RNA–Protein interactions for RNA: ENST00000447641.5

SREBF1-207, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 644 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-207ENST00000447641 GLRA4Q5JXX5 417 aa15.36■□□□□ 0.05
SREBF1-207ENST00000447641 CCDC183Q5T5S1 534 aa15.36■□□□□ 0.05
SREBF1-207ENST00000447641 CD300LGQ6UXG3 332 aa15.36■□□□□ 0.05
SREBF1-207ENST00000447641 CCDC47Q96A33 483 aaKnown RBP15.36■□□□□ 0.05
SREBF1-207ENST00000447641 TMEM169Q96HH4 297 aa15.36■□□□□ 0.05
SREBF1-207ENST00000447641 COLEC11Q9BWP8 271 aa15.36■□□□□ 0.05
SREBF1-207ENST00000447641 ASB7Q9H672 318 aa15.36■□□□□ 0.05
SREBF1-207ENST00000447641 AGPAT3Q9NRZ7 376 aa15.36■□□□□ 0.05
SREBF1-207ENST00000447641 CLDND1Q9NY35 253 aa15.36■□□□□ 0.05
SREBF1-207ENST00000447641 CACNG4Q9UBN1 327 aa15.36■□□□□ 0.05
SREBF1-207ENST00000447641 HOOK1Q9UJC3 728 aaKnown RBP15.36■□□□□ 0.05
SREBF1-207ENST00000447641 DERAQ9Y315 318 aa15.36■□□□□ 0.05
SREBF1-207ENST00000447641 TBX10O75333 385 aa15.35■□□□□ 0.05
SREBF1-207ENST00000447641 GTF2F1P35269 517 aaKnown RBP eCLIP15.35■□□□□ 0.051e-8■■■■■ 169.5
SREBF1-207ENST00000447641 HYAL1Q12794 435 aa15.35■□□□□ 0.05
SREBF1-207ENST00000447641 HSP90AA2PQ14568 343 aaPredicted RBP15.35■□□□□ 0.05
SREBF1-207ENST00000447641 COBLL1Q53SF7 1204 aa15.35■□□□□ 0.05
SREBF1-207ENST00000447641 ARMCX5Q6P1M9 558 aa15.35■□□□□ 0.05
SREBF1-207ENST00000447641 NELFCDQ8IXH7 590 aa15.35■□□□□ 0.05
SREBF1-207ENST00000447641 C18orf25Q96B23 403 aaPredicted RBP15.35■□□□□ 0.05
SREBF1-207ENST00000447641 DDX27Q96GQ7 796 aaKnown RBP15.35■□□□□ 0.05
SREBF1-207ENST00000447641 UROC1Q96N76 676 aa15.35■□□□□ 0.05
SREBF1-207ENST00000447641 FAM213AQ9BRX8 229 aa15.35■□□□□ 0.05
SREBF1-207ENST00000447641 DMAC2Q9NW81 257 aa15.35■□□□□ 0.05
SREBF1-207ENST00000447641 PRKAG3Q9UGI9 489 aa15.35■□□□□ 0.05
SREBF1-207ENST00000447641 PRG3Q9Y2Y8 225 aaPredicted RBP15.35■□□□□ 0.05
SREBF1-207ENST00000447641 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.35■□□□□ 0.05
SREBF1-207ENST00000447641 IRAK3Q9Y616 596 aa15.35■□□□□ 0.05
SREBF1-207ENST00000447641 CASTOR2A6NHX0 329 aa15.34■□□□□ 0.05
SREBF1-207ENST00000447641 PDXKO00764 312 aa15.34■□□□□ 0.05
SREBF1-207ENST00000447641 MBTPS2O43462 519 aa15.34■□□□□ 0.05
SREBF1-207ENST00000447641 LILRB3O75022 631 aa15.34■□□□□ 0.05
SREBF1-207ENST00000447641 IL18RAPO95256 599 aa15.34■□□□□ 0.05
SREBF1-207ENST00000447641 SMC2O95347 1197 aa15.34■□□□□ 0.05
SREBF1-207ENST00000447641 CTSAP10619 480 aa15.34■□□□□ 0.05
SREBF1-207ENST00000447641 CYP3A5P20815 502 aa15.34■□□□□ 0.05
SREBF1-207ENST00000447641 IGFBP6P24592 240 aaPredicted RBP15.34■□□□□ 0.05
SREBF1-207ENST00000447641 RPL9P32969 192 aaKnown RBP15.34■□□□□ 0.05
SREBF1-207ENST00000447641 WNT7BP56706 349 aa15.34■□□□□ 0.05
SREBF1-207ENST00000447641 PPP2R3AQ06190 1150 aa15.34■□□□□ 0.05
SREBF1-207ENST00000447641 SMAD2Q15796 467 aaKnown RBP15.34■□□□□ 0.05
SREBF1-207ENST00000447641 CLUL1Q15846 466 aa15.34■□□□□ 0.05
SREBF1-207ENST00000447641 CAVIN1Q6NZI2 390 aaKnown RBP15.34■□□□□ 0.05
SREBF1-207ENST00000447641 DCLRE1AQ6PJP8 1040 aa15.34■□□□□ 0.05
SREBF1-207ENST00000447641 TAS1R1Q7RTX1 841 aa15.34■□□□□ 0.05
SREBF1-207ENST00000447641 SLC9A9Q8IVB4 645 aa15.34■□□□□ 0.05
SREBF1-207ENST00000447641 BRSK2Q8IWQ3 736 aa15.34■□□□□ 0.05
SREBF1-207ENST00000447641 VPS52Q8N1B4 723 aa15.34■□□□□ 0.05
SREBF1-207ENST00000447641 GPD1LQ8N335 351 aa15.34■□□□□ 0.05
SREBF1-207ENST00000447641 GUF1Q8N442 669 aaKnown RBP15.34■□□□□ 0.05
SREBF1-207ENST00000447641 MRPL43Q8N983 215 aaKnown RBP15.34■□□□□ 0.05
SREBF1-207ENST00000447641 PRSS33Q8NF86 280 aa15.34■□□□□ 0.05
SREBF1-207ENST00000447641 GOLGA5Q8TBA6 731 aa15.34■□□□□ 0.05
SREBF1-207ENST00000447641 RABGGTAQ92696 567 aa15.34■□□□□ 0.05
SREBF1-207ENST00000447641 ERCC4Q92889 916 aaPredicted RBP15.34■□□□□ 0.05
SREBF1-207ENST00000447641 SAAL1Q96ER3 474 aa15.34■□□□□ 0.05
SREBF1-207ENST00000447641 GTPBP4Q9BZE4 634 aaKnown RBP15.34■□□□□ 0.05
SREBF1-207ENST00000447641 GPR62Q9BZJ7 368 aa15.34■□□□□ 0.05
SREBF1-207ENST00000447641 ZBP1Q9H171 429 aa15.34■□□□□ 0.05
SREBF1-207ENST00000447641 KCNH6Q9H252 994 aa15.34■□□□□ 0.05
SREBF1-207ENST00000447641 PCIF1Q9H4Z3 704 aa15.34■□□□□ 0.05
SREBF1-207ENST00000447641 GOLGA2P5Q9HBQ8 144 aa15.34■□□□□ 0.05
SREBF1-207ENST00000447641 KIAA1586Q9HCI6 787 aa15.34■□□□□ 0.05
SREBF1-207ENST00000447641 NGRNQ9NPE2 291 aaKnown RBP15.34■□□□□ 0.05
SREBF1-207ENST00000447641 CHST7Q9NS84 486 aa15.34■□□□□ 0.05
SREBF1-207ENST00000447641 RMND1Q9NWS8 449 aa15.34■□□□□ 0.05
SREBF1-207ENST00000447641 HSPBP1Q9NZL4 362 aa15.34■□□□□ 0.05
SREBF1-207ENST00000447641 MUTYHQ9UIF7 546 aa15.34■□□□□ 0.05
SREBF1-207ENST00000447641 ADAM28Q9UKQ2 775 aa15.34■□□□□ 0.05
SREBF1-207ENST00000447641 PCDHGC5Q9Y5F6 944 aa15.34■□□□□ 0.05
SREBF1-207ENST00000447641 PLXNA3P51805 1871 aa15.33■□□□□ 0.05
SREBF1-207ENST00000447641 LINC01565O15544 149 aa15.33■□□□□ 0.04
SREBF1-207ENST00000447641 KIF4AO95239 1232 aa15.33■□□□□ 0.04
SREBF1-207ENST00000447641 LRPAP1P30533 357 aa15.33■□□□□ 0.04
SREBF1-207ENST00000447641 CLCNKBP51801 687 aa15.33■□□□□ 0.04
SREBF1-207ENST00000447641 SPAG1Q07617 926 aa15.33■□□□□ 0.04
SREBF1-207ENST00000447641 ZNF658Q5TYW1 1059 aaPredicted RBP15.33■□□□□ 0.04
SREBF1-207ENST00000447641 SPATA1Q5VX52 437 aa15.33■□□□□ 0.04
SREBF1-207ENST00000447641 JADE1Q6IE81 842 aa15.33■□□□□ 0.04
SREBF1-207ENST00000447641 EP400NLQ6ZTU2 488 aa15.33■□□□□ 0.04
SREBF1-207ENST00000447641 HS2ST1Q7LGA3 356 aa15.33■□□□□ 0.04
SREBF1-207ENST00000447641 GPR65Q8IYL9 337 aa15.33■□□□□ 0.04
SREBF1-207ENST00000447641 GPT2Q8TD30 523 aa15.33■□□□□ 0.04
SREBF1-207ENST00000447641 SMARCE1Q969G3 411 aa15.33■□□□□ 0.04
SREBF1-207ENST00000447641 KIF12Q96FN5 646 aa15.33■□□□□ 0.04
SREBF1-207ENST00000447641 TCF25Q9BQ70 676 aa15.33■□□□□ 0.04
SREBF1-207ENST00000447641 TRAF3IP3Q9Y228 551 aa15.33■□□□□ 0.04
SREBF1-207ENST00000447641 C2CD2Q9Y426 696 aa15.33■□□□□ 0.04
SREBF1-207ENST00000447641 GOLGA8IPA6NC78 632 aa15.32■□□□□ 0.04
SREBF1-207ENST00000447641 C2orf71A6NGG8 1288 aa15.32■□□□□ 0.04
SREBF1-207ENST00000447641 GOLGA8JA6NMD2 632 aa15.32■□□□□ 0.04
SREBF1-207ENST00000447641 CLIC2O15247 247 aa15.32■□□□□ 0.04
SREBF1-207ENST00000447641 TADA2AO75478 443 aa15.32■□□□□ 0.04
SREBF1-207ENST00000447641 KIF20AO95235 890 aa15.32■□□□□ 0.04
SREBF1-207ENST00000447641 CXCL14O95715 111 aa15.32■□□□□ 0.04
SREBF1-207ENST00000447641 SOD2P04179 222 aa15.32■□□□□ 0.04
SREBF1-207ENST00000447641 NFICP08651 508 aa15.32■□□□□ 0.04
SREBF1-207ENST00000447641 MYBPC2Q14324 1141 aa15.32■□□□□ 0.04
SREBF1-207ENST00000447641 SMC1AQ14683 1233 aaKnown RBP15.32■□□□□ 0.04
SREBF1-207ENST00000447641 NFIL3Q16649 462 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms