RNA–Protein interactions for RNA: ENST00000459860.1

SSNA1-202, Transcript of SS nuclear autoantigen 1, humanhuman

TSL 1 (best)

Gene SSNA1, Length 1,170 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1-202ENST00000459860 C2orf71A6NGG8 1288 aa23.62■■□□□ 1.37
SSNA1-202ENST00000459860 HIDE1A8MVS5 230 aa23.62■■□□□ 1.37
SSNA1-202ENST00000459860 F8W810 466 aa23.62■■□□□ 1.37
SSNA1-202ENST00000459860 TMEM189-UBE2V1I3L0A0 370 aa23.62■■□□□ 1.37
SSNA1-202ENST00000459860 MEFVO15553 781 aaPredicted RBP23.62■■□□□ 1.37
SSNA1-202ENST00000459860 B3GAT3O94766 335 aa23.62■■□□□ 1.37
SSNA1-202ENST00000459860 RHOBTB3O94955 611 aa23.62■■□□□ 1.37
SSNA1-202ENST00000459860 IL18RAPO95256 599 aa23.62■■□□□ 1.37
SSNA1-202ENST00000459860 HOXD11P31277 338 aaPredicted RBP23.62■■□□□ 1.37
SSNA1-202ENST00000459860 RPL9P32969 192 aaKnown RBP23.62■■□□□ 1.37
SSNA1-202ENST00000459860 GLUD2P49448 558 aa23.62■■□□□ 1.37
SSNA1-202ENST00000459860 UBE2HP62256 183 aa23.62■■□□□ 1.37
SSNA1-202ENST00000459860 DUSP6Q16828 381 aa23.62■■□□□ 1.37
SSNA1-202ENST00000459860 USP41Q3LFD5 358 aa23.62■■□□□ 1.37
SSNA1-202ENST00000459860 GPD1LQ8N335 351 aa23.62■■□□□ 1.37
SSNA1-202ENST00000459860 GOLGA5Q8TBA6 731 aa23.62■■□□□ 1.37
SSNA1-202ENST00000459860 C18orf25Q96B23 403 aaPredicted RBP23.62■■□□□ 1.37
SSNA1-202ENST00000459860 EMILIN2Q9BXX0 1053 aa23.62■■□□□ 1.37
SSNA1-202ENST00000459860 PCIF1Q9H4Z3 704 aa23.62■■□□□ 1.37
SSNA1-202ENST00000459860 ASB7Q9H672 318 aa23.62■■□□□ 1.37
SSNA1-202ENST00000459860 DERAQ9Y315 318 aa23.62■■□□□ 1.37
SSNA1-202ENST00000459860 IRAK3Q9Y616 596 aa23.62■■□□□ 1.37
SSNA1-202ENST00000459860 C19orf67A6NJJ6 358 aa23.61■■□□□ 1.37
SSNA1-202ENST00000459860 TULP1O00294 542 aaPredicted RBP23.61■■□□□ 1.37
SSNA1-202ENST00000459860 PODXLO00592 558 aa23.61■■□□□ 1.37
SSNA1-202ENST00000459860 TRAPPC3O43617 180 aa23.61■■□□□ 1.37
SSNA1-202ENST00000459860 EXTL3O43909 919 aa23.61■■□□□ 1.37
SSNA1-202ENST00000459860 GADD45BO75293 160 aaPredicted RBP23.61■■□□□ 1.37
SSNA1-202ENST00000459860 SMC2O95347 1197 aa23.61■■□□□ 1.37
SSNA1-202ENST00000459860 SSTR3P32745 418 aaPredicted RBP23.61■■□□□ 1.37
SSNA1-202ENST00000459860 ZP2Q05996 745 aa23.61■■□□□ 1.37
SSNA1-202ENST00000459860 SOX4Q06945 474 aaPredicted RBP23.61■■□□□ 1.37
SSNA1-202ENST00000459860 SPAG1Q07617 926 aa23.61■■□□□ 1.37
SSNA1-202ENST00000459860 STK4Q13043 487 aa23.61■■□□□ 1.37
SSNA1-202ENST00000459860 KCNB1Q14721 858 aa23.61■■□□□ 1.37
SSNA1-202ENST00000459860 TMEM132DQ14C87 1099 aa23.61■■□□□ 1.37
SSNA1-202ENST00000459860 UPP1Q16831 310 aa23.61■■□□□ 1.37
SSNA1-202ENST00000459860 KNOP1Q1ED39 458 aaKnown RBP23.61■■□□□ 1.37
SSNA1-202ENST00000459860 EFHBQ8N7U6 833 aa23.61■■□□□ 1.37
SSNA1-202ENST00000459860 KIAA0895Q8NCT3 520 aa23.61■■□□□ 1.37
SSNA1-202ENST00000459860 BEST2Q8NFU1 509 aa23.61■■□□□ 1.37
SSNA1-202ENST00000459860 AUTS2Q8WXX7 1259 aa23.61■■□□□ 1.37
SSNA1-202ENST00000459860 AGPAT3Q9NRZ7 376 aa23.61■■□□□ 1.37
SSNA1-202ENST00000459860 RBAKQ9NYW8 714 aaPredicted RBP23.61■■□□□ 1.37
SSNA1-202ENST00000459860 C2CD2LO14523 706 aa23.6■■□□□ 1.37
SSNA1-202ENST00000459860 PER2O15055 1255 aa23.6■■□□□ 1.37
SSNA1-202ENST00000459860 ADRB2P07550 413 aa23.6■■□□□ 1.37
SSNA1-202ENST00000459860 CYP3A5P20815 502 aa23.6■■□□□ 1.37
SSNA1-202ENST00000459860 HOXD13P35453 343 aa23.6■■□□□ 1.37
SSNA1-202ENST00000459860 NDUFV1P49821 464 aa23.6■■□□□ 1.37
SSNA1-202ENST00000459860 DLX2Q07687 328 aaPredicted RBP23.6■■□□□ 1.37
SSNA1-202ENST00000459860 PNOCQ13519 176 aa23.6■■□□□ 1.37
SSNA1-202ENST00000459860 PTPN14Q15678 1187 aa23.6■■□□□ 1.37
SSNA1-202ENST00000459860 JADE1Q6IE81 842 aa23.6■■□□□ 1.37
SSNA1-202ENST00000459860 BRSK2Q8IWQ3 736 aa23.6■■□□□ 1.37
SSNA1-202ENST00000459860 RNF168Q8IYW5 571 aaPredicted RBP23.6■■□□□ 1.37
SSNA1-202ENST00000459860 GPR62Q9BZJ7 368 aa23.6■■□□□ 1.37
SSNA1-202ENST00000459860 KIAA1586Q9HCI6 787 aa23.6■■□□□ 1.37
SSNA1-202ENST00000459860 HSPBP1Q9NZL4 362 aa23.6■■□□□ 1.37
SSNA1-202ENST00000459860 TUBGCP4Q9UGJ1 667 aa23.6■■□□□ 1.37
SSNA1-202ENST00000459860 NUB1Q9Y5A7 615 aa23.6■■□□□ 1.37
SSNA1-202ENST00000459860 GOLGA8IPA6NC78 632 aa23.59■■□□□ 1.37
SSNA1-202ENST00000459860 GOLGA8JA6NMD2 632 aa23.59■■□□□ 1.37
SSNA1-202ENST00000459860 PRR33A8MZF0 331 aa23.59■■□□□ 1.37
SSNA1-202ENST00000459860 GTF2F1P35269 517 aaKnown RBP eCLIP23.59■■□□□ 1.37
SSNA1-202ENST00000459860 CREMQ03060 361 aa23.59■■□□□ 1.37
SSNA1-202ENST00000459860 CRELD2Q6UXH1 353 aaPredicted RBP23.59■■□□□ 1.37
SSNA1-202ENST00000459860 PRKAG3Q9UGI9 489 aa23.59■■□□□ 1.37
SSNA1-202ENST00000459860 C2CD2Q9Y426 696 aa23.59■■□□□ 1.37
SSNA1-202ENST00000459860 TGFB1I1O43294 461 aa23.58■■□□□ 1.37
SSNA1-202ENST00000459860 PRPF40AO75400 957 aaKnown RBP23.58■■□□□ 1.37
SSNA1-202ENST00000459860 EFEMP2O95967 443 aa23.58■■□□□ 1.37
SSNA1-202ENST00000459860 ALADP13716 330 aa23.58■■□□□ 1.37
SSNA1-202ENST00000459860 DSG1Q02413 1049 aa23.58■■□□□ 1.37
SSNA1-202ENST00000459860 FAM171A1Q5VUB5 890 aa23.58■■□□□ 1.37
SSNA1-202ENST00000459860 CEP57Q86XR8 500 aa23.58■■□□□ 1.37
SSNA1-202ENST00000459860 NT5DC4Q86YG4 428 aa23.58■■□□□ 1.37
SSNA1-202ENST00000459860 SMARCE1Q969G3 411 aa23.58■■□□□ 1.37
SSNA1-202ENST00000459860 GBP4Q96PP9 640 aa23.58■■□□□ 1.37
SSNA1-202ENST00000459860 GSDMAQ96QA5 445 aa23.58■■□□□ 1.37
SSNA1-202ENST00000459860 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP23.58■■□□□ 1.37
SSNA1-202ENST00000459860 ZNF233A6NK53 670 aa23.57■■□□□ 1.36
SSNA1-202ENST00000459860 CLIC2O15247 247 aa23.57■■□□□ 1.36
SSNA1-202ENST00000459860 NFICP08651 508 aa23.57■■□□□ 1.36
SSNA1-202ENST00000459860 LRPAP1P30533 357 aa23.57■■□□□ 1.36
SSNA1-202ENST00000459860 CYP2J2P51589 502 aa23.57■■□□□ 1.36
SSNA1-202ENST00000459860 ADAM15Q13444 863 aa23.57■■□□□ 1.36
SSNA1-202ENST00000459860 ZBTB6Q15916 424 aa23.57■■□□□ 1.36
SSNA1-202ENST00000459860 SPATA1Q5VX52 437 aa23.57■■□□□ 1.36
SSNA1-202ENST00000459860 PDXDC1Q6P996 788 aa23.57■■□□□ 1.36
SSNA1-202ENST00000459860 PDZRN4Q6ZMN7 1036 aaPredicted RBP23.57■■□□□ 1.36
SSNA1-202ENST00000459860 TAS1R1Q7RTX1 841 aa23.57■■□□□ 1.36
SSNA1-202ENST00000459860 PPFIBP1Q86W92 1011 aa23.57■■□□□ 1.36
SSNA1-202ENST00000459860 ADHFE1Q8IWW8 467 aa23.57■■□□□ 1.36
SSNA1-202ENST00000459860 ELOA2Q8IYF1 753 aaPredicted RBP23.57■■□□□ 1.36
SSNA1-202ENST00000459860 GPR65Q8IYL9 337 aa23.57■■□□□ 1.36
SSNA1-202ENST00000459860 XXYLT1Q8NBI6 393 aa23.57■■□□□ 1.36
SSNA1-202ENST00000459860 RIN2Q8WYP3 895 aaPredicted RBP23.57■■□□□ 1.36
SSNA1-202ENST00000459860 TTPALQ9BTX7 342 aa23.57■■□□□ 1.36
SSNA1-202ENST00000459860 GTPBP4Q9BZE4 634 aaKnown RBP23.57■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms