RNA–Protein interactions for RNA: ENST00000461328.1

VARS-219, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-219ENST00000461328 RESP18Q5W5W9 173 aa16.76■□□□□ 0.27
VARS-219ENST00000461328 ZNF720Q7Z2F6 126 aa16.76■□□□□ 0.27
VARS-219ENST00000461328 SYCP3Q8IZU3 236 aa16.76■□□□□ 0.27
VARS-219ENST00000461328 LNX1Q8TBB1 728 aaPredicted RBP16.76■□□□□ 0.27
VARS-219ENST00000461328 FAM212AQ96EL1 285 aa16.76■□□□□ 0.27
VARS-219ENST00000461328 CHAMP1Q96JM3 812 aa16.76■□□□□ 0.27
VARS-219ENST00000461328 PYM1Q9BRP8 204 aaKnown RBP16.76■□□□□ 0.27
VARS-219ENST00000461328 HAPLN2Q9GZV7 340 aa16.76■□□□□ 0.27
VARS-219ENST00000461328 PLEKHA4Q9H4M7 779 aa16.76■□□□□ 0.27
VARS-219ENST00000461328 RPF1Q9H9Y2 349 aaKnown RBP16.76■□□□□ 0.27
VARS-219ENST00000461328 TULP1O00294 542 aaPredicted RBP16.75■□□□□ 0.27
VARS-219ENST00000461328 PODXLO00592 558 aa16.75■□□□□ 0.27
VARS-219ENST00000461328 RFPL2O75678 378 aa16.75■□□□□ 0.27
VARS-219ENST00000461328 TNFSF9P41273 254 aa16.75■□□□□ 0.27
VARS-219ENST00000461328 ALCAMQ13740 583 aa16.75■□□□□ 0.27
VARS-219ENST00000461328 SLC10A6Q3KNW5 377 aa16.75■□□□□ 0.27
VARS-219ENST00000461328 L1TD1Q5T7N2 865 aaKnown RBP16.75■□□□□ 0.27
VARS-219ENST00000461328 ADALQ6DHV7 355 aa16.75■□□□□ 0.27
VARS-219ENST00000461328 SLFN12LQ6IEE8 588 aa16.75■□□□□ 0.27
VARS-219ENST00000461328 SLC39A4Q6P5W5 647 aa16.75■□□□□ 0.27
VARS-219ENST00000461328 CYP26C1Q6V0L0 522 aa16.75■□□□□ 0.27
VARS-219ENST00000461328 TRIM67Q6ZTA4 783 aa16.75■□□□□ 0.27
VARS-219ENST00000461328 OTOP3Q7RTS5 596 aa16.75■□□□□ 0.27
VARS-219ENST00000461328 CEP57L1Q8IYX8 460 aa16.75■□□□□ 0.27
VARS-219ENST00000461328 PLCD3Q8N3E9 789 aa16.75■□□□□ 0.27
VARS-219ENST00000461328 KREMEN2Q8NCW0 462 aa16.75■□□□□ 0.27
VARS-219ENST00000461328 C3orf58Q8NDZ4 430 aa16.75■□□□□ 0.27
VARS-219ENST00000461328 LEO1Q8WVC0 666 aaPredicted RBP16.75■□□□□ 0.27
VARS-219ENST00000461328 C18orf25Q96B23 403 aaPredicted RBP16.75■□□□□ 0.27
VARS-219ENST00000461328 KIF12Q96FN5 646 aa16.75■□□□□ 0.27
VARS-219ENST00000461328 ACCSQ96QU6 501 aa16.75■□□□□ 0.27
VARS-219ENST00000461328 TRIM9Q9C026 710 aa16.75■□□□□ 0.27
VARS-219ENST00000461328 PIDD1Q9HB75 910 aa16.75■□□□□ 0.27
VARS-219ENST00000461328 OLFML3Q9NRN5 406 aa16.75■□□□□ 0.27
VARS-219ENST00000461328 KBTBD4Q9NVX7 518 aa16.75■□□□□ 0.27
VARS-219ENST00000461328 USTQ9Y2C2 406 aa16.75■□□□□ 0.27
VARS-219ENST00000461328 PCDHB13Q9Y5F0 798 aa16.75■□□□□ 0.27
VARS-219ENST00000461328 A0A0B4J269 797 aa16.74■□□□□ 0.27
VARS-219ENST00000461328 FRMD3A2A2Y4 597 aa16.74■□□□□ 0.27
VARS-219ENST00000461328 TMEM221A6NGB7 291 aa16.74■□□□□ 0.27
VARS-219ENST00000461328 TISP43B9A030 160 aa16.74■□□□□ 0.27
VARS-219ENST00000461328 I3L4J1 428 aa16.74■□□□□ 0.27
VARS-219ENST00000461328 M0R296 226 aa16.74■□□□□ 0.27
VARS-219ENST00000461328 FGFR3P22607 806 aa16.74■□□□□ 0.27
VARS-219ENST00000461328 IGFBP6P24592 240 aaPredicted RBP16.74■□□□□ 0.27
VARS-219ENST00000461328 BRCC3P46736 316 aa16.74■□□□□ 0.27
VARS-219ENST00000461328 SPAG1Q07617 926 aa16.74■□□□□ 0.27
VARS-219ENST00000461328 ZBTB41Q5SVQ8 909 aa16.74■□□□□ 0.27
VARS-219ENST00000461328 LIN9Q5TKA1 542 aa16.74■□□□□ 0.27
VARS-219ENST00000461328 LILRA6Q6PI73 481 aa16.74■□□□□ 0.27
VARS-219ENST00000461328 STXBP4Q6ZWJ1 553 aa16.74■□□□□ 0.27
VARS-219ENST00000461328 ZDHHC14Q8IZN3 488 aa16.74■□□□□ 0.27
VARS-219ENST00000461328 POMGNT1Q8WZA1 660 aa16.74■□□□□ 0.27
VARS-219ENST00000461328 SMG7Q92540 1137 aaKnown RBP16.74■□□□□ 0.27
VARS-219ENST00000461328 ACSF2Q96CM8 615 aaPredicted RBP16.74■□□□□ 0.27
VARS-219ENST00000461328 CLSTN3Q9BQT9 956 aa16.74■□□□□ 0.27
VARS-219ENST00000461328 PLEKHA5Q9HAU0 1116 aa16.74■□□□□ 0.27
VARS-219ENST00000461328 ZDHHC7Q9NXF8 308 aa16.74■□□□□ 0.27
VARS-219ENST00000461328 KCNH3Q9ULD8 1083 aa16.74■□□□□ 0.27
VARS-219ENST00000461328 NUB1Q9Y5A7 615 aa16.74■□□□□ 0.27
VARS-219ENST00000461328 TRIP11Q15643 1979 aa16.73■□□□□ 0.27
VARS-219ENST00000461328 ANKRD63C9JTQ0 380 aa16.73■□□□□ 0.27
VARS-219ENST00000461328 MEFVO15553 781 aaPredicted RBP16.73■□□□□ 0.27
VARS-219ENST00000461328 XPOTO43592 962 aaKnown RBP16.73■□□□□ 0.27
VARS-219ENST00000461328 PPP1R37O75864 691 aa16.73■□□□□ 0.27
VARS-219ENST00000461328 TKTP29401 623 aaKnown RBP16.73■□□□□ 0.27
VARS-219ENST00000461328 RPL9P32969 192 aaKnown RBP16.73■□□□□ 0.27
VARS-219ENST00000461328 AFMP43652 599 aa16.73■□□□□ 0.27
VARS-219ENST00000461328 CASP5P51878 434 aa16.73■□□□□ 0.27
VARS-219ENST00000461328 CD300LGQ6UXG3 332 aa16.73■□□□□ 0.27
VARS-219ENST00000461328 HFE2Q6ZVN8 426 aa16.73■□□□□ 0.27
VARS-219ENST00000461328 NOC3LQ8WTT2 800 aaKnown RBP16.73■□□□□ 0.27
VARS-219ENST00000461328 RHOBTB2Q9BYZ6 727 aa16.73■□□□□ 0.27
VARS-219ENST00000461328 SCAND2PQ9GZW5 306 aaPredicted RBP16.73■□□□□ 0.27
VARS-219ENST00000461328 MTRRQ9UBK8 725 aa16.73■□□□□ 0.27
VARS-219ENST00000461328 TUBGCP4Q9UGJ1 667 aa16.73■□□□□ 0.27
VARS-219ENST00000461328 LIMD1Q9UGP4 676 aa16.73■□□□□ 0.27
VARS-219ENST00000461328 AGO2Q9UKV8 859 aaKnown RBP16.73■□□□□ 0.27
VARS-219ENST00000461328 CITO14578 2027 aa16.72■□□□□ 0.27
VARS-219ENST00000461328 DENND4AQ7Z401 1863 aa16.72■□□□□ 0.27
VARS-219ENST00000461328 LACTBL1A8MY62 500 aa16.72■□□□□ 0.27
VARS-219ENST00000461328 ADAM12O43184 909 aa16.72■□□□□ 0.27
VARS-219ENST00000461328 ZMYND10O75800 440 aa16.72■□□□□ 0.27
VARS-219ENST00000461328 PFKFB1P16118 471 aa16.72■□□□□ 0.27
VARS-219ENST00000461328 MCM4P33991 863 aa16.72■□□□□ 0.27
VARS-219ENST00000461328 OR1D2P34982 312 aa16.72■□□□□ 0.27
VARS-219ENST00000461328 ACOT2P49753 483 aa16.72■□□□□ 0.27
VARS-219ENST00000461328 SIGLEC14Q08ET2 396 aa16.72■□□□□ 0.27
VARS-219ENST00000461328 KCNA1Q09470 495 aa16.72■□□□□ 0.27
VARS-219ENST00000461328 MTMR3Q13615 1198 aa16.72■□□□□ 0.27
VARS-219ENST00000461328 POSTNQ15063 836 aa16.72■□□□□ 0.27
VARS-219ENST00000461328 ENOX2Q16206 610 aaKnown RBP16.72■□□□□ 0.27
VARS-219ENST00000461328 ANKS3Q6ZW76 656 aa16.72■□□□□ 0.27
VARS-219ENST00000461328 ZNF707Q96C28 371 aaPredicted RBP16.72■□□□□ 0.27
VARS-219ENST00000461328 MFSD14AQ96MC6 490 aa16.72■□□□□ 0.27
VARS-219ENST00000461328 FGFBP2Q9BYJ0 223 aa16.72■□□□□ 0.27
VARS-219ENST00000461328 PRKD2Q9BZL6 878 aa16.72■□□□□ 0.27
VARS-219ENST00000461328 BLZF1Q9H2G9 400 aa16.72■□□□□ 0.27
VARS-219ENST00000461328 IKZF4Q9H2S9 585 aa16.72■□□□□ 0.27
VARS-219ENST00000461328 WDR6Q9NNW5 1121 aaKnown RBP16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms