RNA–Protein interactions for RNA: ENST00000458610.6

CD28-203, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-203ENST00000458610 RPN1P04843 607 aaKnown RBP17.53■□□□□ 0.4
CD28-203ENST00000458610 LRPAP1P30533 357 aa17.53■□□□□ 0.4
CD28-203ENST00000458610 KCNQ1P51787 676 aa17.53■□□□□ 0.4
CD28-203ENST00000458610 FAM160A1Q05DH4 1040 aa17.53■□□□□ 0.4
CD28-203ENST00000458610 SOX4Q06945 474 aaPredicted RBP17.53■□□□□ 0.4
CD28-203ENST00000458610 SMAD4Q13485 552 aaKnown RBP17.53■□□□□ 0.4
CD28-203ENST00000458610 KCNC3Q14003 757 aa17.53■□□□□ 0.4
CD28-203ENST00000458610 TMEM132DQ14C87 1099 aa17.53■□□□□ 0.4
CD28-203ENST00000458610 SURF1Q15526 300 aa17.53■□□□□ 0.4
CD28-203ENST00000458610 KNOP1Q1ED39 458 aaKnown RBP17.53■□□□□ 0.4
CD28-203ENST00000458610 BMT2Q1RMZ1 405 aa17.53■□□□□ 0.4
CD28-203ENST00000458610 ZBTB41Q5SVQ8 909 aa17.53■□□□□ 0.4
CD28-203ENST00000458610 SPATA1Q5VX52 437 aa17.53■□□□□ 0.4
CD28-203ENST00000458610 ANKRD54Q6NXT1 300 aa17.53■□□□□ 0.4
CD28-203ENST00000458610 LLGL2Q6P1M3 1020 aa17.53■□□□□ 0.4
CD28-203ENST00000458610 GPD1LQ8N335 351 aa17.53■□□□□ 0.4
CD28-203ENST00000458610 SCFD1Q8WVM8 642 aa17.53■□□□□ 0.4
CD28-203ENST00000458610 PIK3R5Q8WYR1 880 aa17.53■□□□□ 0.4
CD28-203ENST00000458610 C18orf25Q96B23 403 aaPredicted RBP17.53■□□□□ 0.4
CD28-203ENST00000458610 MSLNLQ96KJ4 702 aa17.53■□□□□ 0.4
CD28-203ENST00000458610 TIGD1Q96MW7 591 aa17.53■□□□□ 0.4
CD28-203ENST00000458610 CLEC1BQ9P126 229 aa17.53■□□□□ 0.4
CD28-203ENST00000458610 CACNG4Q9UBN1 327 aa17.53■□□□□ 0.4
CD28-203ENST00000458610 HCFC2Q9Y5Z7 792 aa17.53■□□□□ 0.4
CD28-203ENST00000458610 ARHGEF37A1IGU5 675 aa17.52■□□□□ 0.4
CD28-203ENST00000458610 ZNF233A6NK53 670 aa17.52■□□□□ 0.4
CD28-203ENST00000458610 SPDYE4A6NLX3 237 aa17.52■□□□□ 0.4
CD28-203ENST00000458610 SYN3O14994 580 aa17.52■□□□□ 0.4
CD28-203ENST00000458610 MEFVO15553 781 aaPredicted RBP17.52■□□□□ 0.4
CD28-203ENST00000458610 KLRC4O43908 158 aa17.52■□□□□ 0.4
CD28-203ENST00000458610 TBX10O75333 385 aa17.52■□□□□ 0.4
CD28-203ENST00000458610 FGFR3P22607 806 aa17.52■□□□□ 0.4
CD28-203ENST00000458610 MCM4P33991 863 aa17.52■□□□□ 0.4
CD28-203ENST00000458610 SPAG1Q07617 926 aa17.52■□□□□ 0.4
CD28-203ENST00000458610 DLX2Q07687 328 aaPredicted RBP17.52■□□□□ 0.4
CD28-203ENST00000458610 JADE1Q6IE81 842 aa17.52■□□□□ 0.4
CD28-203ENST00000458610 CES5AQ6NT32 575 aa17.52■□□□□ 0.4
CD28-203ENST00000458610 ANKS3Q6ZW76 656 aa17.52■□□□□ 0.4
CD28-203ENST00000458610 FMR1NBQ8N0W7 255 aaPredicted RBP17.52■□□□□ 0.4
CD28-203ENST00000458610 APPL2Q8NEU8 664 aa17.52■□□□□ 0.4
CD28-203ENST00000458610 NOC3LQ8WTT2 800 aaKnown RBP17.52■□□□□ 0.4
CD28-203ENST00000458610 SLC22A17Q8WUG5 538 aa17.52■□□□□ 0.4
CD28-203ENST00000458610 HDAC7Q8WUI4 952 aa17.52■□□□□ 0.4
CD28-203ENST00000458610 CBWD1Q9BRT8 395 aa17.52■□□□□ 0.4
CD28-203ENST00000458610 GTPBP4Q9BZE4 634 aaKnown RBP17.52■□□□□ 0.4
CD28-203ENST00000458610 RMND1Q9NWS8 449 aa17.52■□□□□ 0.4
CD28-203ENST00000458610 RBAKQ9NYW8 714 aaPredicted RBP17.52■□□□□ 0.4
CD28-203ENST00000458610 BARX2Q9UMQ3 279 aaPredicted RBP17.52■□□□□ 0.4
CD28-203ENST00000458610 TRANK1O15050 2925 aa17.51■□□□□ 0.39
CD28-203ENST00000458610 H7C4K7 107 aa17.51■□□□□ 0.39
CD28-203ENST00000458610 TULP1O00294 542 aaPredicted RBP17.51■□□□□ 0.39
CD28-203ENST00000458610 TEX28O15482 410 aa17.51■□□□□ 0.39
CD28-203ENST00000458610 RHOBTB3O94955 611 aa17.51■□□□□ 0.39
CD28-203ENST00000458610 SMC2O95347 1197 aa17.51■□□□□ 0.39
CD28-203ENST00000458610 GLP2RO95838 553 aa17.51■□□□□ 0.39
CD28-203ENST00000458610 GLUD1P00367 558 aa17.51■□□□□ 0.39
CD28-203ENST00000458610 CLCN4P51793 760 aa17.51■□□□□ 0.39
CD28-203ENST00000458610 ITIH3Q06033 890 aa17.51■□□□□ 0.39
CD28-203ENST00000458610 DPYDQ12882 1025 aa17.51■□□□□ 0.39
CD28-203ENST00000458610 STK4Q13043 487 aa17.51■□□□□ 0.39
CD28-203ENST00000458610 KCNB1Q14721 858 aa17.51■□□□□ 0.39
CD28-203ENST00000458610 PSMD5Q16401 504 aa17.51■□□□□ 0.39
CD28-203ENST00000458610 CRELD2Q6UXH1 353 aaPredicted RBP17.51■□□□□ 0.39
CD28-203ENST00000458610 BRSK2Q8IWQ3 736 aa17.51■□□□□ 0.39
CD28-203ENST00000458610 NELFCDQ8IXH7 590 aa17.51■□□□□ 0.39
CD28-203ENST00000458610 GLIS3Q8NEA6 775 aa17.51■□□□□ 0.39
CD28-203ENST00000458610 ADAMTS19Q8TE59 1207 aa17.51■□□□□ 0.39
CD28-203ENST00000458610 SAAL1Q96ER3 474 aa17.51■□□□□ 0.39
CD28-203ENST00000458610 IKZF4Q9H2S9 585 aa17.51■□□□□ 0.39
CD28-203ENST00000458610 PCIF1Q9H4Z3 704 aa17.51■□□□□ 0.39
CD28-203ENST00000458610 PRKAG3Q9UGI9 489 aa17.51■□□□□ 0.39
CD28-203ENST00000458610 TUBGCP4Q9UGJ1 667 aa17.51■□□□□ 0.39
CD28-203ENST00000458610 MBTPS2O43462 519 aa17.5■□□□□ 0.39
CD28-203ENST00000458610 HOXD13P35453 343 aa17.5■□□□□ 0.39
CD28-203ENST00000458610 CLUL1Q15846 466 aa17.5■□□□□ 0.39
CD28-203ENST00000458610 RTP2Q5QGT7 225 aa17.5■□□□□ 0.39
CD28-203ENST00000458610 CD300LGQ6UXG3 332 aa17.5■□□□□ 0.39
CD28-203ENST00000458610 ELOA2Q8IYF1 753 aaPredicted RBP17.5■□□□□ 0.39
CD28-203ENST00000458610 XXYLT1Q8NBI6 393 aa17.5■□□□□ 0.39
CD28-203ENST00000458610 SMRP1Q8NCR6 262 aa17.5■□□□□ 0.39
CD28-203ENST00000458610 ENGASEQ8NFI3 743 aa17.5■□□□□ 0.39
CD28-203ENST00000458610 VN1R2Q8NFZ6 395 aa17.5■□□□□ 0.39
CD28-203ENST00000458610 LNX1Q8TBB1 728 aaPredicted RBP17.5■□□□□ 0.39
CD28-203ENST00000458610 SUSD3Q96L08 255 aa17.5■□□□□ 0.39
CD28-203ENST00000458610 B3GALT6Q96L58 329 aa17.5■□□□□ 0.39
CD28-203ENST00000458610 FBXL18Q96ME1 805 aa17.5■□□□□ 0.39
CD28-203ENST00000458610 PLEKHA4Q9H4M7 779 aa17.5■□□□□ 0.39
CD28-203ENST00000458610 AGPAT3Q9NRZ7 376 aa17.5■□□□□ 0.39
CD28-203ENST00000458610 DPP3Q9NY33 737 aa17.5■□□□□ 0.39
CD28-203ENST00000458610 HSPBP1Q9NZL4 362 aa17.5■□□□□ 0.39
CD28-203ENST00000458610 R3HCC1Q9Y3T6 440 aaKnown RBP17.5■□□□□ 0.39
CD28-203ENST00000458610 BACE2Q9Y5Z0 518 aa17.5■□□□□ 0.39
CD28-203ENST00000458610 TCHHQ07283 1943 aa17.5■□□□□ 0.39
CD28-203ENST00000458610 GOLGA8IPA6NC78 632 aa17.49■□□□□ 0.39
CD28-203ENST00000458610 GOLGA8JA6NMD2 632 aa17.49■□□□□ 0.39
CD28-203ENST00000458610 DLL1O00548 723 aa17.49■□□□□ 0.39
CD28-203ENST00000458610 TGFB1I1O43294 461 aa17.49■□□□□ 0.39
CD28-203ENST00000458610 KINO60870 393 aaKnown RBP17.49■□□□□ 0.39
CD28-203ENST00000458610 NFICP08651 508 aa17.49■□□□□ 0.39
CD28-203ENST00000458610 BRCC3P46736 316 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms