RNA–Protein interactions for RNA: ENST00000451823.2

HMGB3P22-202, Transcript of high mobility group box 3 pseudogene 22, humanhuman

BASIC

Gene HMGB3P22, Length 572 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P22-202ENST00000451823 VAMP1P23763 118 aa4.57□□□□□ -1.68
HMGB3P22-202ENST00000451823 RPL13P26373 211 aaKnown RBP4.57□□□□□ -1.68
HMGB3P22-202ENST00000451823 ELF1P32519 619 aa4.57□□□□□ -1.68
HMGB3P22-202ENST00000451823 IL15P40933 162 aaPredicted RBP4.57□□□□□ -1.68
HMGB3P22-202ENST00000451823 MNAT1P51948 309 aa4.57□□□□□ -1.68
HMGB3P22-202ENST00000451823 COPB1P53618 953 aaKnown RBP4.57□□□□□ -1.68
HMGB3P22-202ENST00000451823 NAP1L1P55209 391 aaKnown RBP4.57□□□□□ -1.68
HMGB3P22-202ENST00000451823 GNGT1P63211 74 aa4.57□□□□□ -1.68
HMGB3P22-202ENST00000451823 ZXDAP98168 799 aa4.57□□□□□ -1.68
HMGB3P22-202ENST00000451823 CDK17Q00537 523 aa4.57□□□□□ -1.68
HMGB3P22-202ENST00000451823 APBA1Q02410 837 aa4.57□□□□□ -1.68
HMGB3P22-202ENST00000451823 SPAG1Q07617 926 aa4.57□□□□□ -1.68
HMGB3P22-202ENST00000451823 NEDD9Q14511 834 aa4.57□□□□□ -1.68
HMGB3P22-202ENST00000451823 KRT31Q15323 416 aa4.57□□□□□ -1.68
HMGB3P22-202ENST00000451823 ALX1Q15699 326 aa4.57□□□□□ -1.68
HMGB3P22-202ENST00000451823 IMMTQ16891 758 aaKnown RBP4.57□□□□□ -1.68
HMGB3P22-202ENST00000451823 INF2Q27J81 1249 aa4.57□□□□□ -1.68
HMGB3P22-202ENST00000451823 LACTB2Q53H82 288 aaPredicted RBP4.57□□□□□ -1.68
HMGB3P22-202ENST00000451823 RILPL1Q5EBL4 403 aa4.57□□□□□ -1.68
HMGB3P22-202ENST00000451823 MBLAC2Q68D91 279 aa4.57□□□□□ -1.68
HMGB3P22-202ENST00000451823 ZNF530Q6P9A1 599 aaPredicted RBP4.57□□□□□ -1.68
HMGB3P22-202ENST00000451823 EMBQ6PCB8 327 aa4.57□□□□□ -1.68
HMGB3P22-202ENST00000451823 WDR59Q6PJI9 974 aa4.57□□□□□ -1.68
HMGB3P22-202ENST00000451823 APOA5Q6Q788 366 aa4.57□□□□□ -1.68
HMGB3P22-202ENST00000451823 VHLLQ6RSH7 139 aa4.57□□□□□ -1.68
HMGB3P22-202ENST00000451823 ETV3LQ6ZN32 361 aa4.57□□□□□ -1.68
HMGB3P22-202ENST00000451823 CEP68Q76N32 757 aa4.57□□□□□ -1.68
HMGB3P22-202ENST00000451823 CYB5R4Q7L1T6 521 aa4.57□□□□□ -1.68
HMGB3P22-202ENST00000451823 LIMS2Q7Z4I7 341 aa4.57□□□□□ -1.68
HMGB3P22-202ENST00000451823 TAX1BP1Q86VP1 789 aa4.57□□□□□ -1.68
HMGB3P22-202ENST00000451823 FAM228AQ86W67 206 aa4.57□□□□□ -1.68
HMGB3P22-202ENST00000451823 NOSTRINQ8IVI9 506 aa4.57□□□□□ -1.68
HMGB3P22-202ENST00000451823 IQCKQ8N0W5 287 aa4.57□□□□□ -1.68
HMGB3P22-202ENST00000451823 GPATCH11Q8N954 259 aa4.57□□□□□ -1.68
HMGB3P22-202ENST00000451823 TXNDC5Q8NBS9 432 aaKnown RBP4.57□□□□□ -1.68
HMGB3P22-202ENST00000451823 C3orf20Q8ND61 904 aa4.57□□□□□ -1.68
HMGB3P22-202ENST00000451823 BVESQ8NE79 360 aa4.57□□□□□ -1.68
HMGB3P22-202ENST00000451823 CHST13Q8NET6 341 aa4.57□□□□□ -1.68
HMGB3P22-202ENST00000451823 OR6P1Q8NGX9 317 aa4.57□□□□□ -1.68
HMGB3P22-202ENST00000451823 BCAS4Q8TDM0 211 aa4.57□□□□□ -1.68
HMGB3P22-202ENST00000451823 APPBP2Q92624 585 aa4.57□□□□□ -1.68
HMGB3P22-202ENST00000451823 PPP1R14AQ96A00 147 aa4.57□□□□□ -1.68
HMGB3P22-202ENST00000451823 PAGE5Q96GU1 130 aa4.57□□□□□ -1.68
HMGB3P22-202ENST00000451823 CHP1Q99653 195 aa4.57□□□□□ -1.68
HMGB3P22-202ENST00000451823 TTYH3Q9C0H2 523 aa4.57□□□□□ -1.68
HMGB3P22-202ENST00000451823 FOXP1Q9H334 677 aaPredicted RBP4.57□□□□□ -1.68
HMGB3P22-202ENST00000451823 CAPN11Q9UMQ6 739 aa4.57□□□□□ -1.68
HMGB3P22-202ENST00000451823 EMC9Q9Y3B6 208 aa4.57□□□□□ -1.68
HMGB3P22-202ENST00000451823 TBX22Q9Y458 520 aa4.57□□□□□ -1.68
HMGB3P22-202ENST00000451823 SAR1BQ9Y6B6 198 aa4.57□□□□□ -1.68
HMGB3P22-202ENST00000451823 FER1L4A9Z1Z3 1794 aa4.56□□□□□ -1.68
HMGB3P22-202ENST00000451823 SHTN1A0MZ66 631 aa4.56□□□□□ -1.68
HMGB3P22-202ENST00000451823 GOLGA6BA6NDN3 693 aa4.56□□□□□ -1.68
HMGB3P22-202ENST00000451823 RASSF10A6NK89 507 aa4.56□□□□□ -1.68
HMGB3P22-202ENST00000451823 MYO1FO00160 1098 aa4.56□□□□□ -1.68
HMGB3P22-202ENST00000451823 EYA2O00167 538 aa4.56□□□□□ -1.68
HMGB3P22-202ENST00000451823 NOP56O00567 594 aaKnown RBP4.56□□□□□ -1.68
HMGB3P22-202ENST00000451823 CPLX1O14810 134 aa4.56□□□□□ -1.68
HMGB3P22-202ENST00000451823 SCAMP3O14828 347 aaKnown RBP4.56□□□□□ -1.68
HMGB3P22-202ENST00000451823 PPP1R12AO14974 1030 aaPredicted RBP4.56□□□□□ -1.68
HMGB3P22-202ENST00000451823 POLR2DO15514 142 aaKnown RBP4.56□□□□□ -1.68
HMGB3P22-202ENST00000451823 LCA5LO95447 670 aa4.56□□□□□ -1.68
HMGB3P22-202ENST00000451823 MYBP10242 640 aa4.56□□□□□ -1.68
HMGB3P22-202ENST00000451823 GCFC2P16383 781 aaKnown RBP4.56□□□□□ -1.68
HMGB3P22-202ENST00000451823 IFNAR1P17181 557 aa4.56□□□□□ -1.68
HMGB3P22-202ENST00000451823 CDC25AP30304 524 aa4.56□□□□□ -1.68
HMGB3P22-202ENST00000451823 HNRNPH3P31942 346 aaKnown RBP4.56□□□□□ -1.68
HMGB3P22-202ENST00000451823 THBS2P35442 1172 aa4.56□□□□□ -1.68
HMGB3P22-202ENST00000451823 LIFRP42702 1097 aa4.56□□□□□ -1.68
HMGB3P22-202ENST00000451823 METAP2P50579 478 aaKnown RBP eCLIP4.56□□□□□ -1.68
HMGB3P22-202ENST00000451823 RCAN1P53805 252 aa4.56□□□□□ -1.68
HMGB3P22-202ENST00000451823 NEXNQ0ZGT2 675 aa4.56□□□□□ -1.68
HMGB3P22-202ENST00000451823 GRIK3Q13003 919 aa4.56□□□□□ -1.68
HMGB3P22-202ENST00000451823 CRYMQ14894 314 aa4.56□□□□□ -1.68
HMGB3P22-202ENST00000451823 FILIP1LQ4L180 1135 aa4.56□□□□□ -1.68
HMGB3P22-202ENST00000451823 GLE1Q53GS7 698 aaKnown RBP4.56□□□□□ -1.68
HMGB3P22-202ENST00000451823 C9orf131Q5VYM1 1079 aa4.56□□□□□ -1.68
HMGB3P22-202ENST00000451823 NAA35Q5VZE5 725 aa4.56□□□□□ -1.68
HMGB3P22-202ENST00000451823 TMED8Q6PL24 325 aaPredicted RBP4.56□□□□□ -1.68
HMGB3P22-202ENST00000451823 USP49Q70CQ1 688 aa4.56□□□□□ -1.68
HMGB3P22-202ENST00000451823 GRAMD1CQ8IYS0 662 aa4.56□□□□□ -1.68
HMGB3P22-202ENST00000451823 LGI4Q8N135 537 aa4.56□□□□□ -1.68
HMGB3P22-202ENST00000451823 MAB21L3Q8N8X9 362 aa4.56□□□□□ -1.68
HMGB3P22-202ENST00000451823 C19orf47Q8N9M1 422 aaKnown RBP4.56□□□□□ -1.68
HMGB3P22-202ENST00000451823 EIF1ADQ8N9N8 165 aaKnown RBP4.56□□□□□ -1.68
HMGB3P22-202ENST00000451823 OR8K1Q8NGG5 319 aa4.56□□□□□ -1.68
HMGB3P22-202ENST00000451823 ARL8AQ96BM9 186 aa4.56□□□□□ -1.68
HMGB3P22-202ENST00000451823 SAMD11Q96NU1 681 aa4.56□□□□□ -1.68
HMGB3P22-202ENST00000451823 MYD88Q99836 296 aa4.56□□□□□ -1.68
HMGB3P22-202ENST00000451823 SLF1Q9BQI6 1058 aa4.56□□□□□ -1.68
HMGB3P22-202ENST00000451823 CRACR2AQ9BSW2 395 aa4.56□□□□□ -1.68
HMGB3P22-202ENST00000451823 LGR4Q9BXB1 951 aa4.56□□□□□ -1.68
HMGB3P22-202ENST00000451823 AP5M1Q9H0R1 490 aa4.56□□□□□ -1.68
HMGB3P22-202ENST00000451823 EPN3Q9H201 632 aa4.56□□□□□ -1.68
HMGB3P22-202ENST00000451823 ACTR5Q9H9F9 607 aaPredicted RBP4.56□□□□□ -1.68
HMGB3P22-202ENST00000451823 LY9Q9HBG7 655 aa4.56□□□□□ -1.68
HMGB3P22-202ENST00000451823 PCDH18Q9HCL0 1135 aa4.56□□□□□ -1.68
HMGB3P22-202ENST00000451823 GDF3Q9NR23 364 aa4.56□□□□□ -1.68
HMGB3P22-202ENST00000451823 CYP26B1Q9NR63 512 aa4.56□□□□□ -1.68
HMGB3P22-202ENST00000451823 KLC4Q9NSK0 619 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms