RNA–Protein interactions for RNA: ENST00000462553.2

CDC42BPA-210, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 430 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-210ENST00000462553 CD300LGQ6UXG3 332 aa8.72□□□□□ -1.01
CDC42BPA-210ENST00000462553 RSPO2Q6UXX9 243 aaPredicted RBP8.72□□□□□ -1.01
CDC42BPA-210ENST00000462553 DTHD1Q6ZMT9 781 aa8.72□□□□□ -1.01
CDC42BPA-210ENST00000462553 C1orf210Q8IVY1 113 aa8.72□□□□□ -1.01
CDC42BPA-210ENST00000462553 SUMF1Q8NBK3 374 aa8.72□□□□□ -1.01
CDC42BPA-210ENST00000462553 ITFG1Q8TB96 612 aa8.72□□□□□ -1.01
CDC42BPA-210ENST00000462553 FGF13Q92913 245 aa8.72□□□□□ -1.01
CDC42BPA-210ENST00000462553 RNF166Q96A37 237 aaPredicted RBP8.72□□□□□ -1.01
CDC42BPA-210ENST00000462553 PNMA5Q96PV4 448 aa8.72□□□□□ -1.01
CDC42BPA-210ENST00000462553 NACC1Q96RE7 527 aa8.72□□□□□ -1.01
CDC42BPA-210ENST00000462553 SEMA4AQ9H3S1 761 aa8.72□□□□□ -1.01
CDC42BPA-210ENST00000462553 DDX19AQ9NUU7 478 aaKnown RBP8.72□□□□□ -1.01
CDC42BPA-210ENST00000462553 PRMT7Q9NVM4 692 aaPredicted RBP8.72□□□□□ -1.01
CDC42BPA-210ENST00000462553 HCFC1R1Q9NWW0 138 aa8.72□□□□□ -1.01
CDC42BPA-210ENST00000462553 SNTG2Q9NY99 539 aa8.72□□□□□ -1.01
CDC42BPA-210ENST00000462553 KIAA1024Q9UPX6 916 aa8.72□□□□□ -1.01
CDC42BPA-210ENST00000462553 USP20Q9Y2K6 914 aa8.72□□□□□ -1.01
CDC42BPA-210ENST00000462553 SIT1Q9Y3P8 196 aa8.72□□□□□ -1.01
CDC42BPA-210ENST00000462553 CLIC4Q9Y696 253 aa8.72□□□□□ -1.01
CDC42BPA-210ENST00000462553 ZFP37Q9Y6Q3 630 aaPredicted RBP8.72□□□□□ -1.01
CDC42BPA-210ENST00000462553 OBSL1O75147 1896 aa8.71□□□□□ -1.01
CDC42BPA-210ENST00000462553 MED19A0JLT2 244 aaPredicted RBP8.71□□□□□ -1.02
CDC42BPA-210ENST00000462553 VWA3AA6NCI4 1184 aa8.71□□□□□ -1.02
CDC42BPA-210ENST00000462553 SHISA7A6NL88 538 aa8.71□□□□□ -1.02
CDC42BPA-210ENST00000462553 TMEM189-UBE2V1I3L0A0 370 aa8.71□□□□□ -1.02
CDC42BPA-210ENST00000462553 N4BP3O15049 544 aa8.71□□□□□ -1.02
CDC42BPA-210ENST00000462553 TADA2AO75478 443 aa8.71□□□□□ -1.02
CDC42BPA-210ENST00000462553 FGFR3P22607 806 aa8.71□□□□□ -1.02
CDC42BPA-210ENST00000462553 RFX1P22670 979 aa8.71□□□□□ -1.02
CDC42BPA-210ENST00000462553 NCBP1Q09161 790 aaKnown RBP8.71□□□□□ -1.02
CDC42BPA-210ENST00000462553 PKP1Q13835 747 aa8.71□□□□□ -1.02
CDC42BPA-210ENST00000462553 MLF2Q15773 248 aaPredicted RBP8.71□□□□□ -1.02
CDC42BPA-210ENST00000462553 SLC5A9Q2M3M2 681 aa8.71□□□□□ -1.02
CDC42BPA-210ENST00000462553 TMEM119Q4V9L6 283 aa8.71□□□□□ -1.02
CDC42BPA-210ENST00000462553 PPM1LQ5SGD2 360 aa8.71□□□□□ -1.02
CDC42BPA-210ENST00000462553 LIN9Q5TKA1 542 aa8.71□□□□□ -1.02
CDC42BPA-210ENST00000462553 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.71□□□□□ -1.02
CDC42BPA-210ENST00000462553 MAEAQ7L5Y9 396 aa8.71□□□□□ -1.02
CDC42BPA-210ENST00000462553 NPAS3Q8IXF0 933 aa8.71□□□□□ -1.02
CDC42BPA-210ENST00000462553 KIAA2013Q8IYS2 634 aa8.71□□□□□ -1.02
CDC42BPA-210ENST00000462553 C3orf58Q8NDZ4 430 aa8.71□□□□□ -1.02
CDC42BPA-210ENST00000462553 MCPH1Q8NEM0 835 aa8.71□□□□□ -1.02
CDC42BPA-210ENST00000462553 SLC7A14Q8TBB6 771 aa8.71□□□□□ -1.02
CDC42BPA-210ENST00000462553 DDX27Q96GQ7 796 aaKnown RBP8.71□□□□□ -1.02
CDC42BPA-210ENST00000462553 CCDC43Q96MW1 224 aaKnown RBP8.71□□□□□ -1.02
CDC42BPA-210ENST00000462553 PPP1R10Q96QC0 940 aaKnown RBP8.71□□□□□ -1.02
CDC42BPA-210ENST00000462553 USP28Q96RU2 1077 aa8.71□□□□□ -1.02
CDC42BPA-210ENST00000462553 KXD1Q9BQD3 176 aa8.71□□□□□ -1.02
CDC42BPA-210ENST00000462553 KIFC3Q9BVG8 833 aa8.71□□□□□ -1.02
CDC42BPA-210ENST00000462553 RAB34Q9BZG1 259 aa8.71□□□□□ -1.02
CDC42BPA-210ENST00000462553 MTRRQ9UBK8 725 aa8.71□□□□□ -1.02
CDC42BPA-210ENST00000462553 MTF2Q9Y483 593 aaPredicted RBP8.71□□□□□ -1.02
CDC42BPA-210ENST00000462553 MORC2Q9Y6X9 1032 aaPredicted RBP8.71□□□□□ -1.02
CDC42BPA-210ENST00000462553 EML5Q05BV3 1969 aa8.7□□□□□ -1.02
CDC42BPA-210ENST00000462553 KANSL1LA0AUZ9 987 aa8.7□□□□□ -1.02
CDC42BPA-210ENST00000462553 ARHGEF35A5YM69 484 aa8.7□□□□□ -1.02
CDC42BPA-210ENST00000462553 E9PMD0 336 aa8.7□□□□□ -1.02
CDC42BPA-210ENST00000462553 NRG2O14511 850 aaPredicted RBP8.7□□□□□ -1.02
CDC42BPA-210ENST00000462553 BMP15O95972 392 aa8.7□□□□□ -1.02
CDC42BPA-210ENST00000462553 PRKCBP05771 671 aa8.7□□□□□ -1.02
CDC42BPA-210ENST00000462553 THP07101 528 aa8.7□□□□□ -1.02
CDC42BPA-210ENST00000462553 HOXB3P14651 431 aaPredicted RBP8.7□□□□□ -1.02
CDC42BPA-210ENST00000462553 CYP11B2P19099 503 aa8.7□□□□□ -1.02
CDC42BPA-210ENST00000462553 SOX4Q06945 474 aaPredicted RBP8.7□□□□□ -1.02
CDC42BPA-210ENST00000462553 ELAVL2Q12926 359 aaKnown RBP8.7□□□□□ -1.02
CDC42BPA-210ENST00000462553 MAPK7Q13164 816 aa8.7□□□□□ -1.02
CDC42BPA-210ENST00000462553 PRPF4BQ13523 1007 aaKnown RBP8.7□□□□□ -1.02
CDC42BPA-210ENST00000462553 SNW1Q13573 536 aaKnown RBP8.7□□□□□ -1.02
CDC42BPA-210ENST00000462553 RAB33AQ14088 237 aa8.7□□□□□ -1.02
CDC42BPA-210ENST00000462553 GLRA4Q5JXX5 417 aa8.7□□□□□ -1.02
CDC42BPA-210ENST00000462553 AXDND1Q5T1B0 1012 aaPredicted RBP8.7□□□□□ -1.02
CDC42BPA-210ENST00000462553 KRT79Q5XKE5 535 aa8.7□□□□□ -1.02
CDC42BPA-210ENST00000462553 ZC3H14Q6PJT7 736 aaKnown RBP8.7□□□□□ -1.02
CDC42BPA-210ENST00000462553 PADI6Q6TGC4 694 aa8.7□□□□□ -1.02
CDC42BPA-210ENST00000462553 MTSS1LQ765P7 747 aa8.7□□□□□ -1.02
CDC42BPA-210ENST00000462553 CEP57Q86XR8 500 aa8.7□□□□□ -1.02
CDC42BPA-210ENST00000462553 ZBTB8OSQ8IWT0 167 aa8.7□□□□□ -1.02
CDC42BPA-210ENST00000462553 DAW1Q8N136 415 aa8.7□□□□□ -1.02
CDC42BPA-210ENST00000462553 DCLK2Q8N568 766 aa8.7□□□□□ -1.02
CDC42BPA-210ENST00000462553 KCNG4Q8TDN1 519 aa8.7□□□□□ -1.02
CDC42BPA-210ENST00000462553 RUSC1Q9BVN2 902 aa8.7□□□□□ -1.02
CDC42BPA-210ENST00000462553 C2orf40Q9H1Z8 148 aa8.7□□□□□ -1.02
CDC42BPA-210ENST00000462553 BHMT2Q9H2M3 363 aa8.7□□□□□ -1.02
CDC42BPA-210ENST00000462553 GOLGA2P5Q9HBQ8 144 aa8.7□□□□□ -1.02
CDC42BPA-210ENST00000462553 DNMT3BQ9UBC3 853 aaKnown RBP8.7□□□□□ -1.02
CDC42BPA-210ENST00000462553 FBXO2Q9UK22 296 aaPredicted RBP8.7□□□□□ -1.02
CDC42BPA-210ENST00000462553 STK24Q9Y6E0 443 aa8.7□□□□□ -1.02
CDC42BPA-210ENST00000462553 ZZEF1O43149 2961 aa8.7□□□□□ -1.02
CDC42BPA-210ENST00000462553 SDK1Q7Z5N4 2213 aa8.69□□□□□ -1.02
CDC42BPA-210ENST00000462553 WDFY3Q8IZQ1 3526 aa8.69□□□□□ -1.02
CDC42BPA-210ENST00000462553 I3L4J1 428 aa8.69□□□□□ -1.02
CDC42BPA-210ENST00000462553 ACKR2O00590 384 aa8.69□□□□□ -1.02
CDC42BPA-210ENST00000462553 MEFVO15553 781 aaPredicted RBP8.69□□□□□ -1.02
CDC42BPA-210ENST00000462553 XYLBO75191 536 aa8.69□□□□□ -1.02
CDC42BPA-210ENST00000462553 CEBPBP17676 345 aa8.69□□□□□ -1.02
CDC42BPA-210ENST00000462553 CD72P21854 359 aa8.69□□□□□ -1.02
CDC42BPA-210ENST00000462553 FCARP24071 287 aa8.69□□□□□ -1.02
CDC42BPA-210ENST00000462553 TKTP29401 623 aaKnown RBP8.69□□□□□ -1.02
CDC42BPA-210ENST00000462553 OR1D2P34982 312 aa8.69□□□□□ -1.02
CDC42BPA-210ENST00000462553 NAMPTP43490 491 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms