RNA–Protein interactions for RNA: ENST00000454542.5

HDAC4-205, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-205ENST00000454542 TJAP1Q5JTD0 557 aa15.4■□□□□ 0.06
HDAC4-205ENST00000454542 RTP2Q5QGT7 225 aa15.4■□□□□ 0.06
HDAC4-205ENST00000454542 SPATA1Q5VX52 437 aa15.4■□□□□ 0.06
HDAC4-205ENST00000454542 JADE1Q6IE81 842 aa15.4■□□□□ 0.06
HDAC4-205ENST00000454542 ARMCX5Q6P1M9 558 aa15.4■□□□□ 0.06
HDAC4-205ENST00000454542 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.4■□□□□ 0.06
HDAC4-205ENST00000454542 CLEC17AQ6ZS10 378 aa15.4■□□□□ 0.06
HDAC4-205ENST00000454542 EFCAB13Q8IY85 973 aa15.4■□□□□ 0.06
HDAC4-205ENST00000454542 ELOA2Q8IYF1 753 aaPredicted RBP15.4■□□□□ 0.06
HDAC4-205ENST00000454542 SPATA20Q8TB22 786 aa15.4■□□□□ 0.06
HDAC4-205ENST00000454542 HASPINQ8TF76 798 aa15.4■□□□□ 0.06
HDAC4-205ENST00000454542 PIK3R5Q8WYR1 880 aa15.4■□□□□ 0.06
HDAC4-205ENST00000454542 SAAL1Q96ER3 474 aa15.4■□□□□ 0.06
HDAC4-205ENST00000454542 KIF12Q96FN5 646 aa15.4■□□□□ 0.06
HDAC4-205ENST00000454542 CGNQ9P2M7 1197 aaKnown RBP15.4■□□□□ 0.06
HDAC4-205ENST00000454542 SSX2IPQ9Y2D8 614 aa15.4■□□□□ 0.06
HDAC4-205ENST00000454542 HCFC2Q9Y5Z7 792 aa15.4■□□□□ 0.06
HDAC4-205ENST00000454542 GOLGA6L4A6NEF3 574 aa15.39■□□□□ 0.05
HDAC4-205ENST00000454542 XPOTO43592 962 aaKnown RBP15.39■□□□□ 0.05
HDAC4-205ENST00000454542 GADD45BO75293 160 aaPredicted RBP15.39■□□□□ 0.05
HDAC4-205ENST00000454542 TADA2AO75478 443 aa15.39■□□□□ 0.05
HDAC4-205ENST00000454542 B3GAT3O94766 335 aa15.39■□□□□ 0.05
HDAC4-205ENST00000454542 IL18RAPO95256 599 aa15.39■□□□□ 0.05
HDAC4-205ENST00000454542 CXCL14O95715 111 aa15.39■□□□□ 0.05
HDAC4-205ENST00000454542 CNPP09543 421 aaKnown RBP15.39■□□□□ 0.05
HDAC4-205ENST00000454542 FGFR3P22607 806 aa15.39■□□□□ 0.05
HDAC4-205ENST00000454542 RBM10P98175 930 aaKnown RBP15.39■□□□□ 0.05
HDAC4-205ENST00000454542 SPAG1Q07617 926 aa15.39■□□□□ 0.05
HDAC4-205ENST00000454542 AAK1Q2M2I8 961 aa15.39■□□□□ 0.05
HDAC4-205ENST00000454542 RBM23Q86U06 439 aaKnown RBP15.39■□□□□ 0.05
HDAC4-205ENST00000454542 NT5DC4Q86YG4 428 aa15.39■□□□□ 0.05
HDAC4-205ENST00000454542 GPD1LQ8N335 351 aa15.39■□□□□ 0.05
HDAC4-205ENST00000454542 TMEM130Q8N3G9 435 aa15.39■□□□□ 0.05
HDAC4-205ENST00000454542 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.39■□□□□ 0.05
HDAC4-205ENST00000454542 SLC22A17Q8WUG5 538 aa15.39■□□□□ 0.05
HDAC4-205ENST00000454542 KLHL5Q96PQ7 755 aa15.39■□□□□ 0.05
HDAC4-205ENST00000454542 KCTD10Q9H3F6 313 aa15.39■□□□□ 0.05
HDAC4-205ENST00000454542 IGFLR1Q9H665 355 aa15.39■□□□□ 0.05
HDAC4-205ENST00000454542 TSHZ2Q9NRE2 1034 aa15.39■□□□□ 0.05
HDAC4-205ENST00000454542 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.39■□□□□ 0.05
HDAC4-205ENST00000454542 MRPL17Q9NRX2 175 aaKnown RBP15.39■□□□□ 0.05
HDAC4-205ENST00000454542 HSPBP1Q9NZL4 362 aa15.39■□□□□ 0.05
HDAC4-205ENST00000454542 FNIP2Q9P278 1114 aa15.39■□□□□ 0.05
HDAC4-205ENST00000454542 DENND4AQ7Z401 1863 aa15.39■□□□□ 0.05
HDAC4-205ENST00000454542 C1RP00736 705 aa15.38■□□□□ 0.05
HDAC4-205ENST00000454542 KCNQ1P51787 676 aa15.38■□□□□ 0.05
HDAC4-205ENST00000454542 CREMQ03060 361 aa15.38■□□□□ 0.05
HDAC4-205ENST00000454542 PNOCQ13519 176 aa15.38■□□□□ 0.05
HDAC4-205ENST00000454542 TMEM132DQ14C87 1099 aa15.38■□□□□ 0.05
HDAC4-205ENST00000454542 KNOP1Q1ED39 458 aaKnown RBP15.38■□□□□ 0.05
HDAC4-205ENST00000454542 NELFCDQ8IXH7 590 aa15.38■□□□□ 0.05
HDAC4-205ENST00000454542 SMRP1Q8NCR6 262 aa15.38■□□□□ 0.05
HDAC4-205ENST00000454542 CASP10Q92851 521 aa15.38■□□□□ 0.05
HDAC4-205ENST00000454542 CCDC34Q96HJ3 373 aa15.38■□□□□ 0.05
HDAC4-205ENST00000454542 B3GALT6Q96L58 329 aa15.38■□□□□ 0.05
HDAC4-205ENST00000454542 FAM213AQ9BRX8 229 aa15.38■□□□□ 0.05
HDAC4-205ENST00000454542 TTPALQ9BTX7 342 aa15.38■□□□□ 0.05
HDAC4-205ENST00000454542 EMILIN2Q9BXX0 1053 aa15.38■□□□□ 0.05
HDAC4-205ENST00000454542 RBAKQ9NYW8 714 aaPredicted RBP15.38■□□□□ 0.05
HDAC4-205ENST00000454542 BARX2Q9UMQ3 279 aaPredicted RBP15.38■□□□□ 0.05
HDAC4-205ENST00000454542 ANO9A1A5B4 782 aa15.37■□□□□ 0.05
HDAC4-205ENST00000454542 H3BQ06 376 aaPredicted RBP15.37■□□□□ 0.05
HDAC4-205ENST00000454542 SYN3O14994 580 aa15.37■□□□□ 0.05
HDAC4-205ENST00000454542 TEX28O15482 410 aa15.37■□□□□ 0.05
HDAC4-205ENST00000454542 PAPLNO95428 1278 aa15.37■□□□□ 0.05
HDAC4-205ENST00000454542 BMP1P13497 986 aa15.37■□□□□ 0.05
HDAC4-205ENST00000454542 BRCC3P46736 316 aa15.37■□□□□ 0.05
HDAC4-205ENST00000454542 NDUFV1P49821 464 aa15.37■□□□□ 0.05
HDAC4-205ENST00000454542 CLCN4P51793 760 aa15.37■□□□□ 0.05
HDAC4-205ENST00000454542 GUCY2FP51841 1108 aa15.37■□□□□ 0.05
HDAC4-205ENST00000454542 SMAD4Q13485 552 aaKnown RBP15.37■□□□□ 0.05
HDAC4-205ENST00000454542 PUS10Q3MIT2 529 aaKnown RBP15.37■□□□□ 0.05
HDAC4-205ENST00000454542 TPRNQ4KMQ1 711 aa15.37■□□□□ 0.05
HDAC4-205ENST00000454542 COBLL1Q53SF7 1204 aa15.37■□□□□ 0.05
HDAC4-205ENST00000454542 FAM171A1Q5VUB5 890 aa15.37■□□□□ 0.05
HDAC4-205ENST00000454542 HS2ST1Q7LGA3 356 aa15.37■□□□□ 0.05
HDAC4-205ENST00000454542 PPFIBP1Q86W92 1011 aa15.37■□□□□ 0.05
HDAC4-205ENST00000454542 SLC9A9Q8IVB4 645 aa15.37■□□□□ 0.05
HDAC4-205ENST00000454542 BEST2Q8NFU1 509 aa15.37■□□□□ 0.05
HDAC4-205ENST00000454542 GOLGA5Q8TBA6 731 aa15.37■□□□□ 0.05
HDAC4-205ENST00000454542 LNX1Q8TBB1 728 aaPredicted RBP15.37■□□□□ 0.05
HDAC4-205ENST00000454542 SUSD3Q96L08 255 aa15.37■□□□□ 0.05
HDAC4-205ENST00000454542 PCIF1Q9H4Z3 704 aa15.37■□□□□ 0.05
HDAC4-205ENST00000454542 KIAA1586Q9HCI6 787 aa15.37■□□□□ 0.05
HDAC4-205ENST00000454542 SCN1AP35498 2009 aa15.36■□□□□ 0.05
HDAC4-205ENST00000454542 GOLGA8IPA6NC78 632 aa15.36■□□□□ 0.05
HDAC4-205ENST00000454542 GOLGA8JA6NMD2 632 aa15.36■□□□□ 0.05
HDAC4-205ENST00000454542 PIRO00625 290 aa15.36■□□□□ 0.05
HDAC4-205ENST00000454542 PPEF2O14830 753 aa15.36■□□□□ 0.05
HDAC4-205ENST00000454542 TRAPPC3O43617 180 aa15.36■□□□□ 0.05
HDAC4-205ENST00000454542 ADH1AP07327 375 aa15.36■□□□□ 0.05
HDAC4-205ENST00000454542 SRGAP2BP0DMP2 458 aa15.36■□□□□ 0.05
HDAC4-205ENST00000454542 TKTP29401 623 aaKnown RBP15.36■□□□□ 0.05
HDAC4-205ENST00000454542 UBE2HP62256 183 aa15.36■□□□□ 0.05
HDAC4-205ENST00000454542 NFIL3Q16649 462 aa15.36■□□□□ 0.05
HDAC4-205ENST00000454542 ZCWPW2Q504Y3 356 aa15.36■□□□□ 0.05
HDAC4-205ENST00000454542 C9orf57Q5W0N0 161 aa15.36■□□□□ 0.05
HDAC4-205ENST00000454542 ANKRD54Q6NXT1 300 aa15.36■□□□□ 0.05
HDAC4-205ENST00000454542 PDXDC1Q6P996 788 aa15.36■□□□□ 0.05
HDAC4-205ENST00000454542 SYCE2Q6PIF2 218 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms