RNA–Protein interactions for RNA: ENST00000457422.6

CCDC43-202, Transcript of coiled-coil domain containing 43, humanhuman

TSL 1 (best) BASIC

Gene CCDC43, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-202ENST00000457422 MARK3P27448 753 aa17.83■□□□□ 0.44
CCDC43-202ENST00000457422 SIX1Q15475 284 aaPredicted RBP17.83■□□□□ 0.44
CCDC43-202ENST00000457422 CEP85LQ5SZL2 805 aa17.83■□□□□ 0.44
CCDC43-202ENST00000457422 MON1BQ7L1V2 547 aa17.83■□□□□ 0.44
CCDC43-202ENST00000457422 EXOC8Q8IYI6 725 aa17.83■□□□□ 0.44
CCDC43-202ENST00000457422 ANKRD13AQ8IZ07 590 aa17.83■□□□□ 0.44
CCDC43-202ENST00000457422 SH2D3CQ8N5H7 860 aa17.83■□□□□ 0.44
CCDC43-202ENST00000457422 OR5B17Q8NGF7 314 aa17.83■□□□□ 0.44
CCDC43-202ENST00000457422 PRPF31Q8WWY3 499 aaKnown RBP17.83■□□□□ 0.44
CCDC43-202ENST00000457422 MAGOHBQ96A72 148 aaKnown RBP17.83■□□□□ 0.44
CCDC43-202ENST00000457422 C18orf8Q96DM3 657 aa17.83■□□□□ 0.44
CCDC43-202ENST00000457422 PLVAPQ9BX97 442 aa17.83■□□□□ 0.44
CCDC43-202ENST00000457422 TXNRD2Q9NNW7 524 aa17.83■□□□□ 0.44
CCDC43-202ENST00000457422 RNF181Q9P0P0 153 aa17.83■□□□□ 0.44
CCDC43-202ENST00000457422 ANAPC7Q9UJX3 599 aa17.83■□□□□ 0.44
CCDC43-202ENST00000457422 MTUS1Q9ULD2 1270 aa17.83■□□□□ 0.44
CCDC43-202ENST00000457422 GRIN2DO15399 1336 aa17.82■□□□□ 0.44
CCDC43-202ENST00000457422 MROH7Q68CQ1 1323 aa17.82■□□□□ 0.44
CCDC43-202ENST00000457422 IGKV6-21A0A0C4DH24 114 aa17.82■□□□□ 0.44
CCDC43-202ENST00000457422 TTLL13PA6NNM8 815 aa17.82■□□□□ 0.44
CCDC43-202ENST00000457422 PPFIA4O75335 1185 aa17.82■□□□□ 0.44
CCDC43-202ENST00000457422 MAPK4P31152 587 aa17.82■□□□□ 0.44
CCDC43-202ENST00000457422 SLC1A1P43005 524 aa17.82■□□□□ 0.44
CCDC43-202ENST00000457422 NSFP46459 744 aaKnown RBP17.82■□□□□ 0.44
CCDC43-202ENST00000457422 NOP14P78316 857 aaKnown RBP17.82■□□□□ 0.44
CCDC43-202ENST00000457422 KCTD16Q68DU8 428 aa17.82■□□□□ 0.44
CCDC43-202ENST00000457422 PPP1R2P3Q6NXS1 205 aa17.82■□□□□ 0.44
CCDC43-202ENST00000457422 TRIM50Q86XT4 487 aa17.82■□□□□ 0.44
CCDC43-202ENST00000457422 TCP11Q8WWU5 503 aa17.82■□□□□ 0.44
CCDC43-202ENST00000457422 GPR20Q99678 358 aa17.82■□□□□ 0.44
CCDC43-202ENST00000457422 MRPL4Q9BYD3 311 aaKnown RBP17.82■□□□□ 0.44
CCDC43-202ENST00000457422 UMODL1Q5DID0 1318 aa17.82■□□□□ 0.44
CCDC43-202ENST00000457422 GOLGA6L10A6NI86 522 aa17.81■□□□□ 0.44
CCDC43-202ENST00000457422 CLDN3O15551 220 aa17.81■□□□□ 0.44
CCDC43-202ENST00000457422 TOM1L1O75674 476 aa17.81■□□□□ 0.44
CCDC43-202ENST00000457422 RRM1P23921 792 aa17.81■□□□□ 0.44
CCDC43-202ENST00000457422 FNTAP49354 379 aa17.81■□□□□ 0.44
CCDC43-202ENST00000457422 ZNF844Q08AG5 666 aa17.81■□□□□ 0.44
CCDC43-202ENST00000457422 SMYD5Q6GMV2 418 aa17.81■□□□□ 0.44
CCDC43-202ENST00000457422 TTC27Q6P3X3 843 aa17.81■□□□□ 0.44
CCDC43-202ENST00000457422 CCDC137Q6PK04 289 aaKnown RBP17.81■□□□□ 0.44
CCDC43-202ENST00000457422 PLPPR4Q7Z2D5 763 aa17.81■□□□□ 0.44
CCDC43-202ENST00000457422 ABRAQ8N0Z2 381 aa17.81■□□□□ 0.44
CCDC43-202ENST00000457422 CPA5Q8WXQ8 436 aa17.81■□□□□ 0.44
CCDC43-202ENST00000457422 VCPIP1Q96JH7 1222 aa17.81■□□□□ 0.44
CCDC43-202ENST00000457422 DNAJC25-GNG10A0A024R161 153 aa17.81■□□□□ 0.44
CCDC43-202ENST00000457422 EIF3HO15372 352 aaKnown RBP eCLIP17.81■□□□□ 0.44
CCDC43-202ENST00000457422 MYZAPP0CAP1 466 aa17.81■□□□□ 0.44
CCDC43-202ENST00000457422 DHX9Q08211 1270 aaKnown RBP17.81■□□□□ 0.44
CCDC43-202ENST00000457422 MXD4Q14582 209 aaPredicted RBP17.81■□□□□ 0.44
CCDC43-202ENST00000457422 DNAJC21Q5F1R6 531 aaKnown RBP17.81■□□□□ 0.44
CCDC43-202ENST00000457422 CELF3Q5SZQ8 465 aaKnown RBP17.81■□□□□ 0.44
CCDC43-202ENST00000457422 ZDHHC24Q6UX98 284 aa17.81■□□□□ 0.44
CCDC43-202ENST00000457422 WDR49Q8IV35 697 aa17.81■□□□□ 0.44
CCDC43-202ENST00000457422 UBR7Q8N806 425 aa17.81■□□□□ 0.44
CCDC43-202ENST00000457422 UBLCP1Q8WVY7 318 aaPredicted RBP17.81■□□□□ 0.44
CCDC43-202ENST00000457422 CDCA5Q96FF9 252 aa17.81■□□□□ 0.44
CCDC43-202ENST00000457422 PCDHB4Q9Y5E5 795 aa17.81■□□□□ 0.44
CCDC43-202ENST00000457422 TCRBV7S2A1N4TA0A589 114 aa17.8■□□□□ 0.44
CCDC43-202ENST00000457422 ZBTB42B2RXF5 422 aa17.8■□□□□ 0.44
CCDC43-202ENST00000457422 FSCN2O14926 492 aa17.8■□□□□ 0.44
CCDC43-202ENST00000457422 ERLIN2O94905 339 aa17.8■□□□□ 0.44
CCDC43-202ENST00000457422 NR1D1P20393 614 aa17.8■□□□□ 0.44
CCDC43-202ENST00000457422 GNA15P30679 374 aa17.8■□□□□ 0.44
CCDC43-202ENST00000457422 COILP38432 576 aaPredicted RBP17.8■□□□□ 0.44
CCDC43-202ENST00000457422 NOMO3P69849 1222 aa17.8■□□□□ 0.44
CCDC43-202ENST00000457422 PPIL2Q13356 520 aa17.8■□□□□ 0.44
CCDC43-202ENST00000457422 MKRN4PQ13434 485 aaPredicted RBP17.8■□□□□ 0.44
CCDC43-202ENST00000457422 NCOA4Q13772 614 aa17.8■□□□□ 0.44
CCDC43-202ENST00000457422 TMEM270Q6UE05 265 aa17.8■□□□□ 0.44
CCDC43-202ENST00000457422 RUFY4Q6ZNE9 571 aa17.8■□□□□ 0.44
CCDC43-202ENST00000457422 PHLDB2Q86SQ0 1253 aa17.8■□□□□ 0.44
CCDC43-202ENST00000457422 ZBTB33Q86T24 672 aa17.8■□□□□ 0.44
CCDC43-202ENST00000457422 CYFIP2Q96F07 1278 aa17.8■□□□□ 0.44
CCDC43-202ENST00000457422 ACO2Q99798 780 aaKnown RBP17.8■□□□□ 0.44
CCDC43-202ENST00000457422 TRIM7Q9C029 511 aa17.8■□□□□ 0.44
CCDC43-202ENST00000457422 LRRC19Q9H756 370 aa17.8■□□□□ 0.44
CCDC43-202ENST00000457422 GRHL1Q9NZI5 618 aa17.8■□□□□ 0.44
CCDC43-202ENST00000457422 RBPJLQ9UBG7 517 aa17.8■□□□□ 0.44
CCDC43-202ENST00000457422 PARP2Q9UGN5 583 aa17.8■□□□□ 0.44
CCDC43-202ENST00000457422 NUB1Q9Y5A7 615 aa17.8■□□□□ 0.44
CCDC43-202ENST00000457422 LOC102724159A0A0B4J2E5 919 aa17.79■□□□□ 0.44
CCDC43-202ENST00000457422 CFHP08603 1231 aa17.79■□□□□ 0.44
CCDC43-202ENST00000457422 RARAP10276 462 aa17.79■□□□□ 0.44
CCDC43-202ENST00000457422 TNFSF9P41273 254 aa17.79■□□□□ 0.44
CCDC43-202ENST00000457422 ZNF132P52740 706 aa17.79■□□□□ 0.44
CCDC43-202ENST00000457422 GNGT1P63211 74 aa17.79■□□□□ 0.44
CCDC43-202ENST00000457422 LAMTOR4Q0VGL1 99 aa17.79■□□□□ 0.44
CCDC43-202ENST00000457422 MOGSQ13724 837 aa17.79■□□□□ 0.44
CCDC43-202ENST00000457422 TTLL12Q14166 644 aaPredicted RBP17.79■□□□□ 0.44
CCDC43-202ENST00000457422 PWP2Q15269 919 aaKnown RBP17.79■□□□□ 0.44
CCDC43-202ENST00000457422 Q3C1V9 767 aa17.79■□□□□ 0.44
CCDC43-202ENST00000457422 HSDL1Q3SXM5 330 aa17.79■□□□□ 0.44
CCDC43-202ENST00000457422 SCARA3Q6AZY7 606 aa17.79■□□□□ 0.44
CCDC43-202ENST00000457422 LLGL2Q6P1M3 1020 aa17.79■□□□□ 0.44
CCDC43-202ENST00000457422 PHF13Q86YI8 300 aaPredicted RBP17.79■□□□□ 0.44
CCDC43-202ENST00000457422 LRRC71Q8N4P6 559 aa17.79■□□□□ 0.44
CCDC43-202ENST00000457422 RBBP8NLQ8NC74 664 aaPredicted RBP17.79■□□□□ 0.44
CCDC43-202ENST00000457422 OR2W6PQ8NHA6 318 aa17.79■□□□□ 0.44
CCDC43-202ENST00000457422 SLCO2A1Q92959 643 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms