RNA–Protein interactions for RNA: ENST00000461897.5

COL4A6-204, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,889 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-204ENST00000461897 DNAAF5Q86Y56 855 aa13.34□□□□□ -0.27
COL4A6-204ENST00000461897 CBWD2Q8IUF1 395 aa13.34□□□□□ -0.27
COL4A6-204ENST00000461897 PPTC7Q8NI37 304 aa13.34□□□□□ -0.27
COL4A6-204ENST00000461897 AFG1LQ8WV93 481 aa13.34□□□□□ -0.27
COL4A6-204ENST00000461897 TRAPPC12Q8WVT3 735 aa13.34□□□□□ -0.27
COL4A6-204ENST00000461897 CTNNBL1Q8WYA6 563 aaPredicted RBP13.34□□□□□ -0.27
COL4A6-204ENST00000461897 SAAL1Q96ER3 474 aa13.34□□□□□ -0.27
COL4A6-204ENST00000461897 CYFIP2Q96F07 1278 aa13.34□□□□□ -0.27
COL4A6-204ENST00000461897 ABHD16BQ9H3Z7 469 aa13.34□□□□□ -0.27
COL4A6-204ENST00000461897 APEX2Q9UBZ4 518 aa13.34□□□□□ -0.27
COL4A6-204ENST00000461897 KCNG1Q9UIX4 513 aa13.34□□□□□ -0.27
COL4A6-204ENST00000461897 TULP1O00294 542 aaPredicted RBP13.33□□□□□ -0.27
COL4A6-204ENST00000461897 FGGP02679 453 aa13.33□□□□□ -0.27
COL4A6-204ENST00000461897 EDN1P05305 212 aa13.33□□□□□ -0.27
COL4A6-204ENST00000461897 KRT13P13646 458 aa13.33□□□□□ -0.27
COL4A6-204ENST00000461897 HSPA6P17066 643 aa13.33□□□□□ -0.27
COL4A6-204ENST00000461897 SMPD1P17405 629 aa13.33□□□□□ -0.27
COL4A6-204ENST00000461897 HNRNPH1P31943 449 aaKnown RBP13.33□□□□□ -0.27
COL4A6-204ENST00000461897 ABCD1P33897 745 aa13.33□□□□□ -0.27
COL4A6-204ENST00000461897 VAMP7P51809 220 aa13.33□□□□□ -0.27
COL4A6-204ENST00000461897 SEC24CP53992 1094 aa13.33□□□□□ -0.27
COL4A6-204ENST00000461897 MAP2K5Q13163 448 aa13.33□□□□□ -0.27
COL4A6-204ENST00000461897 ACVR2BQ13705 512 aa13.33□□□□□ -0.27
COL4A6-204ENST00000461897 DHX34Q14147 1143 aaKnown RBP13.33□□□□□ -0.27
COL4A6-204ENST00000461897 SNRNP35Q16560 246 aaKnown RBP13.33□□□□□ -0.27
COL4A6-204ENST00000461897 C11orf63Q6NUN7 778 aa13.33□□□□□ -0.27
COL4A6-204ENST00000461897 GLYCTKQ8IVS8 523 aa13.33□□□□□ -0.27
COL4A6-204ENST00000461897 LRRC71Q8N4P6 559 aa13.33□□□□□ -0.27
COL4A6-204ENST00000461897 DEPTORQ8TB45 409 aa13.33□□□□□ -0.27
COL4A6-204ENST00000461897 PRPF31Q8WWY3 499 aaKnown RBP13.33□□□□□ -0.27
COL4A6-204ENST00000461897 CENPTQ96BT3 561 aa13.33□□□□□ -0.27
COL4A6-204ENST00000461897 FBXL18Q96ME1 805 aa13.33□□□□□ -0.27
COL4A6-204ENST00000461897 INTS2Q9H0H0 1204 aaKnown RBP13.33□□□□□ -0.27
COL4A6-204ENST00000461897 RNPEPQ9H4A4 650 aa13.33□□□□□ -0.27
COL4A6-204ENST00000461897 CNOT10Q9H9A5 744 aaKnown RBP13.33□□□□□ -0.27
COL4A6-204ENST00000461897 OSGEPQ9NPF4 335 aa13.33□□□□□ -0.27
COL4A6-204ENST00000461897 ZDHHC18Q9NUE0 388 aa13.33□□□□□ -0.27
COL4A6-204ENST00000461897 ERAP1Q9NZ08 941 aa13.33□□□□□ -0.27
COL4A6-204ENST00000461897 TRPC6Q9Y210 931 aa13.33□□□□□ -0.27
COL4A6-204ENST00000461897 USP20Q9Y2K6 914 aa13.33□□□□□ -0.27
COL4A6-204ENST00000461897 INHBEP58166 350 aa13.33□□□□□ -0.28
COL4A6-204ENST00000461897 MYL7Q01449 175 aa13.33□□□□□ -0.28
COL4A6-204ENST00000461897 PPP3CAQ08209 521 aa13.33□□□□□ -0.28
COL4A6-204ENST00000461897 DUSP28Q4G0W2 176 aa13.33□□□□□ -0.28
COL4A6-204ENST00000461897 RHOT2Q8IXI1 618 aa13.33□□□□□ -0.28
COL4A6-204ENST00000461897 OR2W6PQ8NHA6 318 aa13.33□□□□□ -0.28
COL4A6-204ENST00000461897 LMO3Q8TAP4 145 aa13.33□□□□□ -0.28
COL4A6-204ENST00000461897 POMGNT1Q8WZA1 660 aa13.33□□□□□ -0.28
COL4A6-204ENST00000461897 USP6NLQ92738 828 aa13.33□□□□□ -0.28
COL4A6-204ENST00000461897 ZBTB10Q96DT7 871 aa13.33□□□□□ -0.28
COL4A6-204ENST00000461897 BICD1Q96G01 975 aa13.33□□□□□ -0.28
COL4A6-204ENST00000461897 ZIC5Q96T25 663 aa13.33□□□□□ -0.28
COL4A6-204ENST00000461897 FMO2Q99518 471 aa13.33□□□□□ -0.28
COL4A6-204ENST00000461897 ERP44Q9BS26 406 aa13.33□□□□□ -0.28
COL4A6-204ENST00000461897 FLRT1Q9NZU1 646 aa13.33□□□□□ -0.28
COL4A6-204ENST00000461897 GOLGA6L10A0A0M3HER8 536 aa13.32□□□□□ -0.28
COL4A6-204ENST00000461897 MIF4GDA9UHW6 222 aaKnown RBP13.32□□□□□ -0.28
COL4A6-204ENST00000461897 E7EVH7 732 aa13.32□□□□□ -0.28
COL4A6-204ENST00000461897 KIF3CO14782 793 aa13.32□□□□□ -0.28
COL4A6-204ENST00000461897 P4HA2O15460 535 aa13.32□□□□□ -0.28
COL4A6-204ENST00000461897 GAS2O43903 313 aaKnown RBP13.32□□□□□ -0.28
COL4A6-204ENST00000461897 HBP1O60381 514 aa13.32□□□□□ -0.28
COL4A6-204ENST00000461897 PIGRP01833 764 aa13.32□□□□□ -0.28
COL4A6-204ENST00000461897 HOXC6P09630 235 aa13.32□□□□□ -0.28
COL4A6-204ENST00000461897 ZNF286BP0CG31 522 aa13.32□□□□□ -0.28
COL4A6-204ENST00000461897 GARTP22102 1010 aa13.32□□□□□ -0.28
COL4A6-204ENST00000461897 SCP2P22307 547 aa13.32□□□□□ -0.28
COL4A6-204ENST00000461897 GBP1P32455 592 aa13.32□□□□□ -0.28
COL4A6-204ENST00000461897 ACTN3Q08043 901 aaPredicted RBP13.32□□□□□ -0.28
COL4A6-204ENST00000461897 DHX9Q08211 1270 aaKnown RBP13.32□□□□□ -0.28
COL4A6-204ENST00000461897 IER5Q5VY09 327 aa13.32□□□□□ -0.28
COL4A6-204ENST00000461897 UBLCP1Q8WVY7 318 aaPredicted RBP13.32□□□□□ -0.28
COL4A6-204ENST00000461897 C16orf70Q9BSU1 422 aa13.32□□□□□ -0.28
COL4A6-204ENST00000461897 EPB41L4BQ9H329 900 aa13.32□□□□□ -0.28
COL4A6-204ENST00000461897 ACTR5Q9H9F9 607 aaPredicted RBP13.32□□□□□ -0.28
COL4A6-204ENST00000461897 SLC5A4Q9NY91 659 aa13.32□□□□□ -0.28
COL4A6-204ENST00000461897 EVPLQ92817 2033 aa13.32□□□□□ -0.28
COL4A6-204ENST00000461897 PMM2O15305 246 aa13.31□□□□□ -0.28
COL4A6-204ENST00000461897 ADCY3O60266 1144 aa13.31□□□□□ -0.28
COL4A6-204ENST00000461897 MTA2O94776 668 aa13.31□□□□□ -0.28
COL4A6-204ENST00000461897 HOXD8P13378 290 aaPredicted RBP13.31□□□□□ -0.28
COL4A6-204ENST00000461897 TNFAIP3P21580 790 aa13.31□□□□□ -0.28
COL4A6-204ENST00000461897 HPDP32754 393 aaPredicted RBP13.31□□□□□ -0.28
COL4A6-204ENST00000461897 LIG4P49917 911 aa13.31□□□□□ -0.28
COL4A6-204ENST00000461897 LAMTOR4Q0VGL1 99 aa13.31□□□□□ -0.28
COL4A6-204ENST00000461897 STRN3Q13033 797 aa13.31□□□□□ -0.28
COL4A6-204ENST00000461897 CRHR2Q13324 411 aa13.31□□□□□ -0.28
COL4A6-204ENST00000461897 CDCA2Q69YH5 1023 aaPredicted RBP13.31□□□□□ -0.28
COL4A6-204ENST00000461897 TAX1BP1Q86VP1 789 aa13.31□□□□□ -0.28
COL4A6-204ENST00000461897 P3H4Q92791 437 aa13.31□□□□□ -0.28
COL4A6-204ENST00000461897 ARHGEF26Q96DR7 871 aa13.31□□□□□ -0.28
COL4A6-204ENST00000461897 CELF4Q9BZC1 486 aaKnown RBP13.31□□□□□ -0.28
COL4A6-204ENST00000461897 HAPLN2Q9GZV7 340 aa13.31□□□□□ -0.28
COL4A6-204ENST00000461897 TMEM134Q9H6X4 195 aa13.31□□□□□ -0.28
COL4A6-204ENST00000461897 YY1AP1Q9H869 796 aa13.31□□□□□ -0.28
COL4A6-204ENST00000461897 GPBP1L1Q9HC44 474 aaPredicted RBP13.31□□□□□ -0.28
COL4A6-204ENST00000461897 CNOT8Q9UFF9 292 aaKnown RBP13.31□□□□□ -0.28
COL4A6-204ENST00000461897 ABT1Q9ULW3 272 aaKnown RBP13.31□□□□□ -0.28
COL4A6-204ENST00000461897 NR2E1Q9Y466 385 aa13.31□□□□□ -0.28
COL4A6-204ENST00000461897 STYXL1Q9Y6J8 313 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms