RNA–Protein interactions for RNA: ENST00000462970.5

PSMD4-208, Transcript of proteasome 26S subunit, non-ATPase 4, human

TSL 5

Gene PSMD4, Length 900 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMD4-208	ENST00000462970	DDX27	Q96GQ7	796 aa	Known RBP	10.44	□□□□□ -0.74
PSMD4-208	ENST00000462970	NECAB3	Q96P71	396 aa	Predicted RBP	10.44	□□□□□ -0.74
PSMD4-208	ENST00000462970	ASB2	Q96Q27	587 aa		10.44	□□□□□ -0.74
PSMD4-208	ENST00000462970	CDCA3	Q99618	268 aa	Predicted RBP	10.44	□□□□□ -0.74
PSMD4-208	ENST00000462970	TSHZ2	Q9NRE2	1034 aa		10.44	□□□□□ -0.74
PSMD4-208	ENST00000462970	RBAK	Q9NYW8	714 aa	Predicted RBP	10.44	□□□□□ -0.74
PSMD4-208	ENST00000462970	STK39	Q9UEW8	545 aa		10.44	□□□□□ -0.74
PSMD4-208	ENST00000462970	UBQLN1	Q9UMX0	589 aa	Known RBP	10.44	□□□□□ -0.74
PSMD4-208	ENST00000462970	MAPK8IP1	Q9UQF2	711 aa		10.44	□□□□□ -0.74
PSMD4-208	ENST00000462970	STYXL1	Q9Y6J8	313 aa		10.44	□□□□□ -0.74
PSMD4-208	ENST00000462970	SCN1A	P35498	2009 aa		10.43	□□□□□ -0.74
PSMD4-208	ENST00000462970	CUL9	Q8IWT3	2517 aa		10.43	□□□□□ -0.74
PSMD4-208	ENST00000462970	TRAPPC3	O43617	180 aa		10.43	□□□□□ -0.74
PSMD4-208	ENST00000462970	EXTL3	O43909	919 aa		10.43	□□□□□ -0.74
PSMD4-208	ENST00000462970	FAM189A1	O60320	539 aa		10.43	□□□□□ -0.74
PSMD4-208	ENST00000462970	TBX10	O75333	385 aa		10.43	□□□□□ -0.74
PSMD4-208	ENST00000462970	PRPF40A	O75400	957 aa	Known RBP	10.43	□□□□□ -0.74
PSMD4-208	ENST00000462970	IL18RAP	O95256	599 aa		10.43	□□□□□ -0.74
PSMD4-208	ENST00000462970	LDHA	P00338	332 aa	Known RBP	10.43	□□□□□ -0.74
PSMD4-208	ENST00000462970	MYL1	P05976	194 aa		10.43	□□□□□ -0.74
PSMD4-208	ENST00000462970	CNP	P09543	421 aa	Known RBP	10.43	□□□□□ -0.74
PSMD4-208	ENST00000462970	GART	P22102	1010 aa		10.43	□□□□□ -0.74
PSMD4-208	ENST00000462970	HOXD13	P35453	343 aa		10.43	□□□□□ -0.74
PSMD4-208	ENST00000462970	TFAM	Q00059	246 aa	Known RBP	10.43	□□□□□ -0.74
PSMD4-208	ENST00000462970	DLX2	Q07687	328 aa	Predicted RBP	10.43	□□□□□ -0.74
PSMD4-208	ENST00000462970	DPYD	Q12882	1025 aa		10.43	□□□□□ -0.74
PSMD4-208	ENST00000462970	ELAVL2	Q12926	359 aa	Known RBP	10.43	□□□□□ -0.74
PSMD4-208	ENST00000462970	STK4	Q13043	487 aa		10.43	□□□□□ -0.74
PSMD4-208	ENST00000462970	PSMD2	Q13200	908 aa		10.43	□□□□□ -0.74
PSMD4-208	ENST00000462970	UPP1	Q16831	310 aa		10.43	□□□□□ -0.74
PSMD4-208	ENST00000462970	PTCRA	Q6ISU1	281 aa	Predicted RBP	10.43	□□□□□ -0.74
PSMD4-208	ENST00000462970	PALB2	Q86YC2	1186 aa		10.43	□□□□□ -0.74
PSMD4-208	ENST00000462970	CD302	Q8IX05	232 aa		10.43	□□□□□ -0.74
PSMD4-208	ENST00000462970	GPD1L	Q8N335	351 aa		10.43	□□□□□ -0.74
PSMD4-208	ENST00000462970	RDH13	Q8NBN7	331 aa		10.43	□□□□□ -0.74
PSMD4-208	ENST00000462970	ERCC4	Q92889	916 aa	Predicted RBP	10.43	□□□□□ -0.74
PSMD4-208	ENST00000462970	IPO9	Q96P70	1041 aa	Known RBP	10.43	□□□□□ -0.74
PSMD4-208	ENST00000462970	TTPAL	Q9BTX7	342 aa		10.43	□□□□□ -0.74
PSMD4-208	ENST00000462970	AGPAT3	Q9NRZ7	376 aa		10.43	□□□□□ -0.74
PSMD4-208	ENST00000462970	HSPBP1	Q9NZL4	362 aa		10.43	□□□□□ -0.74
PSMD4-208	ENST00000462970	CD207	Q9UJ71	328 aa		10.43	□□□□□ -0.74
PSMD4-208	ENST00000462970	HOOK1	Q9UJC3	728 aa	Known RBP	10.43	□□□□□ -0.74
PSMD4-208	ENST00000462970	SSX2IP	Q9Y2D8	614 aa		10.43	□□□□□ -0.74
PSMD4-208	ENST00000462970	NCOR1	O75376	2440 aa		10.43	□□□□□ -0.74
PSMD4-208	ENST00000462970	PPAN-P2RY11	A0A0B4J1V8	794 aa	Predicted RBP	10.42	□□□□□ -0.74
PSMD4-208	ENST00000462970	FSD2	A1L4K1	749 aa		10.42	□□□□□ -0.74
PSMD4-208	ENST00000462970	CLSTN1	O94985	981 aa		10.42	□□□□□ -0.74
PSMD4-208	ENST00000462970	SMC2	O95347	1197 aa		10.42	□□□□□ -0.74
PSMD4-208	ENST00000462970	GLP2R	O95838	553 aa		10.42	□□□□□ -0.74
PSMD4-208	ENST00000462970	ADH1A	P07327	375 aa		10.42	□□□□□ -0.74
PSMD4-208	ENST00000462970	SPATA31D3	P0C874	917 aa		10.42	□□□□□ -0.74
PSMD4-208	ENST00000462970	EPCAM	P16422	314 aa		10.42	□□□□□ -0.74
PSMD4-208	ENST00000462970	TKT	P29401	623 aa	Known RBP	10.42	□□□□□ -0.74
PSMD4-208	ENST00000462970	RPL9	P32969	192 aa	Known RBP	10.42	□□□□□ -0.74
PSMD4-208	ENST00000462970	LTBR	P36941	435 aa		10.42	□□□□□ -0.74
PSMD4-208	ENST00000462970	ARPP19	P56211	112 aa		10.42	□□□□□ -0.74
PSMD4-208	ENST00000462970	DSG1	Q02413	1049 aa		10.42	□□□□□ -0.74
PSMD4-208	ENST00000462970	EHHADH	Q08426	723 aa		10.42	□□□□□ -0.74
PSMD4-208	ENST00000462970	SNW1	Q13573	536 aa	Known RBP	10.42	□□□□□ -0.74
PSMD4-208	ENST00000462970	PSMD5	Q16401	504 aa		10.42	□□□□□ -0.74
PSMD4-208	ENST00000462970	KNOP1	Q1ED39	458 aa	Known RBP	10.42	□□□□□ -0.74
PSMD4-208	ENST00000462970	RTP2	Q5QGT7	225 aa		10.42	□□□□□ -0.74
PSMD4-208	ENST00000462970	CRELD2	Q6UXH1	353 aa	Predicted RBP	10.42	□□□□□ -0.74
PSMD4-208	ENST00000462970	DSTYK	Q6XUX3	929 aa		10.42	□□□□□ -0.74
PSMD4-208	ENST00000462970	SPATA31D4	Q6ZUB0	917 aa		10.42	□□□□□ -0.74
PSMD4-208	ENST00000462970	KIAA0895	Q8NCT3	520 aa		10.42	□□□□□ -0.74
PSMD4-208	ENST00000462970	C3orf58	Q8NDZ4	430 aa		10.42	□□□□□ -0.74
PSMD4-208	ENST00000462970	ENGASE	Q8NFI3	743 aa		10.42	□□□□□ -0.74
PSMD4-208	ENST00000462970	VN1R2	Q8NFZ6	395 aa		10.42	□□□□□ -0.74
PSMD4-208	ENST00000462970	ADAMTS19	Q8TE59	1207 aa		10.42	□□□□□ -0.74
PSMD4-208	ENST00000462970	CASP10	Q92851	521 aa		10.42	□□□□□ -0.74
PSMD4-208	ENST00000462970	SMARCE1	Q969G3	411 aa		10.42	□□□□□ -0.74
PSMD4-208	ENST00000462970	FAM84A	Q96KN4	292 aa		10.42	□□□□□ -0.74
PSMD4-208	ENST00000462970	KLHL5	Q96PQ7	755 aa		10.42	□□□□□ -0.74
PSMD4-208	ENST00000462970	PDE11A	Q9HCR9	933 aa		10.42	□□□□□ -0.74
PSMD4-208	ENST00000462970	DPP3	Q9NY33	737 aa		10.42	□□□□□ -0.74
PSMD4-208	ENST00000462970	HCFC2	Q9Y5Z7	792 aa		10.42	□□□□□ -0.74
PSMD4-208	ENST00000462970	MTCL1	Q9Y4B5	1905 aa	Known RBP	10.42	□□□□□ -0.74
PSMD4-208	ENST00000462970	TTC28	Q96AY4	2481 aa		10.41	□□□□□ -0.74
PSMD4-208	ENST00000462970	ZNF233	A6NK53	670 aa		10.41	□□□□□ -0.74
PSMD4-208	ENST00000462970	TMEM189-UBE2V1	I3L0A0	370 aa		10.41	□□□□□ -0.74
PSMD4-208	ENST00000462970	TNFRSF10A	O00220	468 aa		10.41	□□□□□ -0.74
PSMD4-208	ENST00000462970	PPEF2	O14830	753 aa		10.41	□□□□□ -0.74
PSMD4-208	ENST00000462970	TEX28	O15482	410 aa		10.41	□□□□□ -0.74
PSMD4-208	ENST00000462970	TGFB1I1	O43294	461 aa		10.41	□□□□□ -0.74
PSMD4-208	ENST00000462970	EXOC3	O60645	756 aa		10.41	□□□□□ -0.74
PSMD4-208	ENST00000462970	KIF20A	O95235	890 aa		10.41	□□□□□ -0.74
PSMD4-208	ENST00000462970	TMEM191B	P0C7N4	346 aa		10.41	□□□□□ -0.74
PSMD4-208	ENST00000462970	WNT7B	P56706	349 aa		10.41	□□□□□ -0.74
PSMD4-208	ENST00000462970	CREM	Q03060	361 aa		10.41	□□□□□ -0.74
PSMD4-208	ENST00000462970	CTC1	Q2NKJ3	1217 aa		10.41	□□□□□ -0.74
PSMD4-208	ENST00000462970	LEXM	Q3ZCV2	418 aa		10.41	□□□□□ -0.74
PSMD4-208	ENST00000462970	RARS2	Q5T160	578 aa	Known RBP	10.41	□□□□□ -0.74
PSMD4-208	ENST00000462970	KIAA0319	Q5VV43	1072 aa		10.41	□□□□□ -0.74
PSMD4-208	ENST00000462970	SPATA1	Q5VX52	437 aa		10.41	□□□□□ -0.74
PSMD4-208	ENST00000462970	LMBRD2	Q68DH5	695 aa	Predicted RBP	10.41	□□□□□ -0.74
PSMD4-208	ENST00000462970	ISM2	Q6H9L7	571 aa		10.41	□□□□□ -0.74
PSMD4-208	ENST00000462970	ANKRD54	Q6NXT1	300 aa		10.41	□□□□□ -0.74
PSMD4-208	ENST00000462970	PDZRN4	Q6ZMN7	1036 aa	Predicted RBP	10.41	□□□□□ -0.74
PSMD4-208	ENST00000462970	PPFIBP1	Q86W92	1011 aa		10.41	□□□□□ -0.74

Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms