RNA–Protein interactions for RNA: ENST00000463330.5

BCCIP-204, Transcript of BRCA2 and CDKN1A interacting protein, human

TSL 3

Gene BCCIP, Length 500 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BCCIP-204	ENST00000463330	TBCB	Q99426	244 aa		4.23	□□□□□ -1.73
BCCIP-204	ENST00000463330	ELAC2	Q9BQ52	826 aa	Known RBP	4.23	□□□□□ -1.73
BCCIP-204	ENST00000463330	FAM204A	Q9H8W3	233 aa		4.23	□□□□□ -1.73
BCCIP-204	ENST00000463330	ARMT1	Q9H993	441 aa		4.23	□□□□□ -1.73
BCCIP-204	ENST00000463330	L1RE1	Q9UN81	338 aa		4.23	□□□□□ -1.73
BCCIP-204	ENST00000463330	SIK3	Q9Y2K2	1263 aa		4.23	□□□□□ -1.73
BCCIP-204	ENST00000463330	NR2E3	Q9Y5X4	410 aa		4.23	□□□□□ -1.73
BCCIP-204	ENST00000463330	XDH	P47989	1333 aa		4.22	□□□□□ -1.73
BCCIP-204	ENST00000463330	WNT10B	O00744	389 aa		4.22	□□□□□ -1.73
BCCIP-204	ENST00000463330	AKR1B10	O60218	316 aa		4.22	□□□□□ -1.73
BCCIP-204	ENST00000463330	FAM20B	O75063	409 aa		4.22	□□□□□ -1.73
BCCIP-204	ENST00000463330	EIF3J	O75822	258 aa	Known RBP	4.22	□□□□□ -1.73
BCCIP-204	ENST00000463330	IPO13	O94829	963 aa	Known RBP	4.22	□□□□□ -1.73
BCCIP-204	ENST00000463330	PEX11B	O96011	259 aa		4.22	□□□□□ -1.73
BCCIP-204	ENST00000463330	ALDH5A1	P51649	535 aa	Predicted RBP	4.22	□□□□□ -1.73
BCCIP-204	ENST00000463330	INHBC	P55103	352 aa		4.22	□□□□□ -1.73
BCCIP-204	ENST00000463330	NRG3	P56975	720 aa		4.22	□□□□□ -1.73
BCCIP-204	ENST00000463330	SLC25A3	Q00325	362 aa		4.22	□□□□□ -1.73
BCCIP-204	ENST00000463330	TOB2	Q14106	344 aa	Predicted RBP	4.22	□□□□□ -1.73
BCCIP-204	ENST00000463330	MORC3	Q14149	939 aa		4.22	□□□□□ -1.73
BCCIP-204	ENST00000463330	UBE3C	Q15386	1083 aa		4.22	□□□□□ -1.73
BCCIP-204	ENST00000463330	CNN3	Q15417	329 aa	Known RBP	4.22	□□□□□ -1.73
BCCIP-204	ENST00000463330	VPS72	Q15906	364 aa		4.22	□□□□□ -1.73
BCCIP-204	ENST00000463330	RNF220	Q5VTB9	566 aa		4.22	□□□□□ -1.73
BCCIP-204	ENST00000463330	NAIF1	Q69YI7	327 aa	Predicted RBP	4.22	□□□□□ -1.73
BCCIP-204	ENST00000463330	TSHZ1	Q6ZSZ6	1077 aa		4.22	□□□□□ -1.73
BCCIP-204	ENST00000463330	APBB1IP	Q7Z5R6	666 aa	Predicted RBP	4.22	□□□□□ -1.73
BCCIP-204	ENST00000463330	SRL	Q86TD4	932 aa		4.22	□□□□□ -1.73
BCCIP-204	ENST00000463330	GLB1L2	Q8IW92	636 aa		4.22	□□□□□ -1.73
BCCIP-204	ENST00000463330	RHOT1	Q8IXI2	618 aa		4.22	□□□□□ -1.73
BCCIP-204	ENST00000463330	VPS37A	Q8NEZ2	397 aa		4.22	□□□□□ -1.73
BCCIP-204	ENST00000463330	GPR156	Q8NFN8	814 aa		4.22	□□□□□ -1.73
BCCIP-204	ENST00000463330	KLHDC4	Q8TBB5	520 aa		4.22	□□□□□ -1.73
BCCIP-204	ENST00000463330	HOXB13	Q92826	284 aa	Predicted RBP	4.22	□□□□□ -1.73
BCCIP-204	ENST00000463330	HDAC10	Q969S8	669 aa		4.22	□□□□□ -1.73
BCCIP-204	ENST00000463330	MNT	Q99583	582 aa		4.22	□□□□□ -1.73
BCCIP-204	ENST00000463330	PCGF6	Q9BYE7	350 aa		4.22	□□□□□ -1.73
BCCIP-204	ENST00000463330	NRDE2	Q9H7Z3	1164 aa		4.22	□□□□□ -1.73
BCCIP-204	ENST00000463330	PTPRH	Q9HD43	1115 aa		4.22	□□□□□ -1.73
BCCIP-204	ENST00000463330	RBM12	Q9NTZ6	932 aa	Known RBP	4.22	□□□□□ -1.73
BCCIP-204	ENST00000463330	KLHL11	Q9NVR0	708 aa		4.22	□□□□□ -1.73
BCCIP-204	ENST00000463330	C11orf21	Q9P2W6	132 aa		4.22	□□□□□ -1.73
BCCIP-204	ENST00000463330	STAP2	Q9UGK3	403 aa		4.22	□□□□□ -1.73
BCCIP-204	ENST00000463330		A0A087X1B8	175 aa		4.21	□□□□□ -1.74
BCCIP-204	ENST00000463330	GRXCR1	A8MXD5	290 aa		4.21	□□□□□ -1.74
BCCIP-204	ENST00000463330	GOLGA6L6	A8MZA4	724 aa		4.21	□□□□□ -1.74
BCCIP-204	ENST00000463330	HOXA3	O43365	443 aa	Predicted RBP	4.21	□□□□□ -1.74
BCCIP-204	ENST00000463330	FTL	P02792	175 aa	Predicted RBP	4.21	□□□□□ -1.74
BCCIP-204	ENST00000463330	CASR	P41180	1078 aa		4.21	□□□□□ -1.74
BCCIP-204	ENST00000463330	HTR3A	P46098	478 aa		4.21	□□□□□ -1.74
BCCIP-204	ENST00000463330	AGFG1	P52594	562 aa	Known RBP	4.21	□□□□□ -1.74
BCCIP-204	ENST00000463330	WNT3A	P56704	352 aa		4.21	□□□□□ -1.74
BCCIP-204	ENST00000463330	DPT	Q07507	201 aa		4.21	□□□□□ -1.74
BCCIP-204	ENST00000463330	MGAT2	Q10469	447 aa		4.21	□□□□□ -1.74
BCCIP-204	ENST00000463330	LONRF1	Q17RB8	773 aa		4.21	□□□□□ -1.74
BCCIP-204	ENST00000463330	FAM214A	Q32MH5	1076 aa		4.21	□□□□□ -1.74
BCCIP-204	ENST00000463330	ANO6	Q4KMQ2	910 aa		4.21	□□□□□ -1.74
BCCIP-204	ENST00000463330	DCAF17	Q5H9S7	520 aa	Predicted RBP	4.21	□□□□□ -1.74
BCCIP-204	ENST00000463330	XRRA1	Q6P2D8	792 aa		4.21	□□□□□ -1.74
BCCIP-204	ENST00000463330	SYNE4	Q8N205	404 aa		4.21	□□□□□ -1.74
BCCIP-204	ENST00000463330	SH2D3C	Q8N5H7	860 aa		4.21	□□□□□ -1.74
BCCIP-204	ENST00000463330	AMER2	Q8N7J2	671 aa		4.21	□□□□□ -1.74
BCCIP-204	ENST00000463330	OR5M3	Q8NGP4	307 aa		4.21	□□□□□ -1.74
BCCIP-204	ENST00000463330	DDX55	Q8NHQ9	600 aa	Known RBP eCLIP	4.21	□□□□□ -1.74
BCCIP-204	ENST00000463330	NSUN6	Q8TEA1	469 aa	Known RBP	4.21	□□□□□ -1.74
BCCIP-204	ENST00000463330	ST8SIA2	Q92186	375 aa		4.21	□□□□□ -1.74
BCCIP-204	ENST00000463330	CLPTM1L	Q96KA5	538 aa		4.21	□□□□□ -1.74
BCCIP-204	ENST00000463330	VRK1	Q99986	396 aa	Predicted RBP	4.21	□□□□□ -1.74
BCCIP-204	ENST00000463330	PDCD2L	Q9BRP1	358 aa		4.21	□□□□□ -1.74
BCCIP-204	ENST00000463330	LDAH	Q9H6V9	325 aa		4.21	□□□□□ -1.74
BCCIP-204	ENST00000463330	ATP6V0A4	Q9HBG4	840 aa		4.21	□□□□□ -1.74
BCCIP-204	ENST00000463330	PCDHA3	Q9Y5H8	950 aa		4.21	□□□□□ -1.74
BCCIP-204	ENST00000463330	RPTOR	Q8N122	1335 aa		4.21	□□□□□ -1.74
BCCIP-204	ENST00000463330	CFAP69	A5D8W1	941 aa		4.2	□□□□□ -1.74
BCCIP-204	ENST00000463330	CAPN8	A6NHC0	703 aa		4.2	□□□□□ -1.74
BCCIP-204	ENST00000463330	FAM227A	F5H4B4	570 aa		4.2	□□□□□ -1.74
BCCIP-204	ENST00000463330	IFRD1	O00458	451 aa	Predicted RBP	4.2	□□□□□ -1.74
BCCIP-204	ENST00000463330	PRAMEF4	O60810	478 aa		4.2	□□□□□ -1.74
BCCIP-204	ENST00000463330	RAMP2	O60895	175 aa		4.2	□□□□□ -1.74
BCCIP-204	ENST00000463330	DTNB	O60941	627 aa		4.2	□□□□□ -1.74
BCCIP-204	ENST00000463330	LTA4H	P09960	611 aa	Known RBP	4.2	□□□□□ -1.74
BCCIP-204	ENST00000463330	PEX2	P28328	305 aa		4.2	□□□□□ -1.74
BCCIP-204	ENST00000463330	PTGS2	P35354	604 aa		4.2	□□□□□ -1.74
BCCIP-204	ENST00000463330	PIK3CB	P42338	1070 aa		4.2	□□□□□ -1.74
BCCIP-204	ENST00000463330	AK2	P54819	239 aa		4.2	□□□□□ -1.74
BCCIP-204	ENST00000463330	FAM193A	P78312	1265 aa		4.2	□□□□□ -1.74
BCCIP-204	ENST00000463330	MEF2A	Q02078	507 aa	Predicted RBP	4.2	□□□□□ -1.74
BCCIP-204	ENST00000463330	FSTL1	Q12841	308 aa		4.2	□□□□□ -1.74
BCCIP-204	ENST00000463330	TARDBP	Q13148	414 aa	Known RBP eCLIP	4.2	□□□□□ -1.74
BCCIP-204	ENST00000463330	MRPL49	Q13405	166 aa	Known RBP	4.2	□□□□□ -1.74
BCCIP-204	ENST00000463330	KHDC1	Q4VXA5	237 aa	Known RBP	4.2	□□□□□ -1.74
BCCIP-204	ENST00000463330	METTL24	Q5JXM2	366 aa		4.2	□□□□□ -1.74
BCCIP-204	ENST00000463330	FAM83B	Q5T0W9	1011 aa		4.2	□□□□□ -1.74
BCCIP-204	ENST00000463330	DARS2	Q6PI48	645 aa	Known RBP	4.2	□□□□□ -1.74
BCCIP-204	ENST00000463330	APOA5	Q6Q788	366 aa		4.2	□□□□□ -1.74
BCCIP-204	ENST00000463330	TOGARAM2	Q6ZUX3	1019 aa		4.2	□□□□□ -1.74
BCCIP-204	ENST00000463330	MIGA2	Q7L4E1	593 aa		4.2	□□□□□ -1.74
BCCIP-204	ENST00000463330	DAAM2	Q86T65	1068 aa		4.2	□□□□□ -1.74
BCCIP-204	ENST00000463330	DRC7	Q8IY82	874 aa		4.2	□□□□□ -1.74
BCCIP-204	ENST00000463330	ZGPAT	Q8N5A5	531 aa	Known RBP	4.2	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms