RNA–Protein interactions for RNA: ENST00000448416.6

SYNPO2-204, Transcript of synaptopodin 2, humanhuman

TSL 2 BASIC

Gene SYNPO2, Length 4,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-204ENST00000448416 SLC35C1Q96A29 364 aa9.98□□□□□ -0.81
SYNPO2-204ENST00000448416 SIKE1Q9BRV8 207 aa9.98□□□□□ -0.81
SYNPO2-204ENST00000448416 ADAM33Q9BZ11 813 aa9.98□□□□□ -0.81
SYNPO2-204ENST00000448416 UBA5Q9GZZ9 404 aa9.98□□□□□ -0.81
SYNPO2-204ENST00000448416 KIAA1586Q9HCI6 787 aa9.98□□□□□ -0.81
SYNPO2-204ENST00000448416 EURLQ9NYK6 297 aa9.98□□□□□ -0.81
SYNPO2-204ENST00000448416 KIF13BQ9NQT8 1826 aa9.98□□□□□ -0.81
SYNPO2-204ENST00000448416 CALUO43852 315 aaPredicted RBP9.98□□□□□ -0.81
SYNPO2-204ENST00000448416 PLA2G4BP0C869 781 aa9.98□□□□□ -0.81
SYNPO2-204ENST00000448416 RARBP10826 455 aa9.98□□□□□ -0.81
SYNPO2-204ENST00000448416 ZFXP17010 805 aaPredicted RBP9.98□□□□□ -0.81
SYNPO2-204ENST00000448416 CASP4P49662 377 aa9.98□□□□□ -0.81
SYNPO2-204ENST00000448416 MAPK6Q16659 721 aa9.98□□□□□ -0.81
SYNPO2-204ENST00000448416 RIPOR1Q6ZS17 1223 aa9.98□□□□□ -0.81
SYNPO2-204ENST00000448416 NCCRP1Q6ZVX7 275 aaPredicted RBP9.98□□□□□ -0.81
SYNPO2-204ENST00000448416 C12orf50Q8NA57 414 aaPredicted RBP9.98□□□□□ -0.81
SYNPO2-204ENST00000448416 PRR11Q96HE9 360 aaPredicted RBP9.98□□□□□ -0.81
SYNPO2-204ENST00000448416 ARHGEF38Q9NXL2 777 aa9.98□□□□□ -0.81
SYNPO2-204ENST00000448416 ASAP1Q9ULH1 1129 aa9.98□□□□□ -0.81
SYNPO2-204ENST00000448416 STX8Q9UNK0 236 aa9.98□□□□□ -0.81
SYNPO2-204ENST00000448416 KIAA1024Q9UPX6 916 aa9.98□□□□□ -0.81
SYNPO2-204ENST00000448416 GLI3P10071 1580 aa9.97□□□□□ -0.81
SYNPO2-204ENST00000448416 ZBED4O75132 1171 aa9.97□□□□□ -0.81
SYNPO2-204ENST00000448416 E2F6O75461 281 aa9.97□□□□□ -0.81
SYNPO2-204ENST00000448416 CASP5P51878 434 aa9.97□□□□□ -0.81
SYNPO2-204ENST00000448416 RAP1GDS1P52306 607 aa9.97□□□□□ -0.81
SYNPO2-204ENST00000448416 SLC18A1P54219 525 aa9.97□□□□□ -0.81
SYNPO2-204ENST00000448416 DCTN2Q13561 401 aaKnown RBP9.97□□□□□ -0.81
SYNPO2-204ENST00000448416 KNOP1Q1ED39 458 aaKnown RBP9.97□□□□□ -0.81
SYNPO2-204ENST00000448416 CCDC92Q53HC0 331 aaPredicted RBP9.97□□□□□ -0.81
SYNPO2-204ENST00000448416 DCP1AQ9NPI6 582 aaPredicted RBP9.97□□□□□ -0.81
SYNPO2-204ENST00000448416 IL17RBQ9NRM6 502 aa9.97□□□□□ -0.81
SYNPO2-204ENST00000448416 SENP1Q9P0U3 644 aa9.97□□□□□ -0.81
SYNPO2-204ENST00000448416 ZNF24P17028 368 aa9.97□□□□□ -0.81
SYNPO2-204ENST00000448416 IVDP26440 423 aa9.97□□□□□ -0.81
SYNPO2-204ENST00000448416 GPC5P78333 572 aa9.97□□□□□ -0.81
SYNPO2-204ENST00000448416 RASA3Q14644 834 aa9.97□□□□□ -0.81
SYNPO2-204ENST00000448416 TRMT5Q32P41 509 aaKnown RBP9.97□□□□□ -0.81
SYNPO2-204ENST00000448416 C1orf146Q5VVC0 180 aa9.97□□□□□ -0.81
SYNPO2-204ENST00000448416 TBC1D9BQ66K14 1250 aa9.97□□□□□ -0.81
SYNPO2-204ENST00000448416 C1orf228Q6PIY5 440 aa9.97□□□□□ -0.81
SYNPO2-204ENST00000448416 ATG4AQ8WYN0 398 aa9.97□□□□□ -0.81
SYNPO2-204ENST00000448416 IRGQQ8WZA9 623 aa9.97□□□□□ -0.81
SYNPO2-204ENST00000448416 SLC35B4Q969S0 331 aa9.97□□□□□ -0.81
SYNPO2-204ENST00000448416 MAML3Q96JK9 1138 aa9.97□□□□□ -0.81
SYNPO2-204ENST00000448416 PPM1HQ9ULR3 514 aa9.97□□□□□ -0.81
SYNPO2-204ENST00000448416 H3BRJ5 948 aa9.97□□□□□ -0.81
SYNPO2-204ENST00000448416 CLIC2O15247 247 aa9.97□□□□□ -0.81
SYNPO2-204ENST00000448416 MAGEC1O60732 1142 aa9.97□□□□□ -0.81
SYNPO2-204ENST00000448416 CDK4P11802 303 aa9.97□□□□□ -0.81
SYNPO2-204ENST00000448416 GJA8P48165 433 aa9.97□□□□□ -0.81
SYNPO2-204ENST00000448416 HADHBP55084 474 aaKnown RBP9.97□□□□□ -0.81
SYNPO2-204ENST00000448416 TRIM67Q6ZTA4 783 aa9.97□□□□□ -0.81
SYNPO2-204ENST00000448416 RAPH1Q70E73 1250 aa9.97□□□□□ -0.81
SYNPO2-204ENST00000448416 NET1Q7Z628 596 aaPredicted RBP9.97□□□□□ -0.81
SYNPO2-204ENST00000448416 LRRC43Q8N309 656 aa9.97□□□□□ -0.81
SYNPO2-204ENST00000448416 CFAP57Q96MR6 1250 aa9.97□□□□□ -0.81
SYNPO2-204ENST00000448416 CRNKL1Q9BZJ0 848 aaKnown RBP9.97□□□□□ -0.81
SYNPO2-204ENST00000448416 TSPYL2Q9H2G4 693 aaPredicted RBP9.97□□□□□ -0.81
SYNPO2-204ENST00000448416 EPB41L1Q9H4G0 881 aa9.97□□□□□ -0.81
SYNPO2-204ENST00000448416 CHST7Q9NS84 486 aa9.97□□□□□ -0.81
SYNPO2-204ENST00000448416 RREB1Q92766 1687 aa9.97□□□□□ -0.81
SYNPO2-204ENST00000448416 KIF13AQ9H1H9 1805 aa9.97□□□□□ -0.81
SYNPO2-204ENST00000448416 BTBD19C9JJ37 291 aa9.96□□□□□ -0.81
SYNPO2-204ENST00000448416 UQCRBP14927 111 aa9.96□□□□□ -0.81
SYNPO2-204ENST00000448416 MAGEA4P43358 317 aa9.96□□□□□ -0.81
SYNPO2-204ENST00000448416 COG7P83436 770 aa9.96□□□□□ -0.81
SYNPO2-204ENST00000448416 CDK16Q00536 496 aa9.96□□□□□ -0.81
SYNPO2-204ENST00000448416 MMEL1Q495T6 779 aa9.96□□□□□ -0.81
SYNPO2-204ENST00000448416 SH3D19Q5HYK7 790 aa9.96□□□□□ -0.81
SYNPO2-204ENST00000448416 TMPRSS6Q8IU80 811 aa9.96□□□□□ -0.81
SYNPO2-204ENST00000448416 SLCO2A1Q92959 643 aa9.96□□□□□ -0.81
SYNPO2-204ENST00000448416 GJA10Q969M2 543 aa9.96□□□□□ -0.81
SYNPO2-204ENST00000448416 ORAI2Q96SN7 254 aa9.96□□□□□ -0.81
SYNPO2-204ENST00000448416 THTPAQ9BU02 230 aa9.96□□□□□ -0.81
SYNPO2-204ENST00000448416 PLVAPQ9BX97 442 aa9.96□□□□□ -0.81
SYNPO2-204ENST00000448416 DNAJB4Q9UDY4 337 aa9.96□□□□□ -0.81
SYNPO2-204ENST00000448416 MTO1Q9Y2Z2 717 aaKnown RBP9.96□□□□□ -0.81
SYNPO2-204ENST00000448416 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.96□□□□□ -0.81
SYNPO2-204ENST00000448416 LRRN2O75325 713 aa9.96□□□□□ -0.81
SYNPO2-204ENST00000448416 NR3C1P04150 777 aa9.96□□□□□ -0.81
SYNPO2-204ENST00000448416 MLH1P40692 756 aa9.96□□□□□ -0.81
SYNPO2-204ENST00000448416 PTK6Q13882 451 aa9.96□□□□□ -0.81
SYNPO2-204ENST00000448416 HNRNPDQ14103 355 aaKnown RBP9.96□□□□□ -0.81
SYNPO2-204ENST00000448416 KRT72Q14CN4 511 aa9.96□□□□□ -0.81
SYNPO2-204ENST00000448416 CAPN12Q6ZSI9 719 aa9.96□□□□□ -0.81
SYNPO2-204ENST00000448416 PDSS2Q86YH6 399 aa9.96□□□□□ -0.81
SYNPO2-204ENST00000448416 CPNE8Q86YQ8 564 aa9.96□□□□□ -0.81
SYNPO2-204ENST00000448416 PANX3Q96QZ0 392 aa9.96□□□□□ -0.81
SYNPO2-204ENST00000448416 UIMC1Q96RL1 719 aa9.96□□□□□ -0.81
SYNPO2-204ENST00000448416 TMEM120AQ9BXJ8 343 aa9.96□□□□□ -0.81
SYNPO2-204ENST00000448416 ARMCX1Q9P291 453 aa9.96□□□□□ -0.81
SYNPO2-204ENST00000448416 GTPBP10A4D1E9 387 aaKnown RBP9.96□□□□□ -0.82
SYNPO2-204ENST00000448416 USP17L3A6NCW0 530 aa9.96□□□□□ -0.82
SYNPO2-204ENST00000448416 USP17L4A6NCW7 530 aa9.96□□□□□ -0.82
SYNPO2-204ENST00000448416 VILLO15195 856 aa9.96□□□□□ -0.82
SYNPO2-204ENST00000448416 SORBS3O60504 671 aa9.96□□□□□ -0.82
SYNPO2-204ENST00000448416 CYP11B2P19099 503 aa9.96□□□□□ -0.82
SYNPO2-204ENST00000448416 SERPINB8P50452 374 aa9.96□□□□□ -0.82
SYNPO2-204ENST00000448416 HSP90AA5PQ58FG0 334 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms