RNA–Protein interactions for RNA: ENST00000457828.6

LSS-205, Transcript of lanosterol synthase, humanhuman

TSL 1 (best) BASIC

Gene LSS, Length 4,390 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-205ENST00000457828 EPM2AIP1Q7L775 607 aaPredicted RBP17.33■□□□□ 0.36
LSS-205ENST00000457828 MTMR9Q96QG7 549 aa17.33■□□□□ 0.36
LSS-205ENST00000457828 FGFBP2Q9BYJ0 223 aa17.33■□□□□ 0.36
LSS-205ENST00000457828 PITPNM2Q9BZ72 1349 aa17.33■□□□□ 0.36
LSS-205ENST00000457828 SGK1O00141 431 aa17.32■□□□□ 0.36
LSS-205ENST00000457828 LUC7L3O95232 432 aaKnown RBP17.32■□□□□ 0.36
LSS-205ENST00000457828 CD58P19256 250 aa17.32■□□□□ 0.36
LSS-205ENST00000457828 RPA1P27694 616 aa17.32■□□□□ 0.36
LSS-205ENST00000457828 FLT3P36888 993 aa17.32■□□□□ 0.36
LSS-205ENST00000457828 DYNLT1P63172 113 aa17.32■□□□□ 0.36
LSS-205ENST00000457828 SH3BP5LQ7L8J4 393 aa17.32■□□□□ 0.36
LSS-205ENST00000457828 BTBD6Q96KE9 485 aa17.32■□□□□ 0.36
LSS-205ENST00000457828 SLC38A10Q9HBR0 1119 aa17.32■□□□□ 0.36
LSS-205ENST00000457828 SEL1LQ9UBV2 794 aa17.32■□□□□ 0.36
LSS-205ENST00000457828 IGF2BP3O00425 579 aaKnown RBP eCLIP17.32■□□□□ 0.36
LSS-205ENST00000457828 DDX3XO00571 662 aaKnown RBP eCLIP17.32■□□□□ 0.36
LSS-205ENST00000457828 MAN1A1P33908 653 aa17.32■□□□□ 0.36
LSS-205ENST00000457828 GIT2Q14161 759 aa17.32■□□□□ 0.36
LSS-205ENST00000457828 PASD1Q8IV76 773 aa17.32■□□□□ 0.36
LSS-205ENST00000457828 BBOF1Q8ND07 529 aa17.32■□□□□ 0.36
LSS-205ENST00000457828 ZNF384Q8TF68 577 aa17.32■□□□□ 0.36
LSS-205ENST00000457828 SAAL1Q96ER3 474 aa17.32■□□□□ 0.36
LSS-205ENST00000457828 VCXQ9H320 206 aa17.32■□□□□ 0.36
LSS-205ENST00000457828 INTUQ9ULD6 942 aa17.32■□□□□ 0.36
LSS-205ENST00000457828 NID2Q14112 1375 aa17.32■□□□□ 0.36
LSS-205ENST00000457828 FOXN3O00409 490 aaPredicted RBP17.32■□□□□ 0.36
LSS-205ENST00000457828 SMIM24O75264 130 aa17.32■□□□□ 0.36
LSS-205ENST00000457828 USP2O75604 605 aaPredicted RBP17.32■□□□□ 0.36
LSS-205ENST00000457828 SCARA5Q6ZMJ2 495 aa17.32■□□□□ 0.36
LSS-205ENST00000457828 SPATS2LQ9NUQ6 558 aaKnown RBP17.32■□□□□ 0.36
LSS-205ENST00000457828 MAP3K20Q9NYL2 800 aaKnown RBP17.32■□□□□ 0.36
LSS-205ENST00000457828 DOT1LQ8TEK3 1739 aa17.31■□□□□ 0.36
LSS-205ENST00000457828 LRRD1A4D1F6 860 aa17.31■□□□□ 0.36
LSS-205ENST00000457828 STAM2O75886 525 aa17.31■□□□□ 0.36
LSS-205ENST00000457828 LDHAP00338 332 aaKnown RBP17.31■□□□□ 0.36
LSS-205ENST00000457828 TNFRSF8P28908 595 aa17.31■□□□□ 0.36
LSS-205ENST00000457828 RNF25Q96BH1 459 aaPredicted RBP17.31■□□□□ 0.36
LSS-205ENST00000457828 WNK4Q96J92 1243 aa17.31■□□□□ 0.36
LSS-205ENST00000457828 FAM129AQ9BZQ8 928 aa17.31■□□□□ 0.36
LSS-205ENST00000457828 CICQ96RK0 1608 aaPredicted RBP17.31■□□□□ 0.36
LSS-205ENST00000457828 GRIN2DO15399 1336 aa17.31■□□□□ 0.36
LSS-205ENST00000457828 RASSF10A6NK89 507 aa17.31■□□□□ 0.36
LSS-205ENST00000457828 OPLAHO14841 1288 aa17.31■□□□□ 0.36
LSS-205ENST00000457828 SLC16A3O15427 465 aaKnown RBP17.31■□□□□ 0.36
LSS-205ENST00000457828 YBX3P16989 372 aaKnown RBP eCLIP17.31■□□□□ 0.364e-6■□□□□ 8.3
LSS-205ENST00000457828 SCP2P22307 547 aa17.31■□□□□ 0.36
LSS-205ENST00000457828 SNX25Q9H3E2 840 aa17.31■□□□□ 0.36
LSS-205ENST00000457828 SSTR3P32745 418 aaPredicted RBP17.31■□□□□ 0.36
LSS-205ENST00000457828 CPT1AP50416 773 aa17.31■□□□□ 0.36
LSS-205ENST00000457828 GABPAQ06546 454 aa17.31■□□□□ 0.36
LSS-205ENST00000457828 KCNA1Q09470 495 aa17.31■□□□□ 0.36
LSS-205ENST00000457828 QPCTQ16769 361 aa17.31■□□□□ 0.36
LSS-205ENST00000457828 MTMR14Q8NCE2 650 aa17.31■□□□□ 0.36
LSS-205ENST00000457828 DNAJC19Q96DA6 116 aa17.31■□□□□ 0.36
LSS-205ENST00000457828 MRPL4Q9BYD3 311 aaKnown RBP17.31■□□□□ 0.36
LSS-205ENST00000457828 DCTN4Q9UJW0 460 aa17.31■□□□□ 0.36
LSS-205ENST00000457828 L3MBTL1Q9Y468 752 aa17.31■□□□□ 0.36
LSS-205ENST00000457828 CIB2O75838 187 aa17.31■□□□□ 0.36
LSS-205ENST00000457828 CPP00450 1065 aa17.31■□□□□ 0.36
LSS-205ENST00000457828 MREGQ8N565 214 aa17.31■□□□□ 0.36
LSS-205ENST00000457828 AFG1LQ8WV93 481 aa17.31■□□□□ 0.36
LSS-205ENST00000457828 RSAD2Q8WXG1 361 aa17.31■□□□□ 0.36
LSS-205ENST00000457828 RILPQ96NA2 401 aa17.31■□□□□ 0.36
LSS-205ENST00000457828 WNT8AQ9H1J5 351 aa17.31■□□□□ 0.36
LSS-205ENST00000457828 PIN4Q9Y237 131 aaKnown RBP17.31■□□□□ 0.36
LSS-205ENST00000457828 GOLGA8SH3BPF8 625 aa17.3■□□□□ 0.36
LSS-205ENST00000457828 GOLGA8MH3BSY2 632 aa17.3■□□□□ 0.36
LSS-205ENST00000457828 CAPN9O14815 690 aa17.3■□□□□ 0.36
LSS-205ENST00000457828 HBP1O60381 514 aa17.3■□□□□ 0.36
LSS-205ENST00000457828 BAG2O95816 211 aa17.3■□□□□ 0.36
LSS-205ENST00000457828 TMEM119Q4V9L6 283 aa17.3■□□□□ 0.36
LSS-205ENST00000457828 DSTYKQ6XUX3 929 aa17.3■□□□□ 0.36
LSS-205ENST00000457828 NT5DC3Q86UY8 548 aa17.3■□□□□ 0.36
LSS-205ENST00000457828 SYT2Q8N9I0 419 aaPredicted RBP17.3■□□□□ 0.36
LSS-205ENST00000457828 LRRC37BQ96QE4 947 aa17.3■□□□□ 0.36
LSS-205ENST00000457828 MAK16Q9BXY0 300 aaKnown RBP17.3■□□□□ 0.36
LSS-205ENST00000457828 ARL2BPQ9Y2Y0 163 aa17.3■□□□□ 0.36
LSS-205ENST00000457828 SPDYE5A6NIY4 337 aa17.3■□□□□ 0.36
LSS-205ENST00000457828 CLGNO14967 610 aa17.3■□□□□ 0.36
LSS-205ENST00000457828 MAGEB2O15479 319 aa17.3■□□□□ 0.36
LSS-205ENST00000457828 FGRP09769 529 aa17.3■□□□□ 0.36
LSS-205ENST00000457828 ANXA13P27216 316 aa17.3■□□□□ 0.36
LSS-205ENST00000457828 OAZ1P54368 228 aa17.3■□□□□ 0.36
LSS-205ENST00000457828 AADACL2Q6P093 401 aa17.3■□□□□ 0.36
LSS-205ENST00000457828 METTL23Q86XA0 190 aa17.3■□□□□ 0.36
LSS-205ENST00000457828 CFAP57Q96MR6 1250 aa17.3■□□□□ 0.36
LSS-205ENST00000457828 MYH8P13535 1937 aa17.3■□□□□ 0.36
LSS-205ENST00000457828 UBOX5O94941 541 aa17.3■□□□□ 0.36
LSS-205ENST00000457828 SURF1Q15526 300 aa17.3■□□□□ 0.36
LSS-205ENST00000457828 ECM1Q16610 540 aa17.3■□□□□ 0.36
LSS-205ENST00000457828 CD302Q8IX05 232 aa17.3■□□□□ 0.36
LSS-205ENST00000457828 C7orf43Q8WVR3 580 aa17.3■□□□□ 0.36
LSS-205ENST00000457828 UNC45AQ9H3U1 944 aa17.3■□□□□ 0.36
LSS-205ENST00000457828 MAPK13O15264 365 aa17.29■□□□□ 0.36
LSS-205ENST00000457828 SKAP2O75563 359 aaPredicted RBP17.29■□□□□ 0.36
LSS-205ENST00000457828 SHBGP04278 402 aa17.29■□□□□ 0.36
LSS-205ENST00000457828 ATN1P54259 1190 aaPredicted RBP17.29■□□□□ 0.36
LSS-205ENST00000457828 ARMCX2Q7L311 632 aa17.29■□□□□ 0.36
LSS-205ENST00000457828 C11orf70Q9BRQ4 267 aa17.29■□□□□ 0.36
LSS-205ENST00000457828 A0A0G2JND7 137 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms