RNA–Protein interactions for RNA: ENST00000451542.5

SMPD4-212, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 796 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-212ENST00000451542 FAM189A1O60320 539 aa13.06□□□□□ -0.32
SMPD4-212ENST00000451542 RHOBTB3O94955 611 aa13.06□□□□□ -0.32
SMPD4-212ENST00000451542 ADSSP30520 456 aa13.06□□□□□ -0.32
SMPD4-212ENST00000451542 LRPAP1P30533 357 aa13.06□□□□□ -0.32
SMPD4-212ENST00000451542 TFF2Q03403 129 aa13.06□□□□□ -0.32
SMPD4-212ENST00000451542 KIAA0319Q5VV43 1072 aa13.06□□□□□ -0.32
SMPD4-212ENST00000451542 SPATA1Q5VX52 437 aa13.06□□□□□ -0.32
SMPD4-212ENST00000451542 JADE1Q6IE81 842 aa13.06□□□□□ -0.32
SMPD4-212ENST00000451542 PTCRAQ6ISU1 281 aaPredicted RBP13.06□□□□□ -0.32
SMPD4-212ENST00000451542 CES5AQ6NT32 575 aa13.06□□□□□ -0.32
SMPD4-212ENST00000451542 ANKS3Q6ZW76 656 aa13.06□□□□□ -0.32
SMPD4-212ENST00000451542 BRSK2Q8IWQ3 736 aa13.06□□□□□ -0.32
SMPD4-212ENST00000451542 NELFCDQ8IXH7 590 aa13.06□□□□□ -0.32
SMPD4-212ENST00000451542 FMR1NBQ8N0W7 255 aaPredicted RBP13.06□□□□□ -0.32
SMPD4-212ENST00000451542 XXYLT1Q8NBI6 393 aa13.06□□□□□ -0.32
SMPD4-212ENST00000451542 APPL2Q8NEU8 664 aa13.06□□□□□ -0.32
SMPD4-212ENST00000451542 SCFD1Q8WVM8 642 aa13.06□□□□□ -0.32
SMPD4-212ENST00000451542 AUTS2Q8WXX7 1259 aa13.06□□□□□ -0.32
SMPD4-212ENST00000451542 PIK3R5Q8WYR1 880 aa13.06□□□□□ -0.32
SMPD4-212ENST00000451542 RABGGTAQ92696 567 aa13.06□□□□□ -0.32
SMPD4-212ENST00000451542 KLHL5Q96PQ7 755 aa13.06□□□□□ -0.32
SMPD4-212ENST00000451542 CBWD1Q9BRT8 395 aa13.06□□□□□ -0.32
SMPD4-212ENST00000451542 VN1R3Q9BXE9 311 aa13.06□□□□□ -0.32
SMPD4-212ENST00000451542 FGFBP2Q9BYJ0 223 aa13.06□□□□□ -0.32
SMPD4-212ENST00000451542 CXCL16Q9H2A7 254 aa13.06□□□□□ -0.32
SMPD4-212ENST00000451542 PCIF1Q9H4Z3 704 aa13.06□□□□□ -0.32
SMPD4-212ENST00000451542 GOLGA2P5Q9HBQ8 144 aa13.06□□□□□ -0.32
SMPD4-212ENST00000451542 RXFP1Q9HBX9 757 aa13.06□□□□□ -0.32
SMPD4-212ENST00000451542 FNIP2Q9P278 1114 aa13.06□□□□□ -0.32
SMPD4-212ENST00000451542 HCFC2Q9Y5Z7 792 aa13.06□□□□□ -0.32
SMPD4-212ENST00000451542 PDCD11Q14690 1871 aaKnown RBP13.06□□□□□ -0.32
SMPD4-212ENST00000451542 CHD9Q3L8U1 2897 aa13.06□□□□□ -0.32
SMPD4-212ENST00000451542 H7C4K7 107 aa13.05□□□□□ -0.32
SMPD4-212ENST00000451542 CALUO43852 315 aaPredicted RBP13.05□□□□□ -0.32
SMPD4-212ENST00000451542 PRPF40AO75400 957 aaKnown RBP13.05□□□□□ -0.32
SMPD4-212ENST00000451542 EFEMP2O95967 443 aa13.05□□□□□ -0.32
SMPD4-212ENST00000451542 GLUD1P00367 558 aa13.05□□□□□ -0.32
SMPD4-212ENST00000451542 CNPP09543 421 aaKnown RBP13.05□□□□□ -0.32
SMPD4-212ENST00000451542 FGFR3P22607 806 aa13.05□□□□□ -0.32
SMPD4-212ENST00000451542 GTF2F1P35269 517 aaKnown RBP eCLIP13.05□□□□□ -0.327e-8■■□□□ 11.7
SMPD4-212ENST00000451542 UBE2HP62256 183 aa13.05□□□□□ -0.32
SMPD4-212ENST00000451542 SOX4Q06945 474 aaPredicted RBP13.05□□□□□ -0.32
SMPD4-212ENST00000451542 SPAG1Q07617 926 aa13.05□□□□□ -0.32
SMPD4-212ENST00000451542 DPYDQ12882 1025 aa13.05□□□□□ -0.32
SMPD4-212ENST00000451542 STK4Q13043 487 aa13.05□□□□□ -0.32
SMPD4-212ENST00000451542 SMAD4Q13485 552 aaKnown RBP13.05□□□□□ -0.32
SMPD4-212ENST00000451542 ZBTB6Q15916 424 aa13.05□□□□□ -0.32
SMPD4-212ENST00000451542 PSMD5Q16401 504 aa13.05□□□□□ -0.32
SMPD4-212ENST00000451542 ZBTB41Q5SVQ8 909 aa13.05□□□□□ -0.32
SMPD4-212ENST00000451542 LLGL2Q6P1M3 1020 aa13.05□□□□□ -0.32
SMPD4-212ENST00000451542 USP37Q86T82 979 aa13.05□□□□□ -0.32
SMPD4-212ENST00000451542 ELOA2Q8IYF1 753 aaPredicted RBP13.05□□□□□ -0.32
SMPD4-212ENST00000451542 SMARCE1Q969G3 411 aa13.05□□□□□ -0.32
SMPD4-212ENST00000451542 C18orf25Q96B23 403 aaPredicted RBP13.05□□□□□ -0.32
SMPD4-212ENST00000451542 SAAL1Q96ER3 474 aa13.05□□□□□ -0.32
SMPD4-212ENST00000451542 IPO9Q96P70 1041 aaKnown RBP13.05□□□□□ -0.32
SMPD4-212ENST00000451542 GSDMAQ96QA5 445 aa13.05□□□□□ -0.32
SMPD4-212ENST00000451542 AGPAT3Q9NRZ7 376 aa13.05□□□□□ -0.32
SMPD4-212ENST00000451542 HSPBP1Q9NZL4 362 aa13.05□□□□□ -0.32
SMPD4-212ENST00000451542 CACNG4Q9UBN1 327 aa13.05□□□□□ -0.32
SMPD4-212ENST00000451542 GOLGA8IPA6NC78 632 aa13.04□□□□□ -0.32
SMPD4-212ENST00000451542 GOLGA8JA6NMD2 632 aa13.04□□□□□ -0.32
SMPD4-212ENST00000451542 F8W810 466 aa13.04□□□□□ -0.32
SMPD4-212ENST00000451542 PDXKO00764 312 aa13.04□□□□□ -0.32
SMPD4-212ENST00000451542 TEX28O15482 410 aa13.04□□□□□ -0.32
SMPD4-212ENST00000451542 LINC01565O15544 149 aa13.04□□□□□ -0.32
SMPD4-212ENST00000451542 EXOC3O60645 756 aa13.04□□□□□ -0.32
SMPD4-212ENST00000451542 LILRB3O75022 631 aa13.04□□□□□ -0.32
SMPD4-212ENST00000451542 TBX10O75333 385 aa13.04□□□□□ -0.32
SMPD4-212ENST00000451542 TMEM191BP0C7N4 346 aa13.04□□□□□ -0.32
SMPD4-212ENST00000451542 RPL13P26373 211 aaKnown RBP13.04□□□□□ -0.32
SMPD4-212ENST00000451542 LTBRP36941 435 aa13.04□□□□□ -0.32
SMPD4-212ENST00000451542 PNPLA4P41247 253 aa13.04□□□□□ -0.32
SMPD4-212ENST00000451542 TFAMQ00059 246 aaKnown RBP13.04□□□□□ -0.32
SMPD4-212ENST00000451542 ITIH3Q06033 890 aa13.04□□□□□ -0.32
SMPD4-212ENST00000451542 MYBPC2Q14324 1141 aa13.04□□□□□ -0.32
SMPD4-212ENST00000451542 ANKRD54Q6NXT1 300 aa13.04□□□□□ -0.32
SMPD4-212ENST00000451542 CRELD2Q6UXH1 353 aaPredicted RBP13.04□□□□□ -0.32
SMPD4-212ENST00000451542 DSTYKQ6XUX3 929 aa13.04□□□□□ -0.32
SMPD4-212ENST00000451542 TAS1R1Q7RTX1 841 aa13.04□□□□□ -0.32
SMPD4-212ENST00000451542 C12orf56Q8IXR9 622 aa13.04□□□□□ -0.32
SMPD4-212ENST00000451542 GLIS3Q8NEA6 775 aa13.04□□□□□ -0.32
SMPD4-212ENST00000451542 ENGASEQ8NFI3 743 aa13.04□□□□□ -0.32
SMPD4-212ENST00000451542 HDAC7Q8WUI4 952 aa13.04□□□□□ -0.32
SMPD4-212ENST00000451542 ANKRD36BP1Q96IX9 119 aa13.04□□□□□ -0.32
SMPD4-212ENST00000451542 ZNF560Q96MR9 790 aa13.04□□□□□ -0.32
SMPD4-212ENST00000451542 GBP4Q96PP9 640 aa13.04□□□□□ -0.32
SMPD4-212ENST00000451542 FNBP1Q96RU3 617 aa13.04□□□□□ -0.32
SMPD4-212ENST00000451542 POP1Q99575 1024 aaKnown RBP13.04□□□□□ -0.32
SMPD4-212ENST00000451542 OXCT2Q9BYC2 517 aaPredicted RBP13.04□□□□□ -0.32
SMPD4-212ENST00000451542 PLEKHA4Q9H4M7 779 aa13.04□□□□□ -0.32
SMPD4-212ENST00000451542 DPP3Q9NY33 737 aa13.04□□□□□ -0.32
SMPD4-212ENST00000451542 TUBGCP4Q9UGJ1 667 aa13.04□□□□□ -0.32
SMPD4-212ENST00000451542 BARX2Q9UMQ3 279 aaPredicted RBP13.04□□□□□ -0.32
SMPD4-212ENST00000451542 CHD7Q9P2D1 2997 aa13.03□□□□□ -0.32
SMPD4-212ENST00000451542 GOLGA6L22H0YM25 854 aa13.03□□□□□ -0.32
SMPD4-212ENST00000451542 CLIC2O15247 247 aa13.03□□□□□ -0.32
SMPD4-212ENST00000451542 TGFB1I1O43294 461 aa13.03□□□□□ -0.32
SMPD4-212ENST00000451542 TNNC2P02585 160 aa13.03□□□□□ -0.32
SMPD4-212ENST00000451542 NFICP08651 508 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms