1059 aaPredicted RBP13.43□□□□□ -0.26
CHPF2-202ENST00000465601 C12orf56Q8IXR9 622 aa13.43□□□□□ -0.26
CHPF2-202ENST00000465601 EFCAB13Q8IY85 973 aa13.43□□□□□ -0.26
CHPF2-202ENST00000465601 RNF168Q8IYW5 571 aaPredicted RBP13.43□□□□□ -0.26
CHPF2-202ENST00000465601 XXYLT1Q8NBI6 393 aa13.43□□□□□ -0.26
CHPF2-202ENST00000465601 C3orf58Q8NDZ4 430 aa13.43□□□□□ -0.26
CHPF2-202ENST00000465601 BEST2Q8NFU1 509 aa13.43□□□□□ -0.26
CHPF2-202ENST00000465601 GOLGA5Q8TBA6 731 aa13.43□□□□□ -0.26
CHPF2-202ENST00000465601 PPP2R3CQ969Q6 453 aa13.43□□□□□ -0.26
CHPF2-202ENST00000465601 B3GALT6Q96L58 329 aa13.43□□□□□ -0.26
CHPF2-202ENST00000465601 FBXL18Q96ME1 805 aa13.43□□□□□ -0.26
CHPF2-202ENST00000465601 TSPAN18Q96SJ8 248 aa13.43□□□□□ -0.26
CHPF2-202ENST00000465601 HERC2P3Q9BVR0 1158 aa13.43□□□□□ -0.26
CHPF2-202ENST00000465601 PDE11AQ9HCR9 933 aa13.43□□□□□ -0.26
CHPF2-202ENST00000465601 DERAQ9Y315 318 aa13.43□□□□□ -0.26
CHPF2-202ENST00000465601 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.42□□□□□ -0.26
CHPF2-202ENST00000465601 GOLGA6L22H0YM25 854 aa13.42□□□□□ -0.26
CHPF2-202ENST00000465601 TMEM189-UBE2V1I3L0A0 370 aa13.42□□□□□ -0.26
CHPF2-202ENST00000465601 I3L4J1 428 aa13.42□□□□□ -0.26
CHPF2-202ENST00000465601 BIN1O00499 593 aa13.42□□□□□ -0.26
CHPF2-202ENST00000465601 EXOC3O60645 756 aa13.42□□□□□ -0.26
CHPF2-202ENST00000465601 CYP3A5P20815 502 aa13.42□□□□□ -0.26
CHPF2-202ENST00000465601 LRPAP1P30533 357 aa13.42□□□□□ -0.26
CHPF2-202ENST00000465601 PRCPP42785 496 aa13.42□□□□□ -0.26
CHPF2-202ENST00000465601 BRCC3P46736 316 aa13.42□□□□□ -0.26
CHPF2-202ENST00000465601 PTPN14Q15678 1187 aa13.42□□□□□ -0.26
CHPF2-202ENST00000465601 SNRNP35Q16560 246 aaKnown RBP13.42□□□□□ -0.26
CHPF2-202ENST00000465601 USP41Q3LFD5 358 aa13.42□□□□□ -0.26
CHPF2-202ENST00000465601 FAM171A1Q5VUB5 890 aa13.42□□□□□ -0.26
CHPF2-202ENST00000465601 KIAA0319Q5VV43 1072 aa13.42□□□□□ -0.26
CHPF2-202ENST00000465601 SPATA1Q5VX52 437 aa13.42□□□□□ -0.26
CHPF2-202ENST00000465601 KIAA1841Q6NSI8 718 aa13.42□□□□□ -0.26
CHPF2-202ENST00000465601 EP400NLQ6ZTU2 488 aa13.42□□□□□ -0.26
CHPF2-202ENST00000465601 CEP57Q86XR8 500 aa13.42□□□□□ -0.26
CHPF2-202ENST00000465601 FAM84AQ96KN4 292 aa13.42□□□□□ -0.26
CHPF2-202ENST00000465601 KIAA1586Q9HCI6 787 aa13.42□□□□□ -0.26
CHPF2-202ENST00000465601 MRPL17Q9NRX2 175 aaKnown RBP13.42□□□□□ -0.26
CHPF2-202ENST00000465601 DMAC2Q9NW81 257 aa13.42□□□□□ -0.26
CHPF2-202ENST00000465601 STK39Q9UEW8 545 aa13.42□□□□□ -0.26
CHPF2-202ENST00000465601 C2CD2Q9Y426 696 aa13.42□□□□□ -0.26
CHPF2-202ENST00000465601 SF3B1O75533 1304 aaKnown RBP eCLIP13.41□□□□□ -0.26
CHPF2-202ENST00000465601 PPEF2O14830 753 aa13.41□□□□□ -0.26
CHPF2-202ENST00000465601 CALUO43852 315 aaPredicted RBP13.41□□□□□ -0.26
CHPF2-202ENST00000465601 LILRB3O75022 631 aa13.41□□□□□ -0.26
CHPF2-202ENST00000465601 NR3C1P04150 777 aa13.41□□□□□ -0.26
CHPF2-202ENST00000465601 URODP06132 367 aa13.41□□□□□ -0.26
CHPF2-202ENST00000465601 GLUD2P49448 558 aa13.41□□□□□ -0.26
CHPF2-202ENST00000465601 TFAMQ00059 246 aaKnown RBP13.41□□□□□ -0.26
CHPF2-202ENST00000465601 DSG1Q02413 1049 aa13.41□□□□□ -0.26
CHPF2-202ENST00000465601 ELAVL2Q12926 359 aaKnown RBP13.41□□□□□ -0.26
CHPF2-202ENST00000465601 DUSP6Q16828 381 aa13.41□□□□□ -0.26
CHPF2-202ENST00000465601 LMBRD2Q68DH5 695 aaPredicted RBP13.41□□□□□ -0.26
CHPF2-202ENST00000465601 SLC9A9Q8IVB4 645 aa13.41□□□□□ -0.26
CHPF2-202ENST00000465601 RIN2Q8WYP3 895 aaPredicted RBP13.41□□□□□ -0.26
CHPF2-202ENST00000465601 CLSTN2Q9H4D0 955 aa13.41□□□□□ -0.26
CHPF2-202ENST00000465601 CHST7Q9NS84 486 aa13.41□□□□□ -0.26
CHPF2-202ENST00000465601 DPP3Q9NY33 737 aa13.41□□□□□ -0.26
CHPF2-202ENST00000465601 TRAF3IP3Q9Y228 551 aa13.41□□□□□ -0.26
CHPF2-202ENST00000465601 NUB1Q9Y5A7 615 aa13.41□□□□□ -0.26
CHPF2-202ENST00000465601 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.41□□□□□ -0.26
CHPF2-202ENST00000465601 IRAK3Q9Y616 596 aa13.41□□□□□ -0.26
CHPF2-202ENST00000465601 UNC80Q8N2C7 3258 aa13.41□□□□□ -0.26
CHPF2-202ENST00000465601 TCF20Q9UGU0 1960 aaKnown RBP13.4□□□□□ -0.26
CHPF2-202ENST00000465601 LINC01565O15544 149 aa13.4□□□□□ -0.26
CHPF2-202ENST00000465601 TRAPPC3O43617 180 aa13.4□□□□□ -0.26
CHPF2-202ENST00000465601 NCK2O43639 380 aa13.4□□□□□ -0.26
CHPF2-202ENST00000465601 CLASP2O75122 1294 aaKnown RBP13.4□□□□□ -0.26
CHPF2-202ENST00000465601 CNPP09543 421 aaKnown RBP13.4□□□□□ -0.26
CHPF2-202ENST00000465601 BMP6P22004 513 aa13.4□□□□□ -0.26
CHPF2-202ENST00000465601 CASP4P49662 377 aa13.4□□□□□ -0.26
CHPF2-202ENST00000465601 RBM10P98175 930 aaKnown RBP13.4□□□□□ -0.26
CHPF2-202ENST00000465601 CYP24A1Q07973 514 aa13.4□□□□□ -0.26
CHPF2-202ENST00000465601 ADAM15Q13444 863 aa13.4□□□□□ -0.26
CHPF2-202ENST00000465601 MORC3Q14149 939 aa13.4□□□□□ -0.26
CHPF2-202ENST00000465601 SURF1Q15526 300 aa13.4□□□□□ -0.26
CHPF2-202ENST00000465601 RTP2Q5QGT7 225 aa13.4□□□□□ -0.26
CHPF2-202ENST00000465601 C9orf57Q5W0N0 161 aa13.4□□□□□ -0.26
CHPF2-202ENST00000465601 CEP135Q66GS9 1140 aa13.4□□□□□ -0.26
CHPF2-202ENST00000465601 PRSS55Q6UWB4 352 aaPredicted RBP13.4□□□□□ -0.26
CHPF2-202ENST00000465601 NT5DC4Q86YG4 428 aa13.4□□□□□ -0.26
CHPF2-202ENST00000465601 ADSSL1Q8N142 457 aa13.4□□□□□ -0.26
CHPF2-202ENST00000465601 GPT2Q8TD30 523 aa13.4□□□□□ -0.26
CHPF2-202ENST00000465601 CACTINQ8WUQ7 758 aaKnown RBP13.4□□□□□ -0.26
CHPF2-202ENST00000465601 HLA-CQ95604 372 aa13.4□□□□□ -0.26
CHPF2-202ENST00000465601 CCDC127Q96BQ5 260 aa13.4□□□□□ -0.26
CHPF2-202ENST00000465601 MFSD14AQ96MC6 490 aa13.4□□□□□ -0.26
CHPF2-202ENST00000465601 KLHL5Q96PQ7 755 aa13.4□□□□□ -0.26
CHPF2-202ENST00000465601 POP1Q99575 1024 aaKnown RBP13.4□□□□□ -0.26
CHPF2-202ENST00000465601 TTPALQ9BTX7 342 aa13.4□□□□□ -0.26
CHPF2-202ENST00000465601 GTPBP4Q9BZE4 634 aaKnown RBP13.4□□□□□ -0.26
CHPF2-202ENST00000465601 CLDND1Q9NY35 253 aa13.4□□□□□ -0.26
CHPF2-202ENST00000465601 KIAA1468Q9P260 1216 aa13.4□□□□□ -0.26
CHPF2-202ENST00000465601 SSX2IPQ9Y2D8 614 aa13.4□□□□□ -0.26
CHPF2-202ENST00000465601 MTCL1Q9Y4B5 1905 aaKnown RBP13.4□□□□□ -0.26
CHPF2-202ENST00000465601 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.39□□□□□ -0.27
CHPF2-202ENST00000465601 ANO9A1A5B4 782 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms