RNA–Protein interactions for RNA: ENST00000448520.5

PDLIM2-213, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-213ENST00000448520 CCDC73Q6ZRK6 1079 aa15.05■□□□□ -0
PDLIM2-213ENST00000448520 GRAMD1CQ8IYS0 662 aa15.05■□□□□ -0
PDLIM2-213ENST00000448520 FMR1NBQ8N0W7 255 aaPredicted RBP15.05■□□□□ -0
PDLIM2-213ENST00000448520 ENGASEQ8NFI3 743 aa15.05■□□□□ -0
PDLIM2-213ENST00000448520 BSNDQ8WZ55 320 aa15.05■□□□□ -0
PDLIM2-213ENST00000448520 CCDC113Q9H0I3 377 aa15.05■□□□□ -0
PDLIM2-213ENST00000448520 SLC2A4RGQ9NR83 387 aa15.05■□□□□ -0
PDLIM2-213ENST00000448520 CCDC39Q9UFE4 941 aa15.05■□□□□ -0
PDLIM2-213ENST00000448520 TRIP11Q15643 1979 aa15.05■□□□□ -0
PDLIM2-213ENST00000448520 TTLL13PA6NNM8 815 aa15.04■□□□□ -0
PDLIM2-213ENST00000448520 TMEM189-UBE2V1I3L0A0 370 aa15.04■□□□□ -0
PDLIM2-213ENST00000448520 K7ERI5 159 aa15.04■□□□□ -0
PDLIM2-213ENST00000448520 TRAPPC3O43617 180 aa15.04■□□□□ -0
PDLIM2-213ENST00000448520 ACTN4O43707 911 aaKnown RBP15.04■□□□□ -0
PDLIM2-213ENST00000448520 XYLBO75191 536 aa15.04■□□□□ -0
PDLIM2-213ENST00000448520 ZNF202O95125 648 aa15.04■□□□□ -0
PDLIM2-213ENST00000448520 KIF4AO95239 1232 aa15.04■□□□□ -0
PDLIM2-213ENST00000448520 FAM160A1Q05DH4 1040 aa15.04■□□□□ -0
PDLIM2-213ENST00000448520 SNW1Q13573 536 aaKnown RBP15.04■□□□□ -0
PDLIM2-213ENST00000448520 HTR4Q13639 388 aa15.04■□□□□ -0
PDLIM2-213ENST00000448520 RAB33AQ14088 237 aa15.04■□□□□ -0
PDLIM2-213ENST00000448520 MCM6Q14566 821 aa15.04■□□□□ -0
PDLIM2-213ENST00000448520 NAB2Q15742 525 aa15.04■□□□□ -0
PDLIM2-213ENST00000448520 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.04■□□□□ -0
PDLIM2-213ENST00000448520 GET4Q7L5D6 327 aaPredicted RBP15.04■□□□□ -0
PDLIM2-213ENST00000448520 FRMD5Q7Z6J6 570 aa15.04■□□□□ -0
PDLIM2-213ENST00000448520 HASPINQ8TF76 798 aa15.04■□□□□ -0
PDLIM2-213ENST00000448520 SHDQ96IW2 340 aa15.04■□□□□ -0
PDLIM2-213ENST00000448520 UROC1Q96N76 676 aa15.04■□□□□ -0
PDLIM2-213ENST00000448520 CACNG4Q9UBN1 327 aa15.04■□□□□ -0
PDLIM2-213ENST00000448520 CDH7Q9ULB5 785 aa15.04■□□□□ -0
PDLIM2-213ENST00000448520 CACNA1IQ9P0X4 2223 aa15.03■□□□□ -0
PDLIM2-213ENST00000448520 PHLPP2Q6ZVD8 1323 aa15.03■□□□□ -0
PDLIM2-213ENST00000448520 B3GAT3O94766 335 aa15.03■□□□□ -0
PDLIM2-213ENST00000448520 C8AP07357 584 aa15.03■□□□□ -0
PDLIM2-213ENST00000448520 POU2F2P09086 479 aa15.03■□□□□ -0
PDLIM2-213ENST00000448520 CASP1P29466 404 aa15.03■□□□□ -0
PDLIM2-213ENST00000448520 FOXK2Q01167 660 aa15.03■□□□□ -0
PDLIM2-213ENST00000448520 ATF7IP2Q5U623 682 aa15.03■□□□□ -0
PDLIM2-213ENST00000448520 MTSS1LQ765P7 747 aa15.03■□□□□ -0
PDLIM2-213ENST00000448520 GRASPQ7Z6J2 395 aaPredicted RBP15.03■□□□□ -0
PDLIM2-213ENST00000448520 GPR152Q8TDT2 470 aa15.03■□□□□ -0
PDLIM2-213ENST00000448520 RAD54LQ92698 747 aa15.03■□□□□ -0
PDLIM2-213ENST00000448520 BHMT2Q9H2M3 363 aa15.03■□□□□ -0
PDLIM2-213ENST00000448520 TBC1D17Q9HA65 648 aa15.03■□□□□ -0
PDLIM2-213ENST00000448520 CA14Q9ULX7 337 aa15.03■□□□□ -0
PDLIM2-213ENST00000448520 GDAQ9Y2T3 454 aa15.03■□□□□ -0
PDLIM2-213ENST00000448520 SIT1Q9Y3P8 196 aa15.03■□□□□ -0
PDLIM2-213ENST00000448520 SPTBN4Q9H254 2564 aa15.03■□□□□ -0
PDLIM2-213ENST00000448520 MYO15AQ9UKN7 3530 aa15.03■□□□□ -0
PDLIM2-213ENST00000448520 EP300Q09472 2414 aaPredicted RBP15.02■□□□□ -0
PDLIM2-213ENST00000448520 PRR29P0C7W0 189 aa15.02■□□□□ -0
PDLIM2-213ENST00000448520 FGFR3P22607 806 aa15.02■□□□□ -0
PDLIM2-213ENST00000448520 NT5DC1Q5TFE4 455 aa15.02■□□□□ -0
PDLIM2-213ENST00000448520 EEF1DP3Q658K8 133 aa15.02■□□□□ -0
PDLIM2-213ENST00000448520 ANKS3Q6ZW76 656 aa15.02■□□□□ -0
PDLIM2-213ENST00000448520 DDX27Q96GQ7 796 aaKnown RBP15.02■□□□□ -0
PDLIM2-213ENST00000448520 PPP1R10Q96QC0 940 aaKnown RBP15.02■□□□□ -0
PDLIM2-213ENST00000448520 RUSC1Q9BVN2 902 aa15.02■□□□□ -0
PDLIM2-213ENST00000448520 TMEM134Q9H6X4 195 aa15.02■□□□□ -0
PDLIM2-213ENST00000448520 POLD4Q9HCU8 107 aa15.02■□□□□ -0
PDLIM2-213ENST00000448520 ARHGEF3Q9NR81 526 aa15.02■□□□□ -0
PDLIM2-213ENST00000448520 KCNG1Q9UIX4 513 aa15.02■□□□□ -0
PDLIM2-213ENST00000448520 DNM3Q9UQ16 869 aa15.02■□□□□ -0
PDLIM2-213ENST00000448520 TNFSF13BQ9Y275 285 aa15.02■□□□□ -0
PDLIM2-213ENST00000448520 BACE2Q9Y5Z0 518 aa15.02■□□□□ -0
PDLIM2-213ENST00000448520 NUMBLQ9Y6R0 609 aa15.02■□□□□ -0
PDLIM2-213ENST00000448520 NPHP3-ACAD11A0A0J9YXS1 232 aa15.01□□□□□ -0.01
PDLIM2-213ENST00000448520 SLC26A4O43511 780 aa15.01□□□□□ -0.01
PDLIM2-213ENST00000448520 PLA2G4BP0C869 781 aa15.01□□□□□ -0.01
PDLIM2-213ENST00000448520 OR1D2P34982 312 aa15.01□□□□□ -0.01
PDLIM2-213ENST00000448520 AFMP43652 599 aa15.01□□□□□ -0.01
PDLIM2-213ENST00000448520 YARSP54577 528 aaKnown RBP15.01□□□□□ -0.01
PDLIM2-213ENST00000448520 STARD6P59095 220 aa15.01□□□□□ -0.01
PDLIM2-213ENST00000448520 UPP1Q16831 310 aa15.01□□□□□ -0.01
PDLIM2-213ENST00000448520 KRBA2Q6ZNG9 492 aa15.01□□□□□ -0.01
PDLIM2-213ENST00000448520 ADSSL1Q8N142 457 aa15.01□□□□□ -0.01
PDLIM2-213ENST00000448520 IQUBQ8NA54 791 aa15.01□□□□□ -0.01
PDLIM2-213ENST00000448520 LARP4BQ92615 738 aaKnown RBP15.01□□□□□ -0.01
PDLIM2-213ENST00000448520 ERCC4Q92889 916 aaPredicted RBP15.01□□□□□ -0.01
PDLIM2-213ENST00000448520 FGF13Q92913 245 aa15.01□□□□□ -0.01
PDLIM2-213ENST00000448520 SNX27Q96L92 541 aa15.01□□□□□ -0.01
PDLIM2-213ENST00000448520 CCDC94Q9BW85 323 aaPredicted RBP15.01□□□□□ -0.01
PDLIM2-213ENST00000448520 C17orf75Q9HAS0 396 aa15.01□□□□□ -0.01
PDLIM2-213ENST00000448520 TOPORSQ9NS56 1045 aaPredicted RBP15.01□□□□□ -0.01
PDLIM2-213ENST00000448520 MTRRQ9UBK8 725 aa15.01□□□□□ -0.01
PDLIM2-213ENST00000448520 STK17AQ9UEE5 414 aa15.01□□□□□ -0.01
PDLIM2-213ENST00000448520 POLIQ9UNA4 740 aa15.01□□□□□ -0.01
PDLIM2-213ENST00000448520 USP20Q9Y2K6 914 aa15.01□□□□□ -0.01
PDLIM2-213ENST00000448520 VWA8A3KMH1 1905 aa15.01□□□□□ -0.01
PDLIM2-213ENST00000448520 VPS13AQ96RL7 3174 aa15□□□□□ -0.01
PDLIM2-213ENST00000448520 SMIM28A0A1B0GU29 152 aa15□□□□□ -0.01
PDLIM2-213ENST00000448520 CCL16O15467 120 aa15□□□□□ -0.01
PDLIM2-213ENST00000448520 ADAM12O43184 909 aa15□□□□□ -0.01
PDLIM2-213ENST00000448520 GRM5P41594 1212 aa15□□□□□ -0.01
PDLIM2-213ENST00000448520 CLCNKBP51801 687 aa15□□□□□ -0.01
PDLIM2-213ENST00000448520 SLC12A3P55017 1021 aa15□□□□□ -0.01
PDLIM2-213ENST00000448520 GPC5P78333 572 aa15□□□□□ -0.01
PDLIM2-213ENST00000448520 CACNB1Q02641 598 aaPredicted RBP15□□□□□ -0.01
PDLIM2-213ENST00000448520 RAD51AP2Q09MP3 1159 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms