RNA–Protein interactions for RNA: ENST00000443563.5

HDAC6-211, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-211ENST00000443563 SLC9A9Q8IVB4 645 aa11.75□□□□□ -0.53
HDAC6-211ENST00000443563 RNF168Q8IYW5 571 aaPredicted RBP11.75□□□□□ -0.53
HDAC6-211ENST00000443563 HLA-CQ95604 372 aa11.75□□□□□ -0.53
HDAC6-211ENST00000443563 C18orf25Q96B23 403 aaPredicted RBP11.75□□□□□ -0.53
HDAC6-211ENST00000443563 PAAF1Q9BRP4 392 aa11.75□□□□□ -0.53
HDAC6-211ENST00000443563 KCTD10Q9H3F6 313 aa11.75□□□□□ -0.53
HDAC6-211ENST00000443563 GOLGA2P5Q9HBQ8 144 aa11.75□□□□□ -0.53
HDAC6-211ENST00000443563 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.75□□□□□ -0.53
HDAC6-211ENST00000443563 NUB1Q9Y5A7 615 aa11.75□□□□□ -0.53
HDAC6-211ENST00000443563 PCDHA5Q9Y5H7 936 aa11.75□□□□□ -0.53
HDAC6-211ENST00000443563 GOLGA8IPA6NC78 632 aa11.74□□□□□ -0.53
HDAC6-211ENST00000443563 C2orf71A6NGG8 1288 aa11.74□□□□□ -0.53
HDAC6-211ENST00000443563 GOLGA8JA6NMD2 632 aa11.74□□□□□ -0.53
HDAC6-211ENST00000443563 EXOC3O60645 756 aa11.74□□□□□ -0.53
HDAC6-211ENST00000443563 EFEMP2O95967 443 aa11.74□□□□□ -0.53
HDAC6-211ENST00000443563 RPL13P26373 211 aaKnown RBP11.74□□□□□ -0.53
HDAC6-211ENST00000443563 NRIP1P48552 1158 aa11.74□□□□□ -0.53
HDAC6-211ENST00000443563 CYP2J2P51589 502 aa11.74□□□□□ -0.53
HDAC6-211ENST00000443563 DSG1Q02413 1049 aa11.74□□□□□ -0.53
HDAC6-211ENST00000443563 SPAG1Q07617 926 aa11.74□□□□□ -0.53
HDAC6-211ENST00000443563 HYAL1Q12794 435 aa11.74□□□□□ -0.53
HDAC6-211ENST00000443563 SNRNP35Q16560 246 aaKnown RBP11.74□□□□□ -0.53
HDAC6-211ENST00000443563 NFIL3Q16649 462 aa11.74□□□□□ -0.53
HDAC6-211ENST00000443563 DUSP6Q16828 381 aa11.74□□□□□ -0.53
HDAC6-211ENST00000443563 AAK1Q2M2I8 961 aa11.74□□□□□ -0.53
HDAC6-211ENST00000443563 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.74□□□□□ -0.53
HDAC6-211ENST00000443563 PPFIBP1Q86W92 1011 aa11.74□□□□□ -0.53
HDAC6-211ENST00000443563 EFHBQ8N7U6 833 aa11.74□□□□□ -0.53
HDAC6-211ENST00000443563 HASPINQ8TF76 798 aa11.74□□□□□ -0.53
HDAC6-211ENST00000443563 RABGGTAQ92696 567 aa11.74□□□□□ -0.53
HDAC6-211ENST00000443563 PABPC5Q96DU9 382 aaKnown RBP11.74□□□□□ -0.53
HDAC6-211ENST00000443563 FBXL18Q96ME1 805 aa11.74□□□□□ -0.53
HDAC6-211ENST00000443563 TTPALQ9BTX7 342 aa11.74□□□□□ -0.53
HDAC6-211ENST00000443563 VN1R3Q9BXE9 311 aa11.74□□□□□ -0.53
HDAC6-211ENST00000443563 GPR62Q9BZJ7 368 aa11.74□□□□□ -0.53
HDAC6-211ENST00000443563 IGFLR1Q9H665 355 aa11.74□□□□□ -0.53
HDAC6-211ENST00000443563 CHST7Q9NS84 486 aa11.74□□□□□ -0.53
HDAC6-211ENST00000443563 THEGQ9P2T0 379 aa11.74□□□□□ -0.53
HDAC6-211ENST00000443563 TUBGCP4Q9UGJ1 667 aa11.74□□□□□ -0.53
HDAC6-211ENST00000443563 TRAF3IP3Q9Y228 551 aa11.74□□□□□ -0.53
HDAC6-211ENST00000443563 R3HCC1Q9Y3T6 440 aaKnown RBP11.74□□□□□ -0.53
HDAC6-211ENST00000443563 ARHGEF37A1IGU5 675 aa11.73□□□□□ -0.53
HDAC6-211ENST00000443563 HIDE1A8MVS5 230 aa11.73□□□□□ -0.53
HDAC6-211ENST00000443563 F8W810 466 aa11.73□□□□□ -0.53
HDAC6-211ENST00000443563 TULP1O00294 542 aaPredicted RBP11.73□□□□□ -0.53
HDAC6-211ENST00000443563 ADH1AP07327 375 aa11.73□□□□□ -0.53
HDAC6-211ENST00000443563 NFICP08651 508 aa11.73□□□□□ -0.53
HDAC6-211ENST00000443563 TMEM191BP0C7N4 346 aa11.73□□□□□ -0.53
HDAC6-211ENST00000443563 COL19A1Q14993 1142 aa11.73□□□□□ -0.53
HDAC6-211ENST00000443563 PTPN14Q15678 1187 aa11.73□□□□□ -0.53
HDAC6-211ENST00000443563 FAM171A1Q5VUB5 890 aa11.73□□□□□ -0.53
HDAC6-211ENST00000443563 KIAA0319Q5VV43 1072 aa11.73□□□□□ -0.53
HDAC6-211ENST00000443563 ELMSAN1Q6PJG2 1045 aa11.73□□□□□ -0.53
HDAC6-211ENST00000443563 ADGRD2Q7Z7M1 963 aa11.73□□□□□ -0.53
HDAC6-211ENST00000443563 USP37Q86T82 979 aa11.73□□□□□ -0.53
HDAC6-211ENST00000443563 RBM23Q86U06 439 aaKnown RBP11.73□□□□□ -0.53
HDAC6-211ENST00000443563 ANKRD36BP1Q96IX9 119 aa11.73□□□□□ -0.53
HDAC6-211ENST00000443563 FNBP1Q96RU3 617 aa11.73□□□□□ -0.53
HDAC6-211ENST00000443563 TSG101Q99816 390 aa11.73□□□□□ -0.53
HDAC6-211ENST00000443563 SPTBN5Q9NRC6 3674 aaKnown RBP11.73□□□□□ -0.53
HDAC6-211ENST00000443563 LMBRD1Q9NUN5 540 aa11.73□□□□□ -0.53
HDAC6-211ENST00000443563 DMAC2Q9NW81 257 aa11.73□□□□□ -0.53
HDAC6-211ENST00000443563 DPP3Q9NY33 737 aa11.73□□□□□ -0.53
HDAC6-211ENST00000443563 CLDND1Q9NY35 253 aa11.73□□□□□ -0.53
HDAC6-211ENST00000443563 FNIP2Q9P278 1114 aa11.73□□□□□ -0.53
HDAC6-211ENST00000443563 CACNG4Q9UBN1 327 aa11.73□□□□□ -0.53
HDAC6-211ENST00000443563 DPP7Q9UHL4 492 aa11.73□□□□□ -0.53
HDAC6-211ENST00000443563 MAPK8IP1Q9UQF2 711 aa11.73□□□□□ -0.53
HDAC6-211ENST00000443563 FRMD4BQ9Y2L6 1034 aa11.73□□□□□ -0.53
HDAC6-211ENST00000443563 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.72□□□□□ -0.53
HDAC6-211ENST00000443563 C2CD2LO14523 706 aa11.72□□□□□ -0.53
HDAC6-211ENST00000443563 SYN3O14994 580 aa11.72□□□□□ -0.53
HDAC6-211ENST00000443563 LILRB3O75022 631 aa11.72□□□□□ -0.53
HDAC6-211ENST00000443563 C1RP00736 705 aa11.72□□□□□ -0.53
HDAC6-211ENST00000443563 TNNC2P02585 160 aa11.72□□□□□ -0.53
HDAC6-211ENST00000443563 NR3C1P04150 777 aa11.72□□□□□ -0.53
HDAC6-211ENST00000443563 KLRC2P26717 231 aa11.72□□□□□ -0.53
HDAC6-211ENST00000443563 MCM4P33991 863 aa11.72□□□□□ -0.53
HDAC6-211ENST00000443563 PNPLA4P41247 253 aa11.72□□□□□ -0.53
HDAC6-211ENST00000443563 NDUFV1P49821 464 aa11.72□□□□□ -0.53
HDAC6-211ENST00000443563 TFAMQ00059 246 aaKnown RBP11.72□□□□□ -0.53
HDAC6-211ENST00000443563 CYP24A1Q07973 514 aa11.72□□□□□ -0.53
HDAC6-211ENST00000443563 ADAM15Q13444 863 aa11.72□□□□□ -0.53
HDAC6-211ENST00000443563 PSMD6Q15008 389 aa11.72□□□□□ -0.53
HDAC6-211ENST00000443563 DUOXA2Q1HG44 320 aa11.72□□□□□ -0.53
HDAC6-211ENST00000443563 CTC1Q2NKJ3 1217 aa11.72□□□□□ -0.53
HDAC6-211ENST00000443563 EDRF1Q3B7T1 1238 aa11.72□□□□□ -0.53
HDAC6-211ENST00000443563 EP400NLQ6ZTU2 488 aa11.72□□□□□ -0.53
HDAC6-211ENST00000443563 TAS1R1Q7RTX1 841 aa11.72□□□□□ -0.53
HDAC6-211ENST00000443563 CEP57Q86XR8 500 aa11.72□□□□□ -0.53
HDAC6-211ENST00000443563 CBWD2Q8IUF1 395 aa11.72□□□□□ -0.53
HDAC6-211ENST00000443563 WDR49Q8IV35 697 aa11.72□□□□□ -0.53
HDAC6-211ENST00000443563 TRIML1Q8N9V2 468 aa11.72□□□□□ -0.53
HDAC6-211ENST00000443563 RDH13Q8NBN7 331 aa11.72□□□□□ -0.53
HDAC6-211ENST00000443563 C3orf58Q8NDZ4 430 aa11.72□□□□□ -0.53
HDAC6-211ENST00000443563 ZSWIM2Q8NEG5 633 aa11.72□□□□□ -0.53
HDAC6-211ENST00000443563 APPL2Q8NEU8 664 aa11.72□□□□□ -0.53
HDAC6-211ENST00000443563 ATXN2LQ8WWM7 1075 aaKnown RBP11.72□□□□□ -0.53
HDAC6-211ENST00000443563 RIN2Q8WYP3 895 aaPredicted RBP11.72□□□□□ -0.53
HDAC6-211ENST00000443563 PIK3R5Q8WYR1 880 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms