RNA–Protein interactions for RNA: ENST00000459895.1

COL18A1-206, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 3

Gene COL18A1, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-206ENST00000459895 TMEM189-UBE2V1I3L0A0 370 aa13.9□□□□□ -0.18
COL18A1-206ENST00000459895 I3L4J1 428 aa13.9□□□□□ -0.18
COL18A1-206ENST00000459895 TULP1O00294 542 aaPredicted RBP13.9□□□□□ -0.18
COL18A1-206ENST00000459895 FSCN2O14926 492 aa13.9□□□□□ -0.18
COL18A1-206ENST00000459895 AKAP3O75969 853 aa13.9□□□□□ -0.18
COL18A1-206ENST00000459895 LRPAP1P30533 357 aa13.9□□□□□ -0.18
COL18A1-206ENST00000459895 POU5F1Q01860 360 aaKnown RBP13.9□□□□□ -0.18
COL18A1-206ENST00000459895 UBE3AQ05086 875 aa13.9□□□□□ -0.18
COL18A1-206ENST00000459895 LRRC63Q05C16 580 aa13.9□□□□□ -0.18
COL18A1-206ENST00000459895 PAK1Q13153 545 aa13.9□□□□□ -0.18
COL18A1-206ENST00000459895 STIM1Q13586 685 aa13.9□□□□□ -0.18
COL18A1-206ENST00000459895 PSMD6Q15008 389 aa13.9□□□□□ -0.18
COL18A1-206ENST00000459895 TIGD5Q53EQ6 642 aa13.9□□□□□ -0.18
COL18A1-206ENST00000459895 SPATA1Q5VX52 437 aa13.9□□□□□ -0.18
COL18A1-206ENST00000459895 CEP135Q66GS9 1140 aa13.9□□□□□ -0.18
COL18A1-206ENST00000459895 CENPPQ6IPU0 288 aa13.9□□□□□ -0.18
COL18A1-206ENST00000459895 CAVIN1Q6NZI2 390 aaKnown RBP13.9□□□□□ -0.18
COL18A1-206ENST00000459895 CD300LGQ6UXG3 332 aa13.9□□□□□ -0.18
COL18A1-206ENST00000459895 ADGRD2Q7Z7M1 963 aa13.9□□□□□ -0.18
COL18A1-206ENST00000459895 BEST2Q8NFU1 509 aa13.9□□□□□ -0.18
COL18A1-206ENST00000459895 NELFBQ8WX92 580 aa13.9□□□□□ -0.18
COL18A1-206ENST00000459895 AUTS2Q8WXX7 1259 aa13.9□□□□□ -0.18
COL18A1-206ENST00000459895 EEF2KMTQ96G04 330 aa13.9□□□□□ -0.18
COL18A1-206ENST00000459895 B3GALT6Q96L58 329 aa13.9□□□□□ -0.18
COL18A1-206ENST00000459895 CGRRF1Q99675 332 aa13.9□□□□□ -0.18
COL18A1-206ENST00000459895 TSG101Q99816 390 aa13.9□□□□□ -0.18
COL18A1-206ENST00000459895 TCF25Q9BQ70 676 aa13.9□□□□□ -0.18
COL18A1-206ENST00000459895 KIAA1586Q9HCI6 787 aa13.9□□□□□ -0.18
COL18A1-206ENST00000459895 ENTPD7Q9NQZ7 604 aa13.9□□□□□ -0.18
COL18A1-206ENST00000459895 LZTS1Q9Y250 596 aa13.9□□□□□ -0.18
COL18A1-206ENST00000459895 ZNF233A6NK53 670 aa13.89□□□□□ -0.19
COL18A1-206ENST00000459895 LRRIQ3A6PVS8 624 aaPredicted RBP13.89□□□□□ -0.19
COL18A1-206ENST00000459895 XPOTO43592 962 aaKnown RBP13.89□□□□□ -0.19
COL18A1-206ENST00000459895 DLATP10515 647 aaKnown RBP13.89□□□□□ -0.19
COL18A1-206ENST00000459895 CYP3A5P20815 502 aa13.89□□□□□ -0.19
COL18A1-206ENST00000459895 CCNE1P24864 410 aa13.89□□□□□ -0.19
COL18A1-206ENST00000459895 STX17P56962 302 aa13.89□□□□□ -0.19
COL18A1-206ENST00000459895 ERVFC1P60507 584 aa13.89□□□□□ -0.19
COL18A1-206ENST00000459895 TFAMQ00059 246 aaKnown RBP13.89□□□□□ -0.19
COL18A1-206ENST00000459895 PTPROQ16827 1216 aa13.89□□□□□ -0.19
COL18A1-206ENST00000459895 ANKRD40Q6AI12 368 aa13.89□□□□□ -0.19
COL18A1-206ENST00000459895 TTI2Q6NXR4 508 aa13.89□□□□□ -0.19
COL18A1-206ENST00000459895 DDX53Q86TM3 631 aaKnown RBP13.89□□□□□ -0.19
COL18A1-206ENST00000459895 WDR49Q8IV35 697 aa13.89□□□□□ -0.19
COL18A1-206ENST00000459895 C1orf127Q8N9H9 656 aa13.89□□□□□ -0.19
COL18A1-206ENST00000459895 OR5B17Q8NGF7 314 aa13.89□□□□□ -0.19
COL18A1-206ENST00000459895 CCDC127Q96BQ5 260 aa13.89□□□□□ -0.19
COL18A1-206ENST00000459895 GPR62Q9BZJ7 368 aa13.89□□□□□ -0.19
COL18A1-206ENST00000459895 PRRC2BQ5JSZ5 2229 aaKnown RBP13.88□□□□□ -0.19
COL18A1-206ENST00000459895 B3GAT3O94766 335 aa13.88□□□□□ -0.19
COL18A1-206ENST00000459895 SOD2P04179 222 aa13.88□□□□□ -0.19
COL18A1-206ENST00000459895 ALDH2P05091 517 aa13.88□□□□□ -0.19
COL18A1-206ENST00000459895 ITGB3P05106 788 aa13.88□□□□□ -0.19
COL18A1-206ENST00000459895 TMEM191BP0C7N4 346 aa13.88□□□□□ -0.19
COL18A1-206ENST00000459895 TRIM49P0CI25 452 aa13.88□□□□□ -0.19
COL18A1-206ENST00000459895 TRIM49CP0CI26 452 aa13.88□□□□□ -0.19
COL18A1-206ENST00000459895 PPP1R2P41236 205 aa13.88□□□□□ -0.19
COL18A1-206ENST00000459895 BRCC3P46736 316 aa13.88□□□□□ -0.19
COL18A1-206ENST00000459895 DLG4P78352 724 aa13.88□□□□□ -0.19
COL18A1-206ENST00000459895 KRT17Q04695 432 aa13.88□□□□□ -0.19
COL18A1-206ENST00000459895 MYBPC2Q14324 1141 aa13.88□□□□□ -0.19
COL18A1-206ENST00000459895 PTPN14Q15678 1187 aa13.88□□□□□ -0.19
COL18A1-206ENST00000459895 KLHL40Q2TBA0 621 aa13.88□□□□□ -0.19
COL18A1-206ENST00000459895 RTP2Q5QGT7 225 aa13.88□□□□□ -0.19
COL18A1-206ENST00000459895 C9orf57Q5W0N0 161 aa13.88□□□□□ -0.19
COL18A1-206ENST00000459895 SCARA3Q6AZY7 606 aa13.88□□□□□ -0.19
COL18A1-206ENST00000459895 TAS1R1Q7RTX1 841 aa13.88□□□□□ -0.19
COL18A1-206ENST00000459895 NT5DC4Q86YG4 428 aa13.88□□□□□ -0.19
COL18A1-206ENST00000459895 FAM186BQ8IYM0 893 aa13.88□□□□□ -0.19
COL18A1-206ENST00000459895 VPS52Q8N1B4 723 aa13.88□□□□□ -0.19
COL18A1-206ENST00000459895 CXorf38Q8TB03 319 aa13.88□□□□□ -0.19
COL18A1-206ENST00000459895 DHTKD1Q96HY7 919 aaPredicted RBP13.88□□□□□ -0.19
COL18A1-206ENST00000459895 MFSD14AQ96MC6 490 aa13.88□□□□□ -0.19
COL18A1-206ENST00000459895 TSPAN18Q96SJ8 248 aa13.88□□□□□ -0.19
COL18A1-206ENST00000459895 DUSP9Q99956 384 aaKnown RBP13.88□□□□□ -0.19
COL18A1-206ENST00000459895 COLEC11Q9BWP8 271 aa13.88□□□□□ -0.19
COL18A1-206ENST00000459895 XIRP2A4UGR9 3374 aa13.88□□□□□ -0.19
COL18A1-206ENST00000459895 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.87□□□□□ -0.19
COL18A1-206ENST00000459895 ANO9A1A5B4 782 aa13.87□□□□□ -0.19
COL18A1-206ENST00000459895 HIDE1A8MVS5 230 aa13.87□□□□□ -0.19
COL18A1-206ENST00000459895 SLC16A3O15427 465 aaKnown RBP13.87□□□□□ -0.19
COL18A1-206ENST00000459895 URODP06132 367 aa13.87□□□□□ -0.19
COL18A1-206ENST00000459895 POU3F3P20264 500 aaPredicted RBP13.87□□□□□ -0.19
COL18A1-206ENST00000459895 TKTP29401 623 aaKnown RBP13.87□□□□□ -0.19
COL18A1-206ENST00000459895 POLR2BP30876 1174 aaKnown RBP13.87□□□□□ -0.19
COL18A1-206ENST00000459895 CA8P35219 290 aa13.87□□□□□ -0.19
COL18A1-206ENST00000459895 GLUD2P49448 558 aa13.87□□□□□ -0.19
COL18A1-206ENST00000459895 NLRP12P59046 1061 aa13.87□□□□□ -0.19
COL18A1-206ENST00000459895 TCEAL5Q5H9L2 206 aa13.87□□□□□ -0.19
COL18A1-206ENST00000459895 C1orf220Q5T0J3 134 aa13.87□□□□□ -0.19
COL18A1-206ENST00000459895 DDX27Q96GQ7 796 aaKnown RBP13.87□□□□□ -0.19
COL18A1-206ENST00000459895 MED15Q96RN5 788 aa13.87□□□□□ -0.19
COL18A1-206ENST00000459895 FNBP1Q96RU3 617 aa13.87□□□□□ -0.19
COL18A1-206ENST00000459895 POP1Q99575 1024 aaKnown RBP13.87□□□□□ -0.19
COL18A1-206ENST00000459895 NSUN3Q9H649 340 aaKnown RBP13.87□□□□□ -0.19
COL18A1-206ENST00000459895 INTS13Q9NVM9 706 aa13.87□□□□□ -0.19
COL18A1-206ENST00000459895 DPP3Q9NY33 737 aa13.87□□□□□ -0.19
COL18A1-206ENST00000459895 SIX4Q9UIU6 781 aa13.87□□□□□ -0.19
COL18A1-206ENST00000459895 ITGA11Q9UKX5 1188 aa13.87□□□□□ -0.19
COL18A1-206ENST00000459895 STXBP5LQ9Y2K9 1186 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms