RNA–Protein interactions for RNA: ENST00000464750.5

U2AF1-206, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 966 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-206ENST00000464750 NUB1Q9Y5A7 615 aa28.22■■■□□ 2.11
U2AF1-206ENST00000464750 BACE2Q9Y5Z0 518 aa28.22■■■□□ 2.11
U2AF1-206ENST00000464750 CDY1Q9Y6F8 540 aa28.22■■■□□ 2.11
U2AF1-206ENST00000464750 PPM1LQ5SGD2 360 aa28.21■■■□□ 2.11
U2AF1-206ENST00000464750 RSPO2Q6UXX9 243 aaPredicted RBP28.21■■■□□ 2.11
U2AF1-206ENST00000464750 KRI1Q8N9T8 703 aaKnown RBP28.21■■■□□ 2.11
U2AF1-206ENST00000464750 HNRNPA1P09651 372 aaKnown RBP eCLIP28.2■■■□□ 2.1
U2AF1-206ENST00000464750 NMT1P30419 496 aaKnown RBP28.2■■■□□ 2.1
U2AF1-206ENST00000464750 TNFSF9P41273 254 aa28.2■■■□□ 2.1
U2AF1-206ENST00000464750 GET4Q7L5D6 327 aaPredicted RBP28.2■■■□□ 2.1
U2AF1-206ENST00000464750 MAP4K3Q8IVH8 894 aa28.2■■■□□ 2.1
U2AF1-206ENST00000464750 MYADMQ96S97 322 aa28.2■■■□□ 2.1
U2AF1-206ENST00000464750 PLEKHA5Q9HAU0 1116 aa28.2■■■□□ 2.1
U2AF1-206ENST00000464750 MORC2Q9Y6X9 1032 aaPredicted RBP28.2■■■□□ 2.1
U2AF1-206ENST00000464750 PDGFBP01127 241 aaPredicted RBP28.19■■■□□ 2.1
U2AF1-206ENST00000464750 ABCD1P33897 745 aa28.19■■■□□ 2.1
U2AF1-206ENST00000464750 GTF2BQ00403 316 aa28.19■■■□□ 2.1
U2AF1-206ENST00000464750 PPP2R3AQ06190 1150 aa28.19■■■□□ 2.1
U2AF1-206ENST00000464750 SPAG1Q07617 926 aa28.19■■■□□ 2.1
U2AF1-206ENST00000464750 VARS2Q5ST30 1063 aaKnown RBP28.19■■■□□ 2.1
U2AF1-206ENST00000464750 ZBTB41Q5SVQ8 909 aa28.19■■■□□ 2.1
U2AF1-206ENST00000464750 RRAGBQ5VZM2 374 aa28.19■■■□□ 2.1
U2AF1-206ENST00000464750 SLC7A14Q8TBB6 771 aa28.19■■■□□ 2.1
U2AF1-206ENST00000464750 SNX21Q969T3 373 aa28.19■■■□□ 2.1
U2AF1-206ENST00000464750 KCNK12Q9HB15 430 aa28.19■■■□□ 2.1
U2AF1-206ENST00000464750 WDFY4Q6ZS81 3184 aa28.18■■■□□ 2.1
U2AF1-206ENST00000464750 TTC26A0AVF1 554 aa28.18■■■□□ 2.1
U2AF1-206ENST00000464750 SYN3O14994 580 aa28.18■■■□□ 2.1
U2AF1-206ENST00000464750 OGTO15294 1046 aa28.18■■■□□ 2.1
U2AF1-206ENST00000464750 FAM189A1O60320 539 aa28.18■■■□□ 2.1
U2AF1-206ENST00000464750 HOXA9P31269 272 aa28.18■■■□□ 2.1
U2AF1-206ENST00000464750 MCM4P33991 863 aa28.18■■■□□ 2.1
U2AF1-206ENST00000464750 VCPP55072 806 aaKnown RBP28.18■■■□□ 2.1
U2AF1-206ENST00000464750 TDGQ13569 410 aa28.18■■■□□ 2.1
U2AF1-206ENST00000464750 SLC39A14Q15043 492 aa28.18■■■□□ 2.1
U2AF1-206ENST00000464750 KYAT1Q16773 422 aa28.18■■■□□ 2.1
U2AF1-206ENST00000464750 AXDND1Q5T1B0 1012 aaPredicted RBP28.18■■■□□ 2.1
U2AF1-206ENST00000464750 SLC39A4Q6P5W5 647 aa28.18■■■□□ 2.1
U2AF1-206ENST00000464750 DYMQ7RTS9 669 aa28.18■■■□□ 2.1
U2AF1-206ENST00000464750 KIF12Q96FN5 646 aa28.18■■■□□ 2.1
U2AF1-206ENST00000464750 IGSF9Q9P2J2 1179 aa28.18■■■□□ 2.1
U2AF1-206ENST00000464750 EPS15L1Q9UBC2 864 aa28.18■■■□□ 2.1
U2AF1-206ENST00000464750 ANK1P16157 1881 aa28.18■■■□□ 2.1
U2AF1-206ENST00000464750 CCL16O15467 120 aa28.17■■■□□ 2.1
U2AF1-206ENST00000464750 GRASPQ7Z6J2 395 aaPredicted RBP28.17■■■□□ 2.1
U2AF1-206ENST00000464750 SFR1Q86XK3 245 aa28.17■■■□□ 2.1
U2AF1-206ENST00000464750 TMEM130Q8N3G9 435 aa28.17■■■□□ 2.1
U2AF1-206ENST00000464750 MSTO1Q9BUK6 570 aa28.17■■■□□ 2.1
U2AF1-206ENST00000464750 RPF1Q9H9Y2 349 aaKnown RBP28.17■■■□□ 2.1
U2AF1-206ENST00000464750 POLIQ9UNA4 740 aa28.17■■■□□ 2.1
U2AF1-206ENST00000464750 A0A0B4J269 797 aa28.16■■■□□ 2.1
U2AF1-206ENST00000464750 XYLBO75191 536 aa28.16■■■□□ 2.1
U2AF1-206ENST00000464750 NASPP49321 788 aaPredicted RBP28.16■■■□□ 2.1
U2AF1-206ENST00000464750 ROR1Q01973 937 aa28.16■■■□□ 2.1
U2AF1-206ENST00000464750 ENOX2Q16206 610 aaKnown RBP28.16■■■□□ 2.1
U2AF1-206ENST00000464750 ZC2HC1CQ53FD0 456 aaPredicted RBP28.16■■■□□ 2.1
U2AF1-206ENST00000464750 SLC8B1Q6J4K2 584 aa28.16■■■□□ 2.1
U2AF1-206ENST00000464750 DDX12PQ92771 950 aa28.16■■■□□ 2.1
U2AF1-206ENST00000464750 SUSD3Q96L08 255 aa28.16■■■□□ 2.1
U2AF1-206ENST00000464750 ST6GALNAC4Q9H4F1 302 aa28.16■■■□□ 2.1
U2AF1-206ENST00000464750 UBQLN1Q9UMX0 589 aaKnown RBP28.16■■■□□ 2.1
U2AF1-206ENST00000464750 DUSP12Q9UNI6 340 aa28.16■■■□□ 2.1
U2AF1-206ENST00000464750 MYMKA6NI61 221 aa28.15■■■□□ 2.1
U2AF1-206ENST00000464750 LACTBL1A8MY62 500 aa28.15■■■□□ 2.1
U2AF1-206ENST00000464750 FSHRP23945 695 aa28.15■■■□□ 2.1
U2AF1-206ENST00000464750 NTHL1P78549 312 aa28.15■■■□□ 2.1
U2AF1-206ENST00000464750 STK38Q15208 465 aa28.15■■■□□ 2.1
U2AF1-206ENST00000464750 IER5LQ5T953 404 aa28.15■■■□□ 2.1
U2AF1-206ENST00000464750 CCDC73Q6ZRK6 1079 aa28.15■■■□□ 2.1
U2AF1-206ENST00000464750 SV2BQ7L1I2 683 aa28.15■■■□□ 2.1
U2AF1-206ENST00000464750 HSCBQ8IWL3 235 aa28.15■■■□□ 2.1
U2AF1-206ENST00000464750 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP28.15■■■□□ 2.1
U2AF1-206ENST00000464750 GTF3C5Q9Y5Q8 519 aaPredicted RBP28.15■■■□□ 2.1
U2AF1-206ENST00000464750 H7C4K7 107 aa28.14■■■□□ 2.1
U2AF1-206ENST00000464750 POU2F2P09086 479 aa28.14■■■□□ 2.1
U2AF1-206ENST00000464750 LRPAP1P30533 357 aa28.14■■■□□ 2.1
U2AF1-206ENST00000464750 STAT6P42226 847 aa28.14■■■□□ 2.1
U2AF1-206ENST00000464750 ZBTB6Q15916 424 aa28.14■■■□□ 2.1
U2AF1-206ENST00000464750 UVSSAQ2YD98 709 aa28.14■■■□□ 2.1
U2AF1-206ENST00000464750 PRSS33Q8NF86 280 aa28.14■■■□□ 2.1
U2AF1-206ENST00000464750 RSAD2Q8WXG1 361 aa28.14■■■□□ 2.1
U2AF1-206ENST00000464750 NOTCH4Q99466 2003 aa28.14■■■□□ 2.09
U2AF1-206ENST00000464750 A0A087X0B3 334 aa28.13■■■□□ 2.09
U2AF1-206ENST00000464750 WDR27A2RRH5 827 aa28.13■■■□□ 2.09
U2AF1-206ENST00000464750 TISP43B9A030 160 aa28.13■■■□□ 2.09
U2AF1-206ENST00000464750 ANKRD63C9JTQ0 380 aa28.13■■■□□ 2.09
U2AF1-206ENST00000464750 XPOTO43592 962 aaKnown RBP28.13■■■□□ 2.09
U2AF1-206ENST00000464750 LAMP2P13473 410 aa28.13■■■□□ 2.09
U2AF1-206ENST00000464750 CYP3A5P20815 502 aa28.13■■■□□ 2.09
U2AF1-206ENST00000464750 AVPR2P30518 371 aa28.13■■■□□ 2.09
U2AF1-206ENST00000464750 ARPP19P56211 112 aa28.13■■■□□ 2.09
U2AF1-206ENST00000464750 MRPL58Q14197 206 aaKnown RBP28.13■■■□□ 2.09
U2AF1-206ENST00000464750 HVCN1Q96D96 273 aa28.13■■■□□ 2.09
U2AF1-206ENST00000464750 DNAJC19Q96DA6 116 aa28.13■■■□□ 2.09
U2AF1-206ENST00000464750 FAM212AQ96EL1 285 aa28.13■■■□□ 2.09
U2AF1-206ENST00000464750 SEL1LQ9UBV2 794 aa28.13■■■□□ 2.09
U2AF1-206ENST00000464750 FBXL5Q9UKA1 691 aa28.13■■■□□ 2.09
U2AF1-206ENST00000464750 CPSF3Q9UKF6 684 aaKnown RBP28.13■■■□□ 2.09
U2AF1-206ENST00000464750 PCDHB8Q9UN66 801 aa28.13■■■□□ 2.09
U2AF1-206ENST00000464750 TBC1D4O60343 1298 aa28.12■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms