RNA–Protein interactions for RNA: ENST00000453854.1

HMGB1P15-201, Transcript of high mobility group box 1 pseudogene 15, humanhuman

BASIC

Gene HMGB1P15, Length 435 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P15-201ENST00000453854 PDZD4Q76G19 769 aaPredicted RBP4.62□□□□□ -1.67
HMGB1P15-201ENST00000453854 PPP1R3BQ86XI6 285 aa4.62□□□□□ -1.67
HMGB1P15-201ENST00000453854 ZNF761Q86XN6 746 aaPredicted RBP4.62□□□□□ -1.67
HMGB1P15-201ENST00000453854 CMTM4Q8IZR5 234 aa4.62□□□□□ -1.67
HMGB1P15-201ENST00000453854 ANKRD53Q8N9V6 530 aa4.62□□□□□ -1.67
HMGB1P15-201ENST00000453854 SYT8Q8NBV8 401 aa4.62□□□□□ -1.67
HMGB1P15-201ENST00000453854 ACRBPQ8NEB7 543 aa4.62□□□□□ -1.67
HMGB1P15-201ENST00000453854 FEZF2Q8TBJ5 459 aa4.62□□□□□ -1.67
HMGB1P15-201ENST00000453854 CFHR4Q92496 578 aa4.62□□□□□ -1.67
HMGB1P15-201ENST00000453854 RABGGTAQ92696 567 aa4.62□□□□□ -1.67
HMGB1P15-201ENST00000453854 RIPOR3Q96MK2 946 aa4.62□□□□□ -1.67
HMGB1P15-201ENST00000453854 GPHA2Q96T91 129 aa4.62□□□□□ -1.67
HMGB1P15-201ENST00000453854 SELENOOQ9BVL4 669 aa4.62□□□□□ -1.67
HMGB1P15-201ENST00000453854 DPH1Q9BZG8 443 aa4.62□□□□□ -1.67
HMGB1P15-201ENST00000453854 UNKQ9C0B0 810 aaKnown RBP4.62□□□□□ -1.67
HMGB1P15-201ENST00000453854 KCNH6Q9H252 994 aa4.62□□□□□ -1.67
HMGB1P15-201ENST00000453854 KIAA1586Q9HCI6 787 aa4.62□□□□□ -1.67
HMGB1P15-201ENST00000453854 TRMT13Q9NUP7 481 aaKnown RBP4.62□□□□□ -1.67
HMGB1P15-201ENST00000453854 STAP2Q9UGK3 403 aa4.62□□□□□ -1.67
HMGB1P15-201ENST00000453854 FAM184BQ9ULE4 1060 aa4.62□□□□□ -1.67
HMGB1P15-201ENST00000453854 ACTL7AQ9Y615 435 aa4.62□□□□□ -1.67
HMGB1P15-201ENST00000453854 BAZ1AQ9NRL2 1556 aaPredicted RBP4.61□□□□□ -1.67
HMGB1P15-201ENST00000453854 CCDC189A1A4V9 331 aa4.61□□□□□ -1.67
HMGB1P15-201ENST00000453854 TBX3O15119 743 aa4.61□□□□□ -1.67
HMGB1P15-201ENST00000453854 ARHGAP6O43182 974 aa4.61□□□□□ -1.67
HMGB1P15-201ENST00000453854 TCEA3O75764 348 aa4.61□□□□□ -1.67
HMGB1P15-201ENST00000453854 PTPN7P35236 360 aa4.61□□□□□ -1.67
HMGB1P15-201ENST00000453854 FLT3LGP49771 235 aa4.61□□□□□ -1.67
HMGB1P15-201ENST00000453854 RRADP55042 308 aa4.61□□□□□ -1.67
HMGB1P15-201ENST00000453854 KRTAP10-2P60368 255 aa4.61□□□□□ -1.67
HMGB1P15-201ENST00000453854 MFSD14BQ5SR56 506 aa4.61□□□□□ -1.67
HMGB1P15-201ENST00000453854 SEM1Q6ZVN7 128 aa4.61□□□□□ -1.67
HMGB1P15-201ENST00000453854 GPR155Q7Z3F1 870 aa4.61□□□□□ -1.67
HMGB1P15-201ENST00000453854 FRMD5Q7Z6J6 570 aa4.61□□□□□ -1.67
HMGB1P15-201ENST00000453854 ADGRE4PQ86SQ3 457 aa4.61□□□□□ -1.67
HMGB1P15-201ENST00000453854 TMEM151BQ8IW70 566 aa4.61□□□□□ -1.67
HMGB1P15-201ENST00000453854 SH2D3CQ8N5H7 860 aa4.61□□□□□ -1.67
HMGB1P15-201ENST00000453854 CELF5Q8N6W0 485 aaKnown RBP4.61□□□□□ -1.67
HMGB1P15-201ENST00000453854 RNF152Q8N8N0 203 aa4.61□□□□□ -1.67
HMGB1P15-201ENST00000453854 TP53I13Q8NBR0 393 aaPredicted RBP4.61□□□□□ -1.67
HMGB1P15-201ENST00000453854 IL17RDQ8NFM7 739 aa4.61□□□□□ -1.67
HMGB1P15-201ENST00000453854 MDM1Q8TC05 714 aa4.61□□□□□ -1.67
HMGB1P15-201ENST00000453854 KBTBD7Q8WVZ9 684 aa4.61□□□□□ -1.67
HMGB1P15-201ENST00000453854 STON2Q8WXE9 905 aa4.61□□□□□ -1.67
HMGB1P15-201ENST00000453854 BRI3BPQ8WY22 251 aa4.61□□□□□ -1.67
HMGB1P15-201ENST00000453854 CEP95Q96GE4 821 aa4.61□□□□□ -1.67
HMGB1P15-201ENST00000453854 SUCLG2Q96I99 432 aa4.61□□□□□ -1.67
HMGB1P15-201ENST00000453854 LCORQ96JN0 433 aaPredicted RBP4.61□□□□□ -1.67
HMGB1P15-201ENST00000453854 CDC5LQ99459 802 aaKnown RBP4.61□□□□□ -1.67
HMGB1P15-201ENST00000453854 COLEC11Q9BWP8 271 aa4.61□□□□□ -1.67
HMGB1P15-201ENST00000453854 TRIM54Q9BYV2 358 aa4.61□□□□□ -1.67
HMGB1P15-201ENST00000453854 MSL2Q9HCI7 577 aa4.61□□□□□ -1.67
HMGB1P15-201ENST00000453854 SARS2Q9NP81 518 aaKnown RBP4.61□□□□□ -1.67
HMGB1P15-201ENST00000453854 STARD7Q9NQZ5 370 aa4.61□□□□□ -1.67
HMGB1P15-201ENST00000453854 PIH1D1Q9NWS0 290 aaKnown RBP4.61□□□□□ -1.67
HMGB1P15-201ENST00000453854 MOCS1Q9NZB8 636 aa4.61□□□□□ -1.67
HMGB1P15-201ENST00000453854 FAM30AQ9NZY2 134 aa4.61□□□□□ -1.67
HMGB1P15-201ENST00000453854 SWAP70Q9UH65 585 aa4.61□□□□□ -1.67
HMGB1P15-201ENST00000453854 SLC23A1Q9UHI7 598 aa4.61□□□□□ -1.67
HMGB1P15-201ENST00000453854 ANAPC4Q9UJX5 808 aa4.61□□□□□ -1.67
HMGB1P15-201ENST00000453854 PADI4Q9UM07 663 aa4.61□□□□□ -1.67
HMGB1P15-201ENST00000453854 ADAMTS20P59510 1910 aa4.6□□□□□ -1.67
HMGB1P15-201ENST00000453854 PRSS29PA6NIE9 313 aa4.6□□□□□ -1.67
HMGB1P15-201ENST00000453854 MATN2O00339 956 aa4.6□□□□□ -1.67
HMGB1P15-201ENST00000453854 KPNA5O15131 536 aa4.6□□□□□ -1.67
HMGB1P15-201ENST00000453854 MATN4O95460 622 aa4.6□□□□□ -1.67
HMGB1P15-201ENST00000453854 KITP10721 976 aa4.6□□□□□ -1.67
HMGB1P15-201ENST00000453854 TSHRP16473 764 aa4.6□□□□□ -1.67
HMGB1P15-201ENST00000453854 TYRP1P17643 537 aa4.6□□□□□ -1.67
HMGB1P15-201ENST00000453854 TNFSF4P23510 183 aa4.6□□□□□ -1.67
HMGB1P15-201ENST00000453854 SLC7A1P30825 629 aa4.6□□□□□ -1.67
HMGB1P15-201ENST00000453854 CASRP41180 1078 aa4.6□□□□□ -1.67
HMGB1P15-201ENST00000453854 ALDH1A3P47895 512 aa4.6□□□□□ -1.67
HMGB1P15-201ENST00000453854 POU5F1BQ06416 359 aa4.6□□□□□ -1.67
HMGB1P15-201ENST00000453854 CHAF1AQ13111 956 aaPredicted RBP4.6□□□□□ -1.67
HMGB1P15-201ENST00000453854 MRPL49Q13405 166 aaKnown RBP4.6□□□□□ -1.67
HMGB1P15-201ENST00000453854 ACAP1Q15027 740 aa4.6□□□□□ -1.67
HMGB1P15-201ENST00000453854 RNF151Q2KHN1 245 aa4.6□□□□□ -1.67
HMGB1P15-201ENST00000453854 PABPC1LQ4VXU2 614 aaKnown RBP4.6□□□□□ -1.67
HMGB1P15-201ENST00000453854 INO80DQ53TQ3 878 aaPredicted RBP4.6□□□□□ -1.67
HMGB1P15-201ENST00000453854 KHDC1LQ5JSQ8 128 aa4.6□□□□□ -1.67
HMGB1P15-201ENST00000453854 IZUMO3Q5VZ72 239 aa4.6□□□□□ -1.67
HMGB1P15-201ENST00000453854 AFMIDQ63HM1 303 aa4.6□□□□□ -1.67
HMGB1P15-201ENST00000453854 C1orf228Q6PIY5 440 aa4.6□□□□□ -1.67
HMGB1P15-201ENST00000453854 RALYLQ86SE5 291 aaKnown RBP4.6□□□□□ -1.67
HMGB1P15-201ENST00000453854 SESTD1Q86VW0 696 aa4.6□□□□□ -1.67
HMGB1P15-201ENST00000453854 TMTC2Q8N394 836 aa4.6□□□□□ -1.67
HMGB1P15-201ENST00000453854 LINC01356Q8N9X3 169 aa4.6□□□□□ -1.67
HMGB1P15-201ENST00000453854 OR10H5Q8NGA6 315 aa4.6□□□□□ -1.67
HMGB1P15-201ENST00000453854 OR14K1Q8NGZ2 314 aa4.6□□□□□ -1.67
HMGB1P15-201ENST00000453854 BRIX1Q8TDN6 353 aaKnown RBP4.6□□□□□ -1.67
HMGB1P15-201ENST00000453854 PPM1EQ8WY54 764 aa4.6□□□□□ -1.67
HMGB1P15-201ENST00000453854 BORCS6Q96GS4 357 aa4.6□□□□□ -1.67
HMGB1P15-201ENST00000453854 RPL10LQ96L21 214 aaKnown RBP4.6□□□□□ -1.67
HMGB1P15-201ENST00000453854 WDR12Q9GZL7 423 aaKnown RBP4.6□□□□□ -1.67
HMGB1P15-201ENST00000453854 C11orf54Q9H0W9 315 aaPredicted RBP4.6□□□□□ -1.67
HMGB1P15-201ENST00000453854 ZNF287Q9HBT7 754 aa4.6□□□□□ -1.67
HMGB1P15-201ENST00000453854 STK32BQ9NY57 414 aa4.6□□□□□ -1.67
HMGB1P15-201ENST00000453854 CAMSAP3Q9P1Y5 1249 aaPredicted RBP4.6□□□□□ -1.67
HMGB1P15-201ENST00000453854 ZDHHC8Q9ULC8 765 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms