RNA–Protein interactions for RNA: ENST00000456090.2

SMCR2-201, Transcript of Smith-Magenis syndrome chromosome region, candidate 2, humanhuman

TSL 2 BASIC

Gene SMCR2, Length 564 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCR2-201ENST00000456090 LONP1P36776 959 aaKnown RBP13.54□□□□□ -0.24
SMCR2-201ENST00000456090 NUBP1P53384 320 aa13.54□□□□□ -0.24
SMCR2-201ENST00000456090 NTHL1P78549 312 aa13.54□□□□□ -0.24
SMCR2-201ENST00000456090 MCL1Q07820 350 aa13.54□□□□□ -0.24
SMCR2-201ENST00000456090 KARSQ15046 597 aaKnown RBP13.54□□□□□ -0.24
SMCR2-201ENST00000456090 SLC10A6Q3KNW5 377 aa13.54□□□□□ -0.24
SMCR2-201ENST00000456090 VARS2Q5ST30 1063 aaKnown RBP13.54□□□□□ -0.24
SMCR2-201ENST00000456090 HAUS6Q7Z4H7 955 aa13.54□□□□□ -0.24
SMCR2-201ENST00000456090 SIX5Q8N196 739 aa13.54□□□□□ -0.24
SMCR2-201ENST00000456090 SLC44A3Q8N4M1 653 aa13.54□□□□□ -0.24
SMCR2-201ENST00000456090 ST13P5Q8NFI4 369 aaPredicted RBP13.54□□□□□ -0.24
SMCR2-201ENST00000456090 NXPE3Q969Y0 559 aa13.54□□□□□ -0.24
SMCR2-201ENST00000456090 HAPLN2Q9GZV7 340 aa13.54□□□□□ -0.24
SMCR2-201ENST00000456090 BLOC1S4Q9NUP1 217 aa13.54□□□□□ -0.24
SMCR2-201ENST00000456090 NUB1Q9Y5A7 615 aa13.54□□□□□ -0.24
SMCR2-201ENST00000456090 BACE2Q9Y5Z0 518 aa13.54□□□□□ -0.24
SMCR2-201ENST00000456090 FRYLO94915 3013 aa13.53□□□□□ -0.24
SMCR2-201ENST00000456090 H0Y858 1186 aa13.53□□□□□ -0.24
SMCR2-201ENST00000456090 K7ENM7 598 aa13.53□□□□□ -0.24
SMCR2-201ENST00000456090 HNRNPDLO14979 420 aaKnown RBP13.53□□□□□ -0.24
SMCR2-201ENST00000456090 GALR2O43603 387 aaPredicted RBP13.53□□□□□ -0.24
SMCR2-201ENST00000456090 FAM13AO94988 1023 aa13.53□□□□□ -0.24
SMCR2-201ENST00000456090 KRT18P05783 430 aaKnown RBP13.53□□□□□ -0.24
SMCR2-201ENST00000456090 CFHP08603 1231 aa13.53□□□□□ -0.24
SMCR2-201ENST00000456090 CXCL8P10145 99 aa13.53□□□□□ -0.24
SMCR2-201ENST00000456090 PDCP20941 246 aa13.53□□□□□ -0.24
SMCR2-201ENST00000456090 RPL9P32969 192 aaKnown RBP13.53□□□□□ -0.24
SMCR2-201ENST00000456090 CLCN5P51795 746 aa13.53□□□□□ -0.24
SMCR2-201ENST00000456090 SPAG1Q07617 926 aa13.53□□□□□ -0.24
SMCR2-201ENST00000456090 MCM6Q14566 821 aa13.53□□□□□ -0.24
SMCR2-201ENST00000456090 UVSSAQ2YD98 709 aa13.53□□□□□ -0.24
SMCR2-201ENST00000456090 CWF19L1Q69YN2 538 aaKnown RBP13.53□□□□□ -0.24
SMCR2-201ENST00000456090 MYCT1Q8N699 235 aa13.53□□□□□ -0.24
SMCR2-201ENST00000456090 RAD54LQ92698 747 aa13.53□□□□□ -0.24
SMCR2-201ENST00000456090 ATOH1Q92858 354 aaPredicted RBP13.53□□□□□ -0.24
SMCR2-201ENST00000456090 ZHX3Q9H4I2 956 aa13.53□□□□□ -0.24
SMCR2-201ENST00000456090 PARVGQ9HBI0 331 aa13.53□□□□□ -0.24
SMCR2-201ENST00000456090 FAM86C1Q9NVL1 165 aa13.53□□□□□ -0.24
SMCR2-201ENST00000456090 HCFC1R1Q9NWW0 138 aa13.53□□□□□ -0.24
SMCR2-201ENST00000456090 TUBGCP4Q9UGJ1 667 aa13.53□□□□□ -0.24
SMCR2-201ENST00000456090 TBX20Q9UMR3 447 aa13.53□□□□□ -0.24
SMCR2-201ENST00000456090 RIF1Q5UIP0 2472 aaKnown RBP13.53□□□□□ -0.24
SMCR2-201ENST00000456090 ANHXE9PGG2 379 aa13.52□□□□□ -0.25
SMCR2-201ENST00000456090 SYN3O14994 580 aa13.52□□□□□ -0.25
SMCR2-201ENST00000456090 CLTAP09496 248 aa13.52□□□□□ -0.25
SMCR2-201ENST00000456090 SRFP11831 508 aa13.52□□□□□ -0.25
SMCR2-201ENST00000456090 NPR3P17342 541 aa13.52□□□□□ -0.25
SMCR2-201ENST00000456090 MCM4P33991 863 aa13.52□□□□□ -0.25
SMCR2-201ENST00000456090 LIG4P49917 911 aa13.52□□□□□ -0.25
SMCR2-201ENST00000456090 ZNF131P52739 623 aa13.52□□□□□ -0.25
SMCR2-201ENST00000456090 ROR1Q01973 937 aa13.52□□□□□ -0.25
SMCR2-201ENST00000456090 HTR4Q13639 388 aa13.52□□□□□ -0.25
SMCR2-201ENST00000456090 SLC8B1Q6J4K2 584 aa13.52□□□□□ -0.25
SMCR2-201ENST00000456090 TMEM130Q8N3G9 435 aa13.52□□□□□ -0.25
SMCR2-201ENST00000456090 ITFG1Q8TB96 612 aa13.52□□□□□ -0.25
SMCR2-201ENST00000456090 LARP4BQ92615 738 aaKnown RBP13.52□□□□□ -0.25
SMCR2-201ENST00000456090 KCNN1Q92952 543 aa13.52□□□□□ -0.25
SMCR2-201ENST00000456090 IRF2BPLQ9H1B7 796 aa13.52□□□□□ -0.25
SMCR2-201ENST00000456090 CDH7Q9ULB5 785 aa13.52□□□□□ -0.25
SMCR2-201ENST00000456090 CA14Q9ULX7 337 aa13.52□□□□□ -0.25
SMCR2-201ENST00000456090 CLIC4Q9Y696 253 aa13.52□□□□□ -0.25
SMCR2-201ENST00000456090 ZFP37Q9Y6Q3 630 aaPredicted RBP13.52□□□□□ -0.25
SMCR2-201ENST00000456090 NUMBLQ9Y6R0 609 aa13.52□□□□□ -0.25
SMCR2-201ENST00000456090 TSC2P49815 1807 aa13.52□□□□□ -0.25
SMCR2-201ENST00000456090 CACNA1IQ9P0X4 2223 aa13.51□□□□□ -0.25
SMCR2-201ENST00000456090 TTC26A0AVF1 554 aa13.51□□□□□ -0.25
SMCR2-201ENST00000456090 WDR27A2RRH5 827 aa13.51□□□□□ -0.25
SMCR2-201ENST00000456090 KRBA1A5PL33 1030 aa13.51□□□□□ -0.25
SMCR2-201ENST00000456090 H7C4K7 107 aa13.51□□□□□ -0.25
SMCR2-201ENST00000456090 TRAK2O60296 914 aa13.51□□□□□ -0.25
SMCR2-201ENST00000456090 TBCAO75347 108 aaKnown RBP13.51□□□□□ -0.25
SMCR2-201ENST00000456090 POU2F2P09086 479 aa13.51□□□□□ -0.25
SMCR2-201ENST00000456090 AOC1P19801 751 aa13.51□□□□□ -0.25
SMCR2-201ENST00000456090 MARCKSP29966 332 aaPredicted RBP13.51□□□□□ -0.25
SMCR2-201ENST00000456090 TNFSF9P41273 254 aa13.51□□□□□ -0.25
SMCR2-201ENST00000456090 ARPP19P56211 112 aa13.51□□□□□ -0.25
SMCR2-201ENST00000456090 PPP2R3AQ06190 1150 aa13.51□□□□□ -0.25
SMCR2-201ENST00000456090 PABPC1LQ4VXU2 614 aaKnown RBP13.51□□□□□ -0.25
SMCR2-201ENST00000456090 SPECC1Q5M775 1068 aa13.51□□□□□ -0.25
SMCR2-201ENST00000456090 ZBTB41Q5SVQ8 909 aa13.51□□□□□ -0.25
SMCR2-201ENST00000456090 PARM1Q6UWI2 310 aa13.51□□□□□ -0.25
SMCR2-201ENST00000456090 RTL10Q7L3V2 364 aa13.51□□□□□ -0.25
SMCR2-201ENST00000456090 ZNF461Q8TAF7 563 aa13.51□□□□□ -0.25
SMCR2-201ENST00000456090 GPR152Q8TDT2 470 aa13.51□□□□□ -0.25
SMCR2-201ENST00000456090 FGF13Q92913 245 aa13.51□□□□□ -0.25
SMCR2-201ENST00000456090 FGF14Q92915 247 aa13.51□□□□□ -0.25
SMCR2-201ENST00000456090 KIF12Q96FN5 646 aa13.51□□□□□ -0.25
SMCR2-201ENST00000456090 EPSTI1Q96J88 318 aa13.51□□□□□ -0.25
SMCR2-201ENST00000456090 SUSD3Q96L08 255 aa13.51□□□□□ -0.25
SMCR2-201ENST00000456090 CCSER1Q9C0I3 900 aa13.51□□□□□ -0.25
SMCR2-201ENST00000456090 PLEKHA5Q9HAU0 1116 aa13.51□□□□□ -0.25
SMCR2-201ENST00000456090 DNMT3BQ9UBC3 853 aaKnown RBP13.51□□□□□ -0.25
SMCR2-201ENST00000456090 WNT16Q9UBV4 365 aa13.51□□□□□ -0.25
SMCR2-201ENST00000456090 FAM186AA6NE01 2351 aa13.5□□□□□ -0.25
SMCR2-201ENST00000456090 PTPRZ1P23471 2315 aaPredicted RBP13.5□□□□□ -0.25
SMCR2-201ENST00000456090 STK25O00506 426 aa13.5□□□□□ -0.25
SMCR2-201ENST00000456090 PRRG1O14668 218 aa13.5□□□□□ -0.25
SMCR2-201ENST00000456090 PI15O43692 258 aa13.5□□□□□ -0.25
SMCR2-201ENST00000456090 FAM189A1O60320 539 aa13.5□□□□□ -0.25
SMCR2-201ENST00000456090 TBC1D4O60343 1298 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms