RNA–Protein interactions for RNA: ENST00000457212.5

FAM3A-217, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 5

Gene FAM3A, Length 905 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-217ENST00000457212 MED15Q96RN5 788 aa22.25■■□□□ 1.15
FAM3A-217ENST00000457212 NAT10Q9H0A0 1025 aaKnown RBP22.25■■□□□ 1.15
FAM3A-217ENST00000457212 TTYH1Q9H313 450 aaPredicted RBP22.25■■□□□ 1.15
FAM3A-217ENST00000457212 METTL14Q9HCE5 456 aaKnown RBP22.25■■□□□ 1.15
FAM3A-217ENST00000457212 INTS13Q9NVM9 706 aa22.25■■□□□ 1.15
FAM3A-217ENST00000457212 STK39Q9UEW8 545 aa22.25■■□□□ 1.15
FAM3A-217ENST00000457212 TUBGCP4Q9UGJ1 667 aa22.25■■□□□ 1.15
FAM3A-217ENST00000457212 H3BNC9 293 aa22.24■■□□□ 1.15
FAM3A-217ENST00000457212 TMEM189-UBE2V1I3L0A0 370 aa22.24■■□□□ 1.15
FAM3A-217ENST00000457212 FGF18O76093 207 aa22.24■■□□□ 1.15
FAM3A-217ENST00000457212 TNNC2P02585 160 aa22.24■■□□□ 1.15
FAM3A-217ENST00000457212 TMEM191BP0C7N4 346 aa22.24■■□□□ 1.15
FAM3A-217ENST00000457212 DLATP10515 647 aaKnown RBP22.24■■□□□ 1.15
FAM3A-217ENST00000457212 TNNI1P19237 187 aa22.24■■□□□ 1.15
FAM3A-217ENST00000457212 PBX3P40426 434 aa22.24■■□□□ 1.15
FAM3A-217ENST00000457212 CLCNKBP51801 687 aa22.24■■□□□ 1.15
FAM3A-217ENST00000457212 VAMP7P51809 220 aa22.24■■□□□ 1.15
FAM3A-217ENST00000457212 KRT17Q04695 432 aa22.24■■□□□ 1.15
FAM3A-217ENST00000457212 UPP1Q16831 310 aa22.24■■□□□ 1.15
FAM3A-217ENST00000457212 EEF2KMTQ96G04 330 aa22.24■■□□□ 1.15
FAM3A-217ENST00000457212 BORCS6Q96GS4 357 aa22.24■■□□□ 1.15
FAM3A-217ENST00000457212 IGSF21Q96ID5 467 aa22.24■■□□□ 1.15
FAM3A-217ENST00000457212 SRRTQ9BXP5 876 aaKnown RBP22.24■■□□□ 1.15
FAM3A-217ENST00000457212 CERS4Q9HA82 394 aa22.24■■□□□ 1.15
FAM3A-217ENST00000457212 GOLGA2P5Q9HBQ8 144 aa22.24■■□□□ 1.15
FAM3A-217ENST00000457212 DPP3Q9NY33 737 aa22.24■■□□□ 1.15
FAM3A-217ENST00000457212 PRG3Q9Y2Y8 225 aaPredicted RBP22.24■■□□□ 1.15
FAM3A-217ENST00000457212 NT5C1B-RDH14C9J2C7 533 aa22.23■■□□□ 1.15
FAM3A-217ENST00000457212 PODXLO00592 558 aa22.23■■□□□ 1.15
FAM3A-217ENST00000457212 IKBKBO14920 756 aa22.23■■□□□ 1.15
FAM3A-217ENST00000457212 PAX3P23760 479 aa22.23■■□□□ 1.15
FAM3A-217ENST00000457212 FXR1P51114 621 aaKnown RBP eCLIP22.23■■□□□ 1.15
FAM3A-217ENST00000457212 UBE3AQ05086 875 aa22.23■■□□□ 1.15
FAM3A-217ENST00000457212 BFSP1Q12934 665 aa22.23■■□□□ 1.15
FAM3A-217ENST00000457212 GPM6BQ13491 265 aa22.23■■□□□ 1.15
FAM3A-217ENST00000457212 TPD52L1Q16890 204 aaPredicted RBP22.23■■□□□ 1.15
FAM3A-217ENST00000457212 FRMD5Q7Z6J6 570 aa22.23■■□□□ 1.15
FAM3A-217ENST00000457212 ENOX1Q8TC92 643 aaKnown RBP22.23■■□□□ 1.15
FAM3A-217ENST00000457212 PLEKHO2Q8TD55 490 aa22.23■■□□□ 1.15
FAM3A-217ENST00000457212 PAAF1Q9BRP4 392 aa22.23■■□□□ 1.15
FAM3A-217ENST00000457212 FUCA2Q9BTY2 467 aa22.23■■□□□ 1.15
FAM3A-217ENST00000457212 GZF1Q9H116 711 aaPredicted RBP22.23■■□□□ 1.15
FAM3A-217ENST00000457212 MARCH5Q9NX47 278 aa22.23■■□□□ 1.15
FAM3A-217ENST00000457212 ARMCX3Q9UH62 379 aaPredicted RBP22.23■■□□□ 1.15
FAM3A-217ENST00000457212 LZTS1Q9Y250 596 aa22.23■■□□□ 1.15
FAM3A-217ENST00000457212 LRRIQ3A6PVS8 624 aaPredicted RBP22.22■■□□□ 1.15
FAM3A-217ENST00000457212 B3GAT3O94766 335 aa22.22■■□□□ 1.15
FAM3A-217ENST00000457212 ITGB1P05556 798 aa22.22■■□□□ 1.15
FAM3A-217ENST00000457212 CCDC40Q4G0X9 1142 aa22.22■■□□□ 1.15
FAM3A-217ENST00000457212 C11orf57Q6ZUT1 292 aaPredicted RBP22.22■■□□□ 1.15
FAM3A-217ENST00000457212 TMEM173Q86WV6 379 aaPredicted RBP22.22■■□□□ 1.15
FAM3A-217ENST00000457212 MTMR12Q9C0I1 747 aa22.22■■□□□ 1.15
FAM3A-217ENST00000457212 LMAN2LQ9H0V9 348 aa22.22■■□□□ 1.15
FAM3A-217ENST00000457212 DNAJC25Q9H1X3 360 aa22.22■■□□□ 1.15
FAM3A-217ENST00000457212 PUF60Q9UHX1 559 aaKnown RBP22.22■■□□□ 1.15
FAM3A-217ENST00000457212 ADAM28Q9UKQ2 775 aa22.22■■□□□ 1.15
FAM3A-217ENST00000457212 ITGA11Q9UKX5 1188 aa22.22■■□□□ 1.15
FAM3A-217ENST00000457212 PTPRJQ12913 1337 aa22.22■■□□□ 1.15
FAM3A-217ENST00000457212 ANO9A1A5B4 782 aa22.21■■□□□ 1.15
FAM3A-217ENST00000457212 STX10O60499 249 aa22.21■■□□□ 1.15
FAM3A-217ENST00000457212 TADA2AO75478 443 aa22.21■■□□□ 1.15
FAM3A-217ENST00000457212 KIF4AO95239 1232 aa22.21■■□□□ 1.15
FAM3A-217ENST00000457212 MARSP56192 900 aaKnown RBP22.21■■□□□ 1.15
FAM3A-217ENST00000457212 ANO6Q4KMQ2 910 aa22.21■■□□□ 1.15
FAM3A-217ENST00000457212 C9orf57Q5W0N0 161 aa22.21■■□□□ 1.15
FAM3A-217ENST00000457212 DDX53Q86TM3 631 aaKnown RBP22.21■■□□□ 1.15
FAM3A-217ENST00000457212 OR5B17Q8NGF7 314 aa22.21■■□□□ 1.15
FAM3A-217ENST00000457212 POP1Q99575 1024 aaKnown RBP22.21■■□□□ 1.15
FAM3A-217ENST00000457212 THAP9Q9H5L6 903 aa22.21■■□□□ 1.15
FAM3A-217ENST00000457212 CACNG4Q9UBN1 327 aa22.21■■□□□ 1.15
FAM3A-217ENST00000457212 PIRO00625 290 aa22.2■■□□□ 1.14
FAM3A-217ENST00000457212 GTF2H1P32780 548 aa22.2■■□□□ 1.14
FAM3A-217ENST00000457212 GUCY2FP51841 1108 aa22.2■■□□□ 1.14
FAM3A-217ENST00000457212 DLG4P78352 724 aa22.2■■□□□ 1.14
FAM3A-217ENST00000457212 ELAVL2Q12926 359 aaKnown RBP22.2■■□□□ 1.14
FAM3A-217ENST00000457212 LMBRD2Q68DH5 695 aaPredicted RBP22.2■■□□□ 1.14
FAM3A-217ENST00000457212 TRAPPC11Q7Z392 1133 aa22.2■■□□□ 1.14
FAM3A-217ENST00000457212 FAM114A1Q8IWE2 563 aa22.2■■□□□ 1.14
FAM3A-217ENST00000457212 C1orf127Q8N9H9 656 aa22.2■■□□□ 1.14
FAM3A-217ENST00000457212 SPPL3Q8TCT6 385 aa22.2■■□□□ 1.14
FAM3A-217ENST00000457212 BCL7CQ8WUZ0 217 aaPredicted RBP22.2■■□□□ 1.14
FAM3A-217ENST00000457212 ZNF516Q92618 1163 aa22.2■■□□□ 1.14
FAM3A-217ENST00000457212 RABGGTAQ92696 567 aa22.2■■□□□ 1.14
FAM3A-217ENST00000457212 BPIFA3Q9BQP9 254 aa22.2■■□□□ 1.14
FAM3A-217ENST00000457212 R3HCC1Q9Y3T6 440 aaKnown RBP22.2■■□□□ 1.14
FAM3A-217ENST00000457212 EPOPA6NHQ4 379 aa22.19■■□□□ 1.14
FAM3A-217ENST00000457212 TRAPPC3O43617 180 aa22.19■■□□□ 1.14
FAM3A-217ENST00000457212 CAVIN2O95810 425 aa22.19■■□□□ 1.14
FAM3A-217ENST00000457212 EFEMP2O95967 443 aa22.19■■□□□ 1.14
FAM3A-217ENST00000457212 PNPLA4P41247 253 aa22.19■■□□□ 1.14
FAM3A-217ENST00000457212 RBP5P82980 135 aa22.19■■□□□ 1.14
FAM3A-217ENST00000457212 GRIN2CQ14957 1233 aa22.19■■□□□ 1.14
FAM3A-217ENST00000457212 C1orf220Q5T0J3 134 aa22.19■■□□□ 1.14
FAM3A-217ENST00000457212 FUT10Q6P4F1 479 aa22.19■■□□□ 1.14
FAM3A-217ENST00000457212 LRRC52Q8N7C0 313 aa22.19■■□□□ 1.14
FAM3A-217ENST00000457212 ALG13Q9NP73 1137 aaKnown RBP22.19■■□□□ 1.14
FAM3A-217ENST00000457212 NUB1Q9Y5A7 615 aa22.19■■□□□ 1.14
FAM3A-217ENST00000457212 SF3B1O75533 1304 aaKnown RBP eCLIP22.19■■□□□ 1.143e-6■■■■■ 137.9
FAM3A-217ENST00000457212 CHD7Q9P2D1 2997 aa22.19■■□□□ 1.14
FAM3A-217ENST00000457212 PLXNA4Q9HCM2 1894 aa22.18■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms