RNA–Protein interactions for RNA: ENST00000461127.5

TOP3A-202, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-202ENST00000461127 AGXT2Q9BYV1 514 aa18.99■□□□□ 0.63
TOP3A-202ENST00000461127 POLR3FQ9H1D9 316 aaPredicted RBP18.99■□□□□ 0.63
TOP3A-202ENST00000461127 WDR27A2RRH5 827 aa18.98■□□□□ 0.63
TOP3A-202ENST00000461127 SLITRK3O94933 977 aa18.98■□□□□ 0.63
TOP3A-202ENST00000461127 PROS1P07225 676 aa18.98■□□□□ 0.63
TOP3A-202ENST00000461127 RPS6KB1P23443 525 aa18.98■□□□□ 0.63
TOP3A-202ENST00000461127 TKTP29401 623 aaKnown RBP18.98■□□□□ 0.63
TOP3A-202ENST00000461127 ROR1Q01973 937 aa18.98■□□□□ 0.63
TOP3A-202ENST00000461127 PTGDRQ13258 359 aa18.98■□□□□ 0.63
TOP3A-202ENST00000461127 NAB2Q15742 525 aa18.98■□□□□ 0.63
TOP3A-202ENST00000461127 IQCEQ6IPM2 695 aa18.98■□□□□ 0.63
TOP3A-202ENST00000461127 POTEHQ6S545 545 aa18.98■□□□□ 0.63
TOP3A-202ENST00000461127 TCEAL4Q96EI5 215 aa18.98■□□□□ 0.63
TOP3A-202ENST00000461127 DDX27Q96GQ7 796 aaKnown RBP18.98■□□□□ 0.63
TOP3A-202ENST00000461127 UROC1Q96N76 676 aa18.98■□□□□ 0.63
TOP3A-202ENST00000461127 SDK1Q7Z5N4 2213 aa18.98■□□□□ 0.63
TOP3A-202ENST00000461127 LYPLA2O95372 231 aa18.97■□□□□ 0.63
TOP3A-202ENST00000461127 GAS6Q14393 721 aa18.97■□□□□ 0.63
TOP3A-202ENST00000461127 NPY5RQ15761 445 aa18.97■□□□□ 0.63
TOP3A-202ENST00000461127 FAM187BQ17R55 369 aa18.97■□□□□ 0.63
TOP3A-202ENST00000461127 CPLX2Q6PUV4 134 aaKnown RBP18.97■□□□□ 0.63
TOP3A-202ENST00000461127 E2F7Q96AV8 911 aa18.97■□□□□ 0.63
TOP3A-202ENST00000461127 EIF2AK1Q9BQI3 630 aaKnown RBP18.97■□□□□ 0.63
TOP3A-202ENST00000461127 PDZD7Q9H5P4 517 aa18.97■□□□□ 0.63
TOP3A-202ENST00000461127 C8orf33Q9H7E9 229 aaPredicted RBP18.97■□□□□ 0.63
TOP3A-202ENST00000461127 CYP4F11Q9HBI6 524 aa18.97■□□□□ 0.63
TOP3A-202ENST00000461127 GREB1Q4ZG55 1949 aa18.97■□□□□ 0.63
TOP3A-202ENST00000461127 COL4A2P08572 1712 aa18.97■□□□□ 0.63
TOP3A-202ENST00000461127 ABLIM3O94929 683 aa18.96■□□□□ 0.63
TOP3A-202ENST00000461127 ZNF806P0C7X5 589 aa18.96■□□□□ 0.63
TOP3A-202ENST00000461127 ATF2P15336 505 aa18.96■□□□□ 0.63
TOP3A-202ENST00000461127 CLCNKBP51801 687 aa18.96■□□□□ 0.63
TOP3A-202ENST00000461127 KPNA1P52294 538 aaPredicted RBP18.96■□□□□ 0.63
TOP3A-202ENST00000461127 EVCP57679 992 aa18.96■□□□□ 0.63
TOP3A-202ENST00000461127 PRPF4BQ13523 1007 aaKnown RBP18.96■□□□□ 0.63
TOP3A-202ENST00000461127 DGKKQ5KSL6 1271 aa18.96■□□□□ 0.63
TOP3A-202ENST00000461127 SLC8B1Q6J4K2 584 aa18.96■□□□□ 0.63
TOP3A-202ENST00000461127 POTEDQ86YR6 584 aa18.96■□□□□ 0.63
TOP3A-202ENST00000461127 NOSTRINQ8IVI9 506 aa18.96■□□□□ 0.63
TOP3A-202ENST00000461127 MFSD6LQ8IWD5 586 aa18.96■□□□□ 0.63
TOP3A-202ENST00000461127 YAF2Q8IY57 180 aa18.96■□□□□ 0.63
TOP3A-202ENST00000461127 TCEAL8Q8IYN2 117 aa18.96■□□□□ 0.63
TOP3A-202ENST00000461127 LEMD2Q8NC56 503 aa18.96■□□□□ 0.63
TOP3A-202ENST00000461127 FAM200AQ8TCP9 573 aa18.96■□□□□ 0.63
TOP3A-202ENST00000461127 LOXL4Q96JB6 756 aa18.96■□□□□ 0.63
TOP3A-202ENST00000461127 ZNF512Q96ME7 567 aaPredicted RBP18.96■□□□□ 0.63
TOP3A-202ENST00000461127 C2orf40Q9H1Z8 148 aa18.96■□□□□ 0.63
TOP3A-202ENST00000461127 FZD8Q9H461 694 aa18.96■□□□□ 0.63
TOP3A-202ENST00000461127 DAXXQ9UER7 740 aaPredicted RBP18.96■□□□□ 0.63
TOP3A-202ENST00000461127 GDAQ9Y2T3 454 aa18.96■□□□□ 0.63
TOP3A-202ENST00000461127 K7ESF4 209 aa18.95■□□□□ 0.62
TOP3A-202ENST00000461127 TM4SF5O14894 197 aa18.95■□□□□ 0.62
TOP3A-202ENST00000461127 AXIN1O15169 862 aa18.95■□□□□ 0.62
TOP3A-202ENST00000461127 USO1O60763 962 aaKnown RBP18.95■□□□□ 0.62
TOP3A-202ENST00000461127 PSMA5P28066 241 aa18.95■□□□□ 0.62
TOP3A-202ENST00000461127 VIPR2P41587 438 aa18.95■□□□□ 0.62
TOP3A-202ENST00000461127 RARRES1P49788 294 aa18.95■□□□□ 0.62
TOP3A-202ENST00000461127 ARPP19P56211 112 aa18.95■□□□□ 0.62
TOP3A-202ENST00000461127 SF3A2Q15428 464 aaKnown RBP18.95■□□□□ 0.62
TOP3A-202ENST00000461127 MAPK6Q16659 721 aa18.95■□□□□ 0.62
TOP3A-202ENST00000461127 WDR5BQ86VZ2 330 aa18.95■□□□□ 0.62
TOP3A-202ENST00000461127 ARRDC1-AS1Q9H2J1 176 aa18.95■□□□□ 0.62
TOP3A-202ENST00000461127 SLITRK6Q9H5Y7 841 aa18.95■□□□□ 0.62
TOP3A-202ENST00000461127 TRPV4Q9HBA0 871 aa18.95■□□□□ 0.62
TOP3A-202ENST00000461127 INSL5Q9Y5Q6 135 aa18.95■□□□□ 0.62
TOP3A-202ENST00000461127 FRYQ5TBA9 3013 aa18.95■□□□□ 0.62
TOP3A-202ENST00000461127 SPAG17Q6Q759 2223 aa18.94■□□□□ 0.62
TOP3A-202ENST00000461127 H7C4K7 107 aa18.94■□□□□ 0.62
TOP3A-202ENST00000461127 I3L4J1 428 aa18.94■□□□□ 0.62
TOP3A-202ENST00000461127 XBP1P17861 261 aa18.94■□□□□ 0.62
TOP3A-202ENST00000461127 HOXA6P31267 233 aa18.94■□□□□ 0.62
TOP3A-202ENST00000461127 CCR2P41597 374 aa18.94■□□□□ 0.62
TOP3A-202ENST00000461127 UPP1Q16831 310 aa18.94■□□□□ 0.62
TOP3A-202ENST00000461127 DCAF4L1Q3SXM0 396 aa18.94■□□□□ 0.62
TOP3A-202ENST00000461127 GLRA4Q5JXX5 417 aa18.94■□□□□ 0.62
TOP3A-202ENST00000461127 STPG1Q5TH74 334 aa18.94■□□□□ 0.62
TOP3A-202ENST00000461127 TPGS2Q68CL5 300 aa18.94■□□□□ 0.62
TOP3A-202ENST00000461127 CDCA2Q69YH5 1023 aaPredicted RBP18.94■□□□□ 0.62
TOP3A-202ENST00000461127 PIK3AP1Q6ZUJ8 805 aa18.94■□□□□ 0.62
TOP3A-202ENST00000461127 MAEAQ7L5Y9 396 aa18.94■□□□□ 0.62
TOP3A-202ENST00000461127 MCPH1Q8NEM0 835 aa18.94■□□□□ 0.62
TOP3A-202ENST00000461127 ZSCAN18Q8TBC5 510 aaPredicted RBP18.94■□□□□ 0.62
TOP3A-202ENST00000461127 KCNB2Q92953 911 aa18.94■□□□□ 0.62
TOP3A-202ENST00000461127 ZSWIM3Q96MP5 696 aa18.94■□□□□ 0.62
TOP3A-202ENST00000461127 HSD17B14Q9BPX1 270 aa18.94■□□□□ 0.62
TOP3A-202ENST00000461127 GPR88Q9GZN0 384 aa18.94■□□□□ 0.62
TOP3A-202ENST00000461127 CXCL16Q9H2A7 254 aa18.94■□□□□ 0.62
TOP3A-202ENST00000461127 ASAH2Q9NR71 780 aa18.94■□□□□ 0.62
TOP3A-202ENST00000461127 RBM12Q9NTZ6 932 aaKnown RBP18.94■□□□□ 0.62
TOP3A-202ENST00000461127 PCDHA12Q9UN75 941 aa18.94■□□□□ 0.62
TOP3A-202ENST00000461127 KCNJ14Q9UNX9 436 aa18.94■□□□□ 0.62
TOP3A-202ENST00000461127 SNX14Q9Y5W7 946 aa18.94■□□□□ 0.62
TOP3A-202ENST00000461127 PDCD11Q14690 1871 aaKnown RBP18.93■□□□□ 0.62
TOP3A-202ENST00000461127 HEPACAM2A8MVW5 462 aa18.93■□□□□ 0.62
TOP3A-202ENST00000461127 MYL4P12829 197 aa18.93■□□□□ 0.62
TOP3A-202ENST00000461127 BRCC3P46736 316 aa18.93■□□□□ 0.62
TOP3A-202ENST00000461127 ACAP1Q15027 740 aa18.93■□□□□ 0.62
TOP3A-202ENST00000461127 APBB1IPQ7Z5R6 666 aaPredicted RBP18.93■□□□□ 0.62
TOP3A-202ENST00000461127 PIGOQ8TEQ8 1089 aa18.93■□□□□ 0.62
TOP3A-202ENST00000461127 AIFM3Q96NN9 605 aa18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms