RNA–Protein interactions for RNA: ENST00000442691.6

NR1I3-211, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 1,114 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-211ENST00000442691 WDR44Q5JSH3 913 aa9.8□□□□□ -0.84
NR1I3-211ENST00000442691 EEF1DP3Q658K8 133 aa9.8□□□□□ -0.84
NR1I3-211ENST00000442691 E4F1Q66K89 784 aaPredicted RBP9.8□□□□□ -0.84
NR1I3-211ENST00000442691 HGSNATQ68CP4 663 aa9.8□□□□□ -0.84
NR1I3-211ENST00000442691 GDF6Q6KF10 455 aaPredicted RBP9.8□□□□□ -0.84
NR1I3-211ENST00000442691 HACE1Q8IYU2 909 aa9.8□□□□□ -0.84
NR1I3-211ENST00000442691 CCDC155Q8N6L0 562 aa9.8□□□□□ -0.84
NR1I3-211ENST00000442691 SHC3Q92529 594 aa9.8□□□□□ -0.84
NR1I3-211ENST00000442691 CCDC127Q96BQ5 260 aa9.8□□□□□ -0.84
NR1I3-211ENST00000442691 ANKRD36BP1Q96IX9 119 aa9.8□□□□□ -0.84
NR1I3-211ENST00000442691 ZBTB45Q96K62 511 aaPredicted RBP9.8□□□□□ -0.84
NR1I3-211ENST00000442691 CCDC42Q96M95 316 aa9.8□□□□□ -0.84
NR1I3-211ENST00000442691 VRTNQ9H8Y1 702 aa9.8□□□□□ -0.84
NR1I3-211ENST00000442691 PDE11AQ9HCR9 933 aa9.8□□□□□ -0.84
NR1I3-211ENST00000442691 C1orf112Q9NSG2 853 aa9.8□□□□□ -0.84
NR1I3-211ENST00000442691 MYO1AQ9UBC5 1043 aa9.8□□□□□ -0.84
NR1I3-211ENST00000442691 OGDHLQ9ULD0 1010 aa9.8□□□□□ -0.84
NR1I3-211ENST00000442691 EPN1Q9Y6I3 576 aaPredicted RBP9.8□□□□□ -0.84
NR1I3-211ENST00000442691 MROH7Q68CQ1 1323 aa9.8□□□□□ -0.84
NR1I3-211ENST00000442691 FRMPD3Q5JV73 1810 aa9.79□□□□□ -0.84
NR1I3-211ENST00000442691 A0A1W2PQ45 241 aaPredicted RBP9.79□□□□□ -0.84
NR1I3-211ENST00000442691 A0A1W2PQY0 241 aa9.79□□□□□ -0.84
NR1I3-211ENST00000442691 GPR182O15218 404 aa9.79□□□□□ -0.84
NR1I3-211ENST00000442691 TMEM191BP0C7N4 346 aa9.79□□□□□ -0.84
NR1I3-211ENST00000442691 STAG3L1P0CL83 205 aa9.79□□□□□ -0.84
NR1I3-211ENST00000442691 SKIP12755 728 aa9.79□□□□□ -0.84
NR1I3-211ENST00000442691 ATICP31939 592 aa9.79□□□□□ -0.84
NR1I3-211ENST00000442691 SOX5P35711 763 aa9.79□□□□□ -0.84
NR1I3-211ENST00000442691 RAB27AP51159 221 aa9.79□□□□□ -0.84
NR1I3-211ENST00000442691 YARSP54577 528 aaKnown RBP9.79□□□□□ -0.84
NR1I3-211ENST00000442691 HTRA3P83110 453 aa9.79□□□□□ -0.84
NR1I3-211ENST00000442691 RAPGEF1Q13905 1077 aa9.79□□□□□ -0.84
NR1I3-211ENST00000442691 BMS1Q14692 1282 aaKnown RBP9.79□□□□□ -0.84
NR1I3-211ENST00000442691 ASIC2Q16515 512 aa9.79□□□□□ -0.84
NR1I3-211ENST00000442691 PTGISQ16647 500 aa9.79□□□□□ -0.84
NR1I3-211ENST00000442691 PTPN21Q16825 1174 aa9.79□□□□□ -0.84
NR1I3-211ENST00000442691 ASTE1Q2TB18 679 aaPredicted RBP9.79□□□□□ -0.84
NR1I3-211ENST00000442691 IQCEQ6IPM2 695 aa9.79□□□□□ -0.84
NR1I3-211ENST00000442691 TTC39CQ8N584 583 aa9.79□□□□□ -0.84
NR1I3-211ENST00000442691 ZSWIM2Q8NEG5 633 aa9.79□□□□□ -0.84
NR1I3-211ENST00000442691 CAGE1Q8TC20 777 aa9.79□□□□□ -0.84
NR1I3-211ENST00000442691 RSPH1Q8WYR4 309 aa9.79□□□□□ -0.84
NR1I3-211ENST00000442691 ZBTB10Q96DT7 871 aa9.79□□□□□ -0.84
NR1I3-211ENST00000442691 OSMRQ99650 979 aa9.79□□□□□ -0.84
NR1I3-211ENST00000442691 PRR14Q9BWN1 585 aa9.79□□□□□ -0.84
NR1I3-211ENST00000442691 TSGA10Q9BZW7 698 aa9.79□□□□□ -0.84
NR1I3-211ENST00000442691 HAUS4Q9H6D7 363 aa9.79□□□□□ -0.84
NR1I3-211ENST00000442691 NHEJ1Q9H9Q4 299 aaPredicted RBP9.79□□□□□ -0.84
NR1I3-211ENST00000442691 NLRC4Q9NPP4 1024 aa9.79□□□□□ -0.84
NR1I3-211ENST00000442691 DNAJC12Q9UKB3 198 aa9.79□□□□□ -0.84
NR1I3-211ENST00000442691 ITGA11Q9UKX5 1188 aa9.79□□□□□ -0.84
NR1I3-211ENST00000442691 PPP2R2CQ9Y2T4 447 aa9.79□□□□□ -0.84
NR1I3-211ENST00000442691 FHOD1Q9Y613 1164 aa9.79□□□□□ -0.84
NR1I3-211ENST00000442691 GRIN2DO15399 1336 aa9.79□□□□□ -0.84
NR1I3-211ENST00000442691 KAT6AQ92794 2004 aa9.78□□□□□ -0.84
NR1I3-211ENST00000442691 SOWAHDA6NJG2 315 aa9.78□□□□□ -0.84
NR1I3-211ENST00000442691 ARVCFO00192 962 aa9.78□□□□□ -0.84
NR1I3-211ENST00000442691 XPOTO43592 962 aaKnown RBP9.78□□□□□ -0.84
NR1I3-211ENST00000442691 PARNO95453 639 aaKnown RBP9.78□□□□□ -0.84
NR1I3-211ENST00000442691 ASS1P00966 412 aaKnown RBP9.78□□□□□ -0.84
NR1I3-211ENST00000442691 HLA-DRAP01903 254 aa9.78□□□□□ -0.84
NR1I3-211ENST00000442691 ACTN1P12814 892 aa9.78□□□□□ -0.84
NR1I3-211ENST00000442691 PAX3P23760 479 aa9.78□□□□□ -0.84
NR1I3-211ENST00000442691 PIK3CAP42336 1068 aa9.78□□□□□ -0.84
NR1I3-211ENST00000442691 BPIFB4P59827 614 aa9.78□□□□□ -0.84
NR1I3-211ENST00000442691 YWHAEP62258 255 aaKnown RBP9.78□□□□□ -0.84
NR1I3-211ENST00000442691 KLHL30Q0D2K2 578 aa9.78□□□□□ -0.84
NR1I3-211ENST00000442691 NCOA4Q13772 614 aa9.78□□□□□ -0.84
NR1I3-211ENST00000442691 DRAP1Q14919 205 aaPredicted RBP9.78□□□□□ -0.84
NR1I3-211ENST00000442691 SPA17Q15506 151 aa9.78□□□□□ -0.84
NR1I3-211ENST00000442691 SLC18A3Q16572 532 aa9.78□□□□□ -0.84
NR1I3-211ENST00000442691 SGSM1Q2NKQ1 1148 aa9.78□□□□□ -0.84
NR1I3-211ENST00000442691 TRIM71Q2Q1W2 868 aaKnown RBP9.78□□□□□ -0.84
NR1I3-211ENST00000442691 XKR4Q5GH76 650 aa9.78□□□□□ -0.84
NR1I3-211ENST00000442691 C1orf53Q5VUE5 145 aa9.78□□□□□ -0.84
NR1I3-211ENST00000442691 TDRD10Q5VZ19 366 aaKnown RBP9.78□□□□□ -0.84
NR1I3-211ENST00000442691 PHLDB3Q6NSJ2 640 aa9.78□□□□□ -0.84
NR1I3-211ENST00000442691 PPP1R2P3Q6NXS1 205 aa9.78□□□□□ -0.84
NR1I3-211ENST00000442691 RAD9BQ6WBX8 426 aa9.78□□□□□ -0.84
NR1I3-211ENST00000442691 NYAP1Q6ZVC0 841 aa9.78□□□□□ -0.84
NR1I3-211ENST00000442691 TRAPPC11Q7Z392 1133 aa9.78□□□□□ -0.84
NR1I3-211ENST00000442691 IRF2BP2Q7Z5L9 587 aa9.78□□□□□ -0.84
NR1I3-211ENST00000442691 ZBTB33Q86T24 672 aa9.78□□□□□ -0.84
NR1I3-211ENST00000442691 ZNF677Q86XU0 584 aa9.78□□□□□ -0.84
NR1I3-211ENST00000442691 FAM71AQ8IYT1 594 aa9.78□□□□□ -0.84
NR1I3-211ENST00000442691 ANKLE1Q8NAG6 615 aa9.78□□□□□ -0.84
NR1I3-211ENST00000442691 HELQQ8TDG4 1101 aa9.78□□□□□ -0.84
NR1I3-211ENST00000442691 TAS1R2Q8TE23 839 aa9.78□□□□□ -0.84
NR1I3-211ENST00000442691 UBE2Q2Q8WVN8 375 aa9.78□□□□□ -0.84
NR1I3-211ENST00000442691 ZNF516Q92618 1163 aa9.78□□□□□ -0.84
NR1I3-211ENST00000442691 WNT2BQ93097 391 aa9.78□□□□□ -0.84
NR1I3-211ENST00000442691 PPP1R13BQ96KQ4 1090 aa9.78□□□□□ -0.84
NR1I3-211ENST00000442691 CALR3Q96L12 384 aaKnown RBP9.78□□□□□ -0.84
NR1I3-211ENST00000442691 SNX27Q96L92 541 aa9.78□□□□□ -0.84
NR1I3-211ENST00000442691 ACAP3Q96P50 834 aa9.78□□□□□ -0.84
NR1I3-211ENST00000442691 DEF6Q9H4E7 631 aa9.78□□□□□ -0.84
NR1I3-211ENST00000442691 STARD7Q9NQZ5 370 aa9.78□□□□□ -0.84
NR1I3-211ENST00000442691 CNTN3Q9P232 1028 aa9.78□□□□□ -0.84
NR1I3-211ENST00000442691 ARHGAP20Q9P2F6 1191 aa9.78□□□□□ -0.84
NR1I3-211ENST00000442691 INTUQ9ULD6 942 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms