RNA–Protein interactions for RNA: ENST00000461620.1

SLC48A1-203, Transcript of solute carrier family 48 member 1, humanhuman

TSL 4

Gene SLC48A1, Length 459 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC48A1-203ENST00000461620 MRPL38Q96DV4 380 aaKnown RBP17.15■□□□□ 0.34
SLC48A1-203ENST00000461620 CGRRF1Q99675 332 aa17.15■□□□□ 0.34
SLC48A1-203ENST00000461620 PRDM12Q9H4Q4 367 aa17.15■□□□□ 0.34
SLC48A1-203ENST00000461620 CERS4Q9HA82 394 aa17.15■□□□□ 0.34
SLC48A1-203ENST00000461620 PDE11AQ9HCR9 933 aa17.15■□□□□ 0.34
SLC48A1-203ENST00000461620 INTS13Q9NVM9 706 aa17.15■□□□□ 0.34
SLC48A1-203ENST00000461620 TMEM63CQ9P1W3 806 aa17.15■□□□□ 0.34
SLC48A1-203ENST00000461620 ADAM28Q9UKQ2 775 aa17.15■□□□□ 0.34
SLC48A1-203ENST00000461620 SF3B1O75533 1304 aaKnown RBP eCLIP17.15■□□□□ 0.34
SLC48A1-203ENST00000461620 LAMA3Q16787 3333 aa17.14■□□□□ 0.34
SLC48A1-203ENST00000461620 RALGAPA2Q2PPJ7 1873 aa17.14■□□□□ 0.33
SLC48A1-203ENST00000461620 CASTOR2A6NHX0 329 aa17.14■□□□□ 0.33
SLC48A1-203ENST00000461620 AKAP3O75969 853 aa17.14■□□□□ 0.33
SLC48A1-203ENST00000461620 NFICP08651 508 aa17.14■□□□□ 0.33
SLC48A1-203ENST00000461620 TNNI1P19237 187 aa17.14■□□□□ 0.33
SLC48A1-203ENST00000461620 GTF2H1P32780 548 aa17.14■□□□□ 0.33
SLC48A1-203ENST00000461620 CLCNKBP51801 687 aa17.14■□□□□ 0.33
SLC48A1-203ENST00000461620 TFAMQ00059 246 aaKnown RBP17.14■□□□□ 0.33
SLC48A1-203ENST00000461620 STX1AQ16623 288 aa17.14■□□□□ 0.33
SLC48A1-203ENST00000461620 TTI2Q6NXR4 508 aa17.14■□□□□ 0.33
SLC48A1-203ENST00000461620 CSGALNACT2Q8N6G5 542 aa17.14■□□□□ 0.33
SLC48A1-203ENST00000461620 PARD3BQ8TEW8 1205 aa17.14■□□□□ 0.33
SLC48A1-203ENST00000461620 POF1BQ8WVV4 589 aa17.14■□□□□ 0.33
SLC48A1-203ENST00000461620 TLR9Q9NR96 1032 aa17.14■□□□□ 0.33
SLC48A1-203ENST00000461620 MTMR10Q9NXD2 777 aa17.14■□□□□ 0.33
SLC48A1-203ENST00000461620 DPP3Q9NY33 737 aa17.14■□□□□ 0.33
SLC48A1-203ENST00000461620 HCSTQ9UBK5 93 aa17.14■□□□□ 0.33
SLC48A1-203ENST00000461620 PRG3Q9Y2Y8 225 aaPredicted RBP17.14■□□□□ 0.33
SLC48A1-203ENST00000461620 NUB1Q9Y5A7 615 aa17.14■□□□□ 0.33
SLC48A1-203ENST00000461620 ANO9A1A5B4 782 aa17.13■□□□□ 0.33
SLC48A1-203ENST00000461620 NT5C1B-RDH14C9J2C7 533 aa17.13■□□□□ 0.33
SLC48A1-203ENST00000461620 LPXNO60711 386 aa17.13■□□□□ 0.33
SLC48A1-203ENST00000461620 SOD2P04179 222 aa17.13■□□□□ 0.33
SLC48A1-203ENST00000461620 RBP5P82980 135 aa17.13■□□□□ 0.33
SLC48A1-203ENST00000461620 CREMQ03060 361 aa17.13■□□□□ 0.33
SLC48A1-203ENST00000461620 SOX4Q06945 474 aaPredicted RBP17.13■□□□□ 0.33
SLC48A1-203ENST00000461620 USP41Q3LFD5 358 aa17.13■□□□□ 0.33
SLC48A1-203ENST00000461620 TIGD5Q53EQ6 642 aa17.13■□□□□ 0.33
SLC48A1-203ENST00000461620 FUT10Q6P4F1 479 aa17.13■□□□□ 0.33
SLC48A1-203ENST00000461620 FRMD5Q7Z6J6 570 aa17.13■□□□□ 0.33
SLC48A1-203ENST00000461620 LRRC52Q8N7C0 313 aa17.13■□□□□ 0.33
SLC48A1-203ENST00000461620 ZSWIM2Q8NEG5 633 aa17.13■□□□□ 0.33
SLC48A1-203ENST00000461620 C18orf25Q96B23 403 aaPredicted RBP17.13■□□□□ 0.33
SLC48A1-203ENST00000461620 ZNF560Q96MR9 790 aa17.13■□□□□ 0.33
SLC48A1-203ENST00000461620 NAT10Q9H0A0 1025 aaKnown RBP17.13■□□□□ 0.33
SLC48A1-203ENST00000461620 CXCL16Q9H2A7 254 aa17.13■□□□□ 0.33
SLC48A1-203ENST00000461620 ALG13Q9NP73 1137 aaKnown RBP17.13■□□□□ 0.33
SLC48A1-203ENST00000461620 CTNND2Q9UQB3 1225 aa17.13■□□□□ 0.33
SLC48A1-203ENST00000461620 IRAK3Q9Y616 596 aa17.13■□□□□ 0.33
SLC48A1-203ENST00000461620 CITO14578 2027 aa17.13■□□□□ 0.33
SLC48A1-203ENST00000461620 GBF1Q92538 1859 aa17.12■□□□□ 0.33
SLC48A1-203ENST00000461620 PIRO00625 290 aa17.12■□□□□ 0.33
SLC48A1-203ENST00000461620 GRM6O15303 877 aa17.12■□□□□ 0.33
SLC48A1-203ENST00000461620 NCK2O43639 380 aa17.12■□□□□ 0.33
SLC48A1-203ENST00000461620 B4GALT3O60512 393 aa17.12■□□□□ 0.33
SLC48A1-203ENST00000461620 EFEMP2O95967 443 aa17.12■□□□□ 0.33
SLC48A1-203ENST00000461620 CCDC192P0DO97 292 aa17.12■□□□□ 0.33
SLC48A1-203ENST00000461620 DLATP10515 647 aaKnown RBP17.12■□□□□ 0.33
SLC48A1-203ENST00000461620 PBX3P40426 434 aa17.12■□□□□ 0.33
SLC48A1-203ENST00000461620 CASP4P49662 377 aa17.12■□□□□ 0.33
SLC48A1-203ENST00000461620 VAMP7P51809 220 aa17.12■□□□□ 0.33
SLC48A1-203ENST00000461620 PMS1P54277 932 aaKnown RBP17.12■□□□□ 0.33
SLC48A1-203ENST00000461620 BFSP1Q12934 665 aa17.12■□□□□ 0.33
SLC48A1-203ENST00000461620 MYO1EQ12965 1108 aa17.12■□□□□ 0.33
SLC48A1-203ENST00000461620 TPD52L1Q16890 204 aaPredicted RBP17.12■□□□□ 0.33
SLC48A1-203ENST00000461620 DPCR1Q3MIW9 517 aa17.12■□□□□ 0.33
SLC48A1-203ENST00000461620 EFCAB13Q8IY85 973 aa17.12■□□□□ 0.33
SLC48A1-203ENST00000461620 RNF168Q8IYW5 571 aaPredicted RBP17.12■□□□□ 0.33
SLC48A1-203ENST00000461620 GDPD5Q8WTR4 605 aa17.12■□□□□ 0.33
SLC48A1-203ENST00000461620 CCDC127Q96BQ5 260 aa17.12■□□□□ 0.33
SLC48A1-203ENST00000461620 CDX2Q99626 313 aaPredicted RBP17.12■□□□□ 0.33
SLC48A1-203ENST00000461620 DUSP9Q99956 384 aaKnown RBP17.12■□□□□ 0.33
SLC48A1-203ENST00000461620 HERC2P3Q9BVR0 1158 aa17.12■□□□□ 0.33
SLC48A1-203ENST00000461620 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.12■□□□□ 0.33
SLC48A1-203ENST00000461620 MARCH5Q9NX47 278 aa17.12■□□□□ 0.33
SLC48A1-203ENST00000461620 TUBGCP4Q9UGJ1 667 aa17.12■□□□□ 0.33
SLC48A1-203ENST00000461620 ARMCX3Q9UH62 379 aaPredicted RBP17.12■□□□□ 0.33
SLC48A1-203ENST00000461620 TRIM49BA6NDI0 452 aa17.11■□□□□ 0.33
SLC48A1-203ENST00000461620 SYN3O14994 580 aa17.11■□□□□ 0.33
SLC48A1-203ENST00000461620 KIF4AO95239 1232 aa17.11■□□□□ 0.33
SLC48A1-203ENST00000461620 CAVIN2O95810 425 aa17.11■□□□□ 0.33
SLC48A1-203ENST00000461620 C1RP00736 705 aa17.11■□□□□ 0.33
SLC48A1-203ENST00000461620 CTSAP10619 480 aa17.11■□□□□ 0.33
SLC48A1-203ENST00000461620 ATICP31939 592 aa17.11■□□□□ 0.33
SLC48A1-203ENST00000461620 MARSP56192 900 aaKnown RBP17.11■□□□□ 0.33
SLC48A1-203ENST00000461620 SPAG1Q07617 926 aa17.11■□□□□ 0.33
SLC48A1-203ENST00000461620 SMC1AQ14683 1233 aaKnown RBP17.11■□□□□ 0.33
SLC48A1-203ENST00000461620 NFKBIBQ15653 356 aa17.11■□□□□ 0.33
SLC48A1-203ENST00000461620 C9orf57Q5W0N0 161 aa17.11■□□□□ 0.33
SLC48A1-203ENST00000461620 KIAA1841Q6NSI8 718 aa17.11■□□□□ 0.33
SLC48A1-203ENST00000461620 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.11■□□□□ 0.33
SLC48A1-203ENST00000461620 TMC7Q7Z402 723 aa17.11■□□□□ 0.33
SLC48A1-203ENST00000461620 SPRED2Q7Z698 418 aa17.11■□□□□ 0.33
SLC48A1-203ENST00000461620 FAM114A1Q8IWE2 563 aa17.11■□□□□ 0.33
SLC48A1-203ENST00000461620 VPS52Q8N1B4 723 aa17.11■□□□□ 0.33
SLC48A1-203ENST00000461620 MICAL1Q8TDZ2 1067 aa17.11■□□□□ 0.33
SLC48A1-203ENST00000461620 OXCT2Q9BYC2 517 aaPredicted RBP17.11■□□□□ 0.33
SLC48A1-203ENST00000461620 GOLGA2P5Q9HBQ8 144 aa17.11■□□□□ 0.33
SLC48A1-203ENST00000461620 MRPL17Q9NRX2 175 aaKnown RBP17.11■□□□□ 0.33
SLC48A1-203ENST00000461620 EPOPA6NHQ4 379 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms