RNA–Protein interactions for RNA: ENST00000461437.5

NUP50-213, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-213ENST00000461437 HDAC7Q8WUI4 952 aa16.93■□□□□ 0.3
NUP50-213ENST00000461437 UROC1Q96N76 676 aa16.93■□□□□ 0.3
NUP50-213ENST00000461437 CCSER1Q9C0I3 900 aa16.93■□□□□ 0.3
NUP50-213ENST00000461437 KCNK12Q9HB15 430 aa16.93■□□□□ 0.3
NUP50-213ENST00000461437 PARVGQ9HBI0 331 aa16.93■□□□□ 0.3
NUP50-213ENST00000461437 HCFC1R1Q9NWW0 138 aa16.93■□□□□ 0.3
NUP50-213ENST00000461437 ZDHHC7Q9NXF8 308 aa16.93■□□□□ 0.3
NUP50-213ENST00000461437 COL4A3Q01955 1670 aa16.93■□□□□ 0.3
NUP50-213ENST00000461437 TSC2P49815 1807 aa16.92■□□□□ 0.3
NUP50-213ENST00000461437 A0A087X0B3 334 aa16.92■□□□□ 0.3
NUP50-213ENST00000461437 ANKRD63C9JTQ0 380 aa16.92■□□□□ 0.3
NUP50-213ENST00000461437 HNRNPDLO14979 420 aaKnown RBP16.92■□□□□ 0.3
NUP50-213ENST00000461437 SLC26A4O43511 780 aa16.92■□□□□ 0.3
NUP50-213ENST00000461437 TBCAO75347 108 aaKnown RBP16.92■□□□□ 0.3
NUP50-213ENST00000461437 FOXD4L6Q3SYB3 417 aaPredicted RBP16.92■□□□□ 0.3
NUP50-213ENST00000461437 PPM1LQ5SGD2 360 aa16.92■□□□□ 0.3
NUP50-213ENST00000461437 VARS2Q5ST30 1063 aaKnown RBP16.92■□□□□ 0.3
NUP50-213ENST00000461437 LIN9Q5TKA1 542 aa16.92■□□□□ 0.3
NUP50-213ENST00000461437 ELMSAN1Q6PJG2 1045 aa16.92■□□□□ 0.3
NUP50-213ENST00000461437 FOXD4L3Q6VB84 417 aaPredicted RBP16.92■□□□□ 0.3
NUP50-213ENST00000461437 SFR1Q86XK3 245 aa16.92■□□□□ 0.3
NUP50-213ENST00000461437 FAM212AQ96EL1 285 aa16.92■□□□□ 0.3
NUP50-213ENST00000461437 KIF12Q96FN5 646 aa16.92■□□□□ 0.3
NUP50-213ENST00000461437 PHOX2BQ99453 314 aa16.92■□□□□ 0.3
NUP50-213ENST00000461437 SLC38A7Q9NVC3 462 aa16.92■□□□□ 0.3
NUP50-213ENST00000461437 TBC1D7Q9P0N9 293 aa16.92■□□□□ 0.3
NUP50-213ENST00000461437 DPP7Q9UHL4 492 aa16.92■□□□□ 0.3
NUP50-213ENST00000461437 NUB1Q9Y5A7 615 aa16.92■□□□□ 0.3
NUP50-213ENST00000461437 SRPRBQ9Y5M8 271 aaKnown RBP16.92■□□□□ 0.3
NUP50-213ENST00000461437 MYMKA6NI61 221 aa16.91■□□□□ 0.3
NUP50-213ENST00000461437 LACTBL1A8MY62 500 aa16.91■□□□□ 0.3
NUP50-213ENST00000461437 PPEF2O14830 753 aa16.91■□□□□ 0.3
NUP50-213ENST00000461437 STX6O43752 255 aa16.91■□□□□ 0.3
NUP50-213ENST00000461437 FAM189A1O60320 539 aa16.91■□□□□ 0.3
NUP50-213ENST00000461437 MCM4P33991 863 aa16.91■□□□□ 0.3
NUP50-213ENST00000461437 DDIT3P35638 169 aa16.91■□□□□ 0.3
NUP50-213ENST00000461437 NHLH1Q02575 133 aa16.91■□□□□ 0.3
NUP50-213ENST00000461437 RAB33AQ14088 237 aa16.91■□□□□ 0.3
NUP50-213ENST00000461437 AXDND1Q5T1B0 1012 aaPredicted RBP16.91■□□□□ 0.3
NUP50-213ENST00000461437 UBALD2Q8IYN6 164 aa16.91■□□□□ 0.3
NUP50-213ENST00000461437 SPRYD3Q8NCJ5 442 aa16.91■□□□□ 0.3
NUP50-213ENST00000461437 INTS4Q96HW7 963 aaKnown RBP16.91■□□□□ 0.3
NUP50-213ENST00000461437 TIMM13Q9Y5L4 95 aaPredicted RBP16.91■□□□□ 0.3
NUP50-213ENST00000461437 TTC26A0AVF1 554 aa16.9■□□□□ 0.3
NUP50-213ENST00000461437 WDR27A2RRH5 827 aa16.9■□□□□ 0.3
NUP50-213ENST00000461437 CFHP08603 1231 aa16.9■□□□□ 0.3
NUP50-213ENST00000461437 CLTAP09496 248 aa16.9■□□□□ 0.3
NUP50-213ENST00000461437 AVPR2P30518 371 aa16.9■□□□□ 0.3
NUP50-213ENST00000461437 ROR1Q01973 937 aa16.9■□□□□ 0.3
NUP50-213ENST00000461437 TDGQ13569 410 aa16.9■□□□□ 0.3
NUP50-213ENST00000461437 ENOX2Q16206 610 aaKnown RBP16.9■□□□□ 0.3
NUP50-213ENST00000461437 RRAGBQ5VZM2 374 aa16.9■□□□□ 0.3
NUP50-213ENST00000461437 PDILTQ8N807 584 aa16.9■□□□□ 0.3
NUP50-213ENST00000461437 ITFG1Q8TB96 612 aa16.9■□□□□ 0.3
NUP50-213ENST00000461437 RPP25Q9BUL9 199 aaKnown RBP16.9■□□□□ 0.3
NUP50-213ENST00000461437 TFIP11Q9UBB9 837 aaKnown RBP16.9■□□□□ 0.3
NUP50-213ENST00000461437 H0YCG3 227 aa16.89■□□□□ 0.29
NUP50-213ENST00000461437 TRAPPC3O43617 180 aa16.89■□□□□ 0.29
NUP50-213ENST00000461437 PAPLNO95428 1278 aa16.89■□□□□ 0.29
NUP50-213ENST00000461437 PIGRP01833 764 aa16.89■□□□□ 0.29
NUP50-213ENST00000461437 FSHRP23945 695 aa16.89■□□□□ 0.29
NUP50-213ENST00000461437 ACOT2P49753 483 aa16.89■□□□□ 0.29
NUP50-213ENST00000461437 CDR1P51861 262 aa16.89■□□□□ 0.29
NUP50-213ENST00000461437 PPP2R3AQ06190 1150 aa16.89■□□□□ 0.29
NUP50-213ENST00000461437 KCNA1Q09470 495 aa16.89■□□□□ 0.29
NUP50-213ENST00000461437 TCF15Q12870 199 aa16.89■□□□□ 0.29
NUP50-213ENST00000461437 PDXDC1Q6P996 788 aa16.89■□□□□ 0.29
NUP50-213ENST00000461437 ANKS3Q6ZW76 656 aa16.89■□□□□ 0.29
NUP50-213ENST00000461437 TMEM105Q8N8V8 129 aa16.89■□□□□ 0.29
NUP50-213ENST00000461437 FLCNQ8NFG4 579 aa16.89■□□□□ 0.29
NUP50-213ENST00000461437 ING5Q8WYH8 240 aa16.89■□□□□ 0.29
NUP50-213ENST00000461437 DDX12PQ92771 950 aa16.89■□□□□ 0.29
NUP50-213ENST00000461437 STAMQ92783 540 aa16.89■□□□□ 0.29
NUP50-213ENST00000461437 MSTO1Q9BUK6 570 aa16.89■□□□□ 0.29
NUP50-213ENST00000461437 FGFBP2Q9BYJ0 223 aa16.89■□□□□ 0.29
NUP50-213ENST00000461437 RHOBTB2Q9BYZ6 727 aa16.89■□□□□ 0.29
NUP50-213ENST00000461437 FAM86C1Q9NVL1 165 aa16.89■□□□□ 0.29
NUP50-213ENST00000461437 DNMT3BQ9UBC3 853 aaKnown RBP16.89■□□□□ 0.29
NUP50-213ENST00000461437 CCDC39Q9UFE4 941 aa16.89■□□□□ 0.29
NUP50-213ENST00000461437 KCNG1Q9UIX4 513 aa16.89■□□□□ 0.29
NUP50-213ENST00000461437 FBXL5Q9UKA1 691 aa16.89■□□□□ 0.29
NUP50-213ENST00000461437 BACE2Q9Y5Z0 518 aa16.89■□□□□ 0.29
NUP50-213ENST00000461437 TULP1O00294 542 aaPredicted RBP16.88■□□□□ 0.29
NUP50-213ENST00000461437 OGTO15294 1046 aa16.88■□□□□ 0.29
NUP50-213ENST00000461437 SEC24AO95486 1093 aa16.88■□□□□ 0.29
NUP50-213ENST00000461437 NFICP08651 508 aa16.88■□□□□ 0.29
NUP50-213ENST00000461437 LAMP2P13473 410 aa16.88■□□□□ 0.29
NUP50-213ENST00000461437 RPL9P32969 192 aaKnown RBP16.88■□□□□ 0.29
NUP50-213ENST00000461437 MRE11P49959 708 aa16.88■□□□□ 0.29
NUP50-213ENST00000461437 GTF2BQ00403 316 aa16.88■□□□□ 0.29
NUP50-213ENST00000461437 SLC39A14Q15043 492 aa16.88■□□□□ 0.29
NUP50-213ENST00000461437 CWF19L1Q69YN2 538 aaKnown RBP16.88■□□□□ 0.29
NUP50-213ENST00000461437 JADE1Q6IE81 842 aa16.88■□□□□ 0.29
NUP50-213ENST00000461437 CYP26C1Q6V0L0 522 aa16.88■□□□□ 0.29
NUP50-213ENST00000461437 MAP4K3Q8IVH8 894 aa16.88■□□□□ 0.29
NUP50-213ENST00000461437 KRI1Q8N9T8 703 aaKnown RBP16.88■□□□□ 0.29
NUP50-213ENST00000461437 ZSWIM2Q8NEG5 633 aa16.88■□□□□ 0.29
NUP50-213ENST00000461437 DNAJC19Q96DA6 116 aa16.88■□□□□ 0.29
NUP50-213ENST00000461437 SUSD3Q96L08 255 aa16.88■□□□□ 0.29
NUP50-213ENST00000461437 RPF1Q9H9Y2 349 aaKnown RBP16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms