RNA–Protein interactions for RNA: ENST00000448872.6

RCL1-208, Transcript of RNA terminal phosphate cyclase like 1, humanhuman

TSL 1 (best) BASIC

Gene RCL1, Length 1,459 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1-208ENST00000448872 SMTNL1A8MU46 457 aa12.82□□□□□ -0.36
RCL1-208ENST00000448872 NT5C1B-RDH14C9J2C7 533 aa12.82□□□□□ -0.36
RCL1-208ENST00000448872 LRRN2O75325 713 aa12.82□□□□□ -0.36
RCL1-208ENST00000448872 MTIF2P46199 727 aaKnown RBP12.82□□□□□ -0.36
RCL1-208ENST00000448872 SLC11A1P49279 550 aa12.82□□□□□ -0.36
RCL1-208ENST00000448872 MCCD1P59942 119 aaPredicted RBP12.82□□□□□ -0.36
RCL1-208ENST00000448872 TUSC3Q13454 348 aa12.82□□□□□ -0.36
RCL1-208ENST00000448872 SURF1Q15526 300 aa12.82□□□□□ -0.36
RCL1-208ENST00000448872 CBWD6Q4V339 395 aa12.82□□□□□ -0.36
RCL1-208ENST00000448872 CBWD3Q5JTY5 395 aa12.82□□□□□ -0.36
RCL1-208ENST00000448872 CBWD5Q5RIA9 395 aa12.82□□□□□ -0.36
RCL1-208ENST00000448872 SPOUT1Q5T280 376 aaKnown RBP12.82□□□□□ -0.36
RCL1-208ENST00000448872 TDRD10Q5VZ19 366 aaKnown RBP12.82□□□□□ -0.36
RCL1-208ENST00000448872 TMEM173Q86WV6 379 aaPredicted RBP12.82□□□□□ -0.36
RCL1-208ENST00000448872 FIBCD1Q8N539 461 aa12.82□□□□□ -0.36
RCL1-208ENST00000448872 C3orf58Q8NDZ4 430 aa12.82□□□□□ -0.36
RCL1-208ENST00000448872 CXorf38Q8TB03 319 aa12.82□□□□□ -0.36
RCL1-208ENST00000448872 HASPINQ8TF76 798 aa12.82□□□□□ -0.36
RCL1-208ENST00000448872 BCL7CQ8WUZ0 217 aaPredicted RBP12.82□□□□□ -0.36
RCL1-208ENST00000448872 FAM193BQ96PV7 902 aaPredicted RBP12.82□□□□□ -0.36
RCL1-208ENST00000448872 NKX2-4Q9H2Z4 354 aa12.82□□□□□ -0.36
RCL1-208ENST00000448872 METTL14Q9HCE5 456 aaKnown RBP12.82□□□□□ -0.36
RCL1-208ENST00000448872 DPP3Q9NY33 737 aa12.82□□□□□ -0.36
RCL1-208ENST00000448872 TAB2Q9NYJ8 693 aa12.82□□□□□ -0.36
RCL1-208ENST00000448872 MAGEC2Q9UBF1 373 aaPredicted RBP12.82□□□□□ -0.36
RCL1-208ENST00000448872 SIX4Q9UIU6 781 aa12.82□□□□□ -0.36
RCL1-208ENST00000448872 UBQLN1Q9UMX0 589 aaKnown RBP12.82□□□□□ -0.36
RCL1-208ENST00000448872 PRG3Q9Y2Y8 225 aaPredicted RBP12.82□□□□□ -0.36
RCL1-208ENST00000448872 PCDHA11Q9Y5I1 949 aa12.82□□□□□ -0.36
RCL1-208ENST00000448872 MYH11P35749 1972 aa12.82□□□□□ -0.36
RCL1-208ENST00000448872 CEP290O15078 2479 aa12.81□□□□□ -0.36
RCL1-208ENST00000448872 LINC01553A4QN01 128 aa12.81□□□□□ -0.36
RCL1-208ENST00000448872 CAVIN2O95810 425 aa12.81□□□□□ -0.36
RCL1-208ENST00000448872 C4BPAP04003 597 aaKnown RBP12.81□□□□□ -0.36
RCL1-208ENST00000448872 ITGB3P05106 788 aa12.81□□□□□ -0.36
RCL1-208ENST00000448872 ITGB1P05556 798 aa12.81□□□□□ -0.36
RCL1-208ENST00000448872 GALTP07902 379 aa12.81□□□□□ -0.36
RCL1-208ENST00000448872 TMEM191BP0C7N4 346 aa12.81□□□□□ -0.36
RCL1-208ENST00000448872 OR1G1P47890 313 aa12.81□□□□□ -0.36
RCL1-208ENST00000448872 BCAR1P56945 870 aa12.81□□□□□ -0.36
RCL1-208ENST00000448872 HSP90AA2PQ14568 343 aaPredicted RBP12.81□□□□□ -0.36
RCL1-208ENST00000448872 KRT31Q15323 416 aa12.81□□□□□ -0.36
RCL1-208ENST00000448872 DUOXA2Q1HG44 320 aa12.81□□□□□ -0.36
RCL1-208ENST00000448872 SV2AQ7L0J3 742 aa12.81□□□□□ -0.36
RCL1-208ENST00000448872 APTXQ7Z2E3 356 aaKnown RBP12.81□□□□□ -0.36
RCL1-208ENST00000448872 TRAPPC11Q7Z392 1133 aa12.81□□□□□ -0.36
RCL1-208ENST00000448872 FAM114A1Q8IWE2 563 aa12.81□□□□□ -0.36
RCL1-208ENST00000448872 BEST2Q8NFU1 509 aa12.81□□□□□ -0.36
RCL1-208ENST00000448872 C17orf80Q9BSJ5 609 aa12.81□□□□□ -0.36
RCL1-208ENST00000448872 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.81□□□□□ -0.363e-13■■■■■ 167.7
RCL1-208ENST00000448872 SLC38A7Q9NVC3 462 aa12.81□□□□□ -0.36
RCL1-208ENST00000448872 MTUS1Q9ULD2 1270 aa12.81□□□□□ -0.36
RCL1-208ENST00000448872 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.81□□□□□ -0.36
RCL1-208ENST00000448872 CHD9Q3L8U1 2897 aa12.81□□□□□ -0.36
RCL1-208ENST00000448872 PODXLO00592 558 aa12.8□□□□□ -0.36
RCL1-208ENST00000448872 NRP1O14786 923 aa12.8□□□□□ -0.36
RCL1-208ENST00000448872 KIF4AO95239 1232 aa12.8□□□□□ -0.36
RCL1-208ENST00000448872 VNN1O95497 513 aa12.8□□□□□ -0.36
RCL1-208ENST00000448872 CST3P01034 146 aaPredicted RBP12.8□□□□□ -0.36
RCL1-208ENST00000448872 TNNC2P02585 160 aa12.8□□□□□ -0.36
RCL1-208ENST00000448872 KRT19P08727 400 aa12.8□□□□□ -0.36
RCL1-208ENST00000448872 EEF1GP26641 437 aaKnown RBP12.8□□□□□ -0.36
RCL1-208ENST00000448872 POLR2BP30876 1174 aaKnown RBP12.8□□□□□ -0.36
RCL1-208ENST00000448872 TAP1Q03518 808 aa12.8□□□□□ -0.36
RCL1-208ENST00000448872 BIRC3Q13489 604 aa12.8□□□□□ -0.36
RCL1-208ENST00000448872 UPP1Q16831 310 aa12.8□□□□□ -0.36
RCL1-208ENST00000448872 MIIPQ5JXC2 388 aa12.8□□□□□ -0.36
RCL1-208ENST00000448872 C9orf57Q5W0N0 161 aa12.8□□□□□ -0.36
RCL1-208ENST00000448872 CD300LGQ6UXG3 332 aa12.8□□□□□ -0.36
RCL1-208ENST00000448872 C15orf39Q6ZRI6 1047 aa12.8□□□□□ -0.36
RCL1-208ENST00000448872 COLGALT1Q8NBJ5 622 aa12.8□□□□□ -0.36
RCL1-208ENST00000448872 TAS1R2Q8TE23 839 aa12.8□□□□□ -0.36
RCL1-208ENST00000448872 CACTINQ8WUQ7 758 aaKnown RBP12.8□□□□□ -0.36
RCL1-208ENST00000448872 ANKRD36BP1Q96IX9 119 aa12.8□□□□□ -0.36
RCL1-208ENST00000448872 TUBGCP2Q9BSJ2 902 aa12.8□□□□□ -0.36
RCL1-208ENST00000448872 VPS16Q9H269 839 aa12.8□□□□□ -0.36
RCL1-208ENST00000448872 CERS4Q9HA82 394 aa12.8□□□□□ -0.36
RCL1-208ENST00000448872 MARCH5Q9NX47 278 aa12.8□□□□□ -0.36
RCL1-208ENST00000448872 ANO9A1A5B4 782 aa12.79□□□□□ -0.36
RCL1-208ENST00000448872 SOX1O00570 391 aaPredicted RBP12.79□□□□□ -0.36
RCL1-208ENST00000448872 SPTLC1O15269 473 aa12.79□□□□□ -0.36
RCL1-208ENST00000448872 PRKCSHP14314 528 aaPredicted RBP12.79□□□□□ -0.36
RCL1-208ENST00000448872 CYP3A5P20815 502 aa12.79□□□□□ -0.36
RCL1-208ENST00000448872 CDK11BP21127 795 aaKnown RBP12.79□□□□□ -0.36
RCL1-208ENST00000448872 DNAJB2P25686 324 aa12.79□□□□□ -0.36
RCL1-208ENST00000448872 LRPAP1P30533 357 aa12.79□□□□□ -0.36
RCL1-208ENST00000448872 ENPEPQ07075 957 aa12.79□□□□□ -0.36
RCL1-208ENST00000448872 KCNH2Q12809 1159 aa12.79□□□□□ -0.36
RCL1-208ENST00000448872 ZACNQ401N2 412 aa12.79□□□□□ -0.36
RCL1-208ENST00000448872 VWA3BQ502W6 1294 aa12.79□□□□□ -0.36
RCL1-208ENST00000448872 KCNT2Q6UVM3 1135 aa12.79□□□□□ -0.36
RCL1-208ENST00000448872 NT5DC4Q86YG4 428 aa12.79□□□□□ -0.36
RCL1-208ENST00000448872 SEMA4DQ92854 862 aa12.79□□□□□ -0.36
RCL1-208ENST00000448872 CLP1Q92989 425 aaKnown RBP12.79□□□□□ -0.36
RCL1-208ENST00000448872 TSPAN18Q96SJ8 248 aa12.79□□□□□ -0.36
RCL1-208ENST00000448872 TMEM175Q9BSA9 504 aa12.79□□□□□ -0.36
RCL1-208ENST00000448872 PI4K2AQ9BTU6 479 aa12.79□□□□□ -0.36
RCL1-208ENST00000448872 TMEM8AQ9HCN3 771 aa12.79□□□□□ -0.36
RCL1-208ENST00000448872 LIMA1Q9UHB6 759 aaKnown RBP12.79□□□□□ -0.36
RCL1-208ENST00000448872 MSRAQ9UJ68 235 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms