RNA–Protein interactions for RNA: ENST00000452483.1

HMGB3P21-201, Transcript of high mobility group box 3 pseudogene 21, humanhuman

BASIC

Gene HMGB3P21, Length 547 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P21-201ENST00000452483 CHD1LQ86WJ1 897 aa4.89□□□□□ -1.63
HMGB3P21-201ENST00000452483 CEP97Q8IW35 865 aa4.89□□□□□ -1.63
HMGB3P21-201ENST00000452483 LRRC71Q8N4P6 559 aa4.89□□□□□ -1.63
HMGB3P21-201ENST00000452483 ARHGEF39Q8N4T4 335 aa4.89□□□□□ -1.63
HMGB3P21-201ENST00000452483 CISD2Q8N5K1 135 aaKnown RBP4.89□□□□□ -1.63
HMGB3P21-201ENST00000452483 TMCO5AQ8N6Q1 288 aa4.89□□□□□ -1.63
HMGB3P21-201ENST00000452483 ZNF610Q8N9Z0 462 aa4.89□□□□□ -1.63
HMGB3P21-201ENST00000452483 KLHDC4Q8TBB5 520 aa4.89□□□□□ -1.63
HMGB3P21-201ENST00000452483 PPP1R13LQ8WUF5 828 aa4.89□□□□□ -1.63
HMGB3P21-201ENST00000452483 RIN2Q8WYP3 895 aaPredicted RBP4.89□□□□□ -1.63
HMGB3P21-201ENST00000452483 ST8SIA4Q92187 359 aa4.89□□□□□ -1.63
HMGB3P21-201ENST00000452483 RILPL2Q969X0 211 aa4.89□□□□□ -1.63
HMGB3P21-201ENST00000452483 NSUN4Q96CB9 384 aaKnown RBP4.89□□□□□ -1.63
HMGB3P21-201ENST00000452483 C18orf8Q96DM3 657 aa4.89□□□□□ -1.63
HMGB3P21-201ENST00000452483 UROC1Q96N76 676 aa4.89□□□□□ -1.63
HMGB3P21-201ENST00000452483 PAIP2Q9BPZ3 127 aaKnown RBP4.89□□□□□ -1.63
HMGB3P21-201ENST00000452483 ZFYVE21Q9BQ24 234 aa4.89□□□□□ -1.63
HMGB3P21-201ENST00000452483 HEPHQ9BQS7 1158 aa4.89□□□□□ -1.63
HMGB3P21-201ENST00000452483 PHF20Q9BVI0 1012 aa4.89□□□□□ -1.63
HMGB3P21-201ENST00000452483 COLEC11Q9BWP8 271 aa4.89□□□□□ -1.63
HMGB3P21-201ENST00000452483 AGXT2Q9BYV1 514 aa4.89□□□□□ -1.63
HMGB3P21-201ENST00000452483 EDEM3Q9BZQ6 932 aa4.89□□□□□ -1.63
HMGB3P21-201ENST00000452483 TRIM5Q9C035 493 aa4.89□□□□□ -1.63
HMGB3P21-201ENST00000452483 NKX2-4Q9H2Z4 354 aa4.89□□□□□ -1.63
HMGB3P21-201ENST00000452483 RMI1Q9H9A7 625 aa4.89□□□□□ -1.63
HMGB3P21-201ENST00000452483 RC3H2Q9HBD1 1191 aaKnown RBP4.89□□□□□ -1.63
HMGB3P21-201ENST00000452483 SEMA3GQ9NS98 782 aa4.89□□□□□ -1.63
HMGB3P21-201ENST00000452483 MBNL3Q9NUK0 354 aaKnown RBP4.89□□□□□ -1.63
HMGB3P21-201ENST00000452483 DUSP12Q9UNI6 340 aa4.89□□□□□ -1.63
HMGB3P21-201ENST00000452483 SNX8Q9Y5X2 465 aa4.89□□□□□ -1.63
HMGB3P21-201ENST00000452483 ATP23Q9Y6H3 246 aa4.89□□□□□ -1.63
HMGB3P21-201ENST00000452483 FLT1P17948 1338 aa4.89□□□□□ -1.63
HMGB3P21-201ENST00000452483 FAM25EA8MYX2 175 aa4.88□□□□□ -1.63
HMGB3P21-201ENST00000452483 MUSKO15146 869 aa4.88□□□□□ -1.63
HMGB3P21-201ENST00000452483 MTSS1O43312 755 aa4.88□□□□□ -1.63
HMGB3P21-201ENST00000452483 PAX4O43316 350 aa4.88□□□□□ -1.63
HMGB3P21-201ENST00000452483 TSPAN3O60637 253 aa4.88□□□□□ -1.63
HMGB3P21-201ENST00000452483 PTP4A3O75365 173 aa4.88□□□□□ -1.63
HMGB3P21-201ENST00000452483 SLU7O95391 586 aaKnown RBP4.88□□□□□ -1.63
HMGB3P21-201ENST00000452483 ALAS1P13196 640 aa4.88□□□□□ -1.63
HMGB3P21-201ENST00000452483 ITGB5P18084 799 aa4.88□□□□□ -1.63
HMGB3P21-201ENST00000452483 PAMP19021 973 aa4.88□□□□□ -1.63
HMGB3P21-201ENST00000452483 HDCP19113 662 aa4.88□□□□□ -1.63
HMGB3P21-201ENST00000452483 SLC9A1P19634 815 aa4.88□□□□□ -1.63
HMGB3P21-201ENST00000452483 IL11P20809 199 aa4.88□□□□□ -1.63
HMGB3P21-201ENST00000452483 IL4RP24394 825 aa4.88□□□□□ -1.63
HMGB3P21-201ENST00000452483 CTSSP25774 331 aa4.88□□□□□ -1.63
HMGB3P21-201ENST00000452483 MTNR1BP49286 362 aa4.88□□□□□ -1.63
HMGB3P21-201ENST00000452483 ST5P78524 1137 aa4.88□□□□□ -1.63
HMGB3P21-201ENST00000452483 IL1RL1Q01638 556 aa4.88□□□□□ -1.63
HMGB3P21-201ENST00000452483 MAP2K1Q02750 393 aaPredicted RBP4.88□□□□□ -1.63
HMGB3P21-201ENST00000452483 UBE3AQ05086 875 aa4.88□□□□□ -1.63
HMGB3P21-201ENST00000452483 ZP2Q05996 745 aa4.88□□□□□ -1.63
HMGB3P21-201ENST00000452483 PRPF4BQ13523 1007 aaKnown RBP4.88□□□□□ -1.63
HMGB3P21-201ENST00000452483 PAN2Q504Q3 1202 aaKnown RBP4.88□□□□□ -1.63
HMGB3P21-201ENST00000452483 MUM1L1Q5H9M0 696 aa4.88□□□□□ -1.63
HMGB3P21-201ENST00000452483 CIAPIN1Q6FI81 312 aa4.88□□□□□ -1.63
HMGB3P21-201ENST00000452483 ACAD10Q6JQN1 1059 aa4.88□□□□□ -1.63
HMGB3P21-201ENST00000452483 NAA16Q6N069 864 aaPredicted RBP4.88□□□□□ -1.63
HMGB3P21-201ENST00000452483 SLC23A3Q6PIS1 610 aa4.88□□□□□ -1.63
HMGB3P21-201ENST00000452483 IL27RAQ6UWB1 636 aa4.88□□□□□ -1.63
HMGB3P21-201ENST00000452483 FRMD7Q6ZUT3 714 aa4.88□□□□□ -1.63
HMGB3P21-201ENST00000452483 OVCH1Q7RTY7 1134 aa4.88□□□□□ -1.63
HMGB3P21-201ENST00000452483 TBC1D21Q8IYX1 336 aa4.88□□□□□ -1.63
HMGB3P21-201ENST00000452483 NGEFQ8N5V2 710 aa4.88□□□□□ -1.63
HMGB3P21-201ENST00000452483 RNF152Q8N8N0 203 aa4.88□□□□□ -1.63
HMGB3P21-201ENST00000452483 MOSPD2Q8NHP6 518 aa4.88□□□□□ -1.63
HMGB3P21-201ENST00000452483 PCDH19Q8TAB3 1148 aa4.88□□□□□ -1.63
HMGB3P21-201ENST00000452483 PUM2Q8TB72 1066 aaKnown RBP eCLIP4.88□□□□□ -1.63
HMGB3P21-201ENST00000452483 PIWIL2Q8TC59 973 aaKnown RBP4.88□□□□□ -1.63
HMGB3P21-201ENST00000452483 SPPL3Q8TCT6 385 aa4.88□□□□□ -1.63
HMGB3P21-201ENST00000452483 BICD2Q8TD16 824 aa4.88□□□□□ -1.63
HMGB3P21-201ENST00000452483 RNF141Q8WVD5 230 aa4.88□□□□□ -1.63
HMGB3P21-201ENST00000452483 SYAP1Q96A49 352 aaPredicted RBP4.88□□□□□ -1.63
HMGB3P21-201ENST00000452483 C1orf159Q96HA4 380 aa4.88□□□□□ -1.63
HMGB3P21-201ENST00000452483 Q96M66 194 aa4.88□□□□□ -1.63
HMGB3P21-201ENST00000452483 FNBP1Q96RU3 617 aa4.88□□□□□ -1.63
HMGB3P21-201ENST00000452483 ORAI2Q96SN7 254 aa4.88□□□□□ -1.63
HMGB3P21-201ENST00000452483 SLX1AQ9BQ83 275 aa4.88□□□□□ -1.63
HMGB3P21-201ENST00000452483 ATP13A1Q9HD20 1204 aa4.88□□□□□ -1.63
HMGB3P21-201ENST00000452483 PRDM7Q9NQW5 492 aa4.88□□□□□ -1.63
HMGB3P21-201ENST00000452483 EIF2B3Q9NR50 452 aaKnown RBP4.88□□□□□ -1.63
HMGB3P21-201ENST00000452483 TMEM5Q9Y2B1 443 aa4.88□□□□□ -1.63
HMGB3P21-201ENST00000452483 ANGPTL3Q9Y5C1 460 aa4.88□□□□□ -1.63
HMGB3P21-201ENST00000452483 EPN1Q9Y6I3 576 aaPredicted RBP4.88□□□□□ -1.63
HMGB3P21-201ENST00000452483 A0A1W2PPC4 97 aa4.87□□□□□ -1.63
HMGB3P21-201ENST00000452483 LCHNA4D1U4 455 aa4.87□□□□□ -1.63
HMGB3P21-201ENST00000452483 PI4K2BG5E9Z4 385 aa4.87□□□□□ -1.63
HMGB3P21-201ENST00000452483 GSTA4O15217 222 aa4.87□□□□□ -1.63
HMGB3P21-201ENST00000452483 SRGAP2O75044 1071 aa4.87□□□□□ -1.63
HMGB3P21-201ENST00000452483 KIAA0754O94854 1291 aa4.87□□□□□ -1.63
HMGB3P21-201ENST00000452483 UBOX5O94941 541 aa4.87□□□□□ -1.63
HMGB3P21-201ENST00000452483 SCG5P05408 212 aa4.87□□□□□ -1.63
HMGB3P21-201ENST00000452483 ATP5BP06576 529 aaKnown RBP4.87□□□□□ -1.63
HMGB3P21-201ENST00000452483 SRGAP2BP0DMP2 458 aa4.87□□□□□ -1.63
HMGB3P21-201ENST00000452483 RARBP10826 455 aa4.87□□□□□ -1.63
HMGB3P21-201ENST00000452483 ACADMP11310 421 aa4.87□□□□□ -1.63
HMGB3P21-201ENST00000452483 RPS2P15880 293 aaKnown RBP4.87□□□□□ -1.63
HMGB3P21-201ENST00000452483 JUNBP17275 347 aaPredicted RBP4.87□□□□□ -1.63
HMGB3P21-201ENST00000452483 ENPP1P22413 925 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms