RNA–Protein interactions for RNA: ENST00000442679.5

USP1-203, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 2

Gene USP1, Length 502 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-203ENST00000442679 GUCY2FP51841 1108 aa13.36□□□□□ -0.27
USP1-203ENST00000442679 WNT7BP56706 349 aa13.36□□□□□ -0.27
USP1-203ENST00000442679 TFAMQ00059 246 aaKnown RBP13.36□□□□□ -0.27
USP1-203ENST00000442679 STIM1Q13586 685 aa13.36□□□□□ -0.27
USP1-203ENST00000442679 MYBPC2Q14324 1141 aa13.36□□□□□ -0.27
USP1-203ENST00000442679 SMC1AQ14683 1233 aaKnown RBP13.36□□□□□ -0.27
USP1-203ENST00000442679 SURF1Q15526 300 aa13.36□□□□□ -0.27
USP1-203ENST00000442679 TCEAL5Q5H9L2 206 aa13.36□□□□□ -0.27
USP1-203ENST00000442679 FUT10Q6P4F1 479 aa13.36□□□□□ -0.27
USP1-203ENST00000442679 CD300LGQ6UXG3 332 aa13.36□□□□□ -0.27
USP1-203ENST00000442679 NT5DC4Q86YG4 428 aa13.36□□□□□ -0.27
USP1-203ENST00000442679 EFCAB13Q8IY85 973 aa13.36□□□□□ -0.27
USP1-203ENST00000442679 TMEM130Q8N3G9 435 aa13.36□□□□□ -0.27
USP1-203ENST00000442679 MRPL43Q8N983 215 aaKnown RBP13.36□□□□□ -0.27
USP1-203ENST00000442679 CACTINQ8WUQ7 758 aaKnown RBP13.36□□□□□ -0.27
USP1-203ENST00000442679 AUTS2Q8WXX7 1259 aa13.36□□□□□ -0.27
USP1-203ENST00000442679 HERC2P3Q9BVR0 1158 aa13.36□□□□□ -0.27
USP1-203ENST00000442679 GPR62Q9BZJ7 368 aa13.36□□□□□ -0.27
USP1-203ENST00000442679 ZBP1Q9H171 429 aa13.36□□□□□ -0.27
USP1-203ENST00000442679 COL4A4P53420 1690 aaPredicted RBP13.36□□□□□ -0.27
USP1-203ENST00000442679 SPTBN5Q9NRC6 3674 aaKnown RBP13.36□□□□□ -0.27
USP1-203ENST00000442679 SF3B1O75533 1304 aaKnown RBP eCLIP13.36□□□□□ -0.27
USP1-203ENST00000442679 HIDE1A8MVS5 230 aa13.35□□□□□ -0.27
USP1-203ENST00000442679 TRAPPC3O43617 180 aa13.35□□□□□ -0.27
USP1-203ENST00000442679 MBD3O95983 291 aa13.35□□□□□ -0.27
USP1-203ENST00000442679 CTSAP10619 480 aa13.35□□□□□ -0.27
USP1-203ENST00000442679 CD44P16070 742 aaKnown RBP13.35□□□□□ -0.27
USP1-203ENST00000442679 NR2F2P24468 414 aa13.35□□□□□ -0.27
USP1-203ENST00000442679 RPL13P26373 211 aaKnown RBP13.35□□□□□ -0.27
USP1-203ENST00000442679 PPP1R2P41236 205 aa13.35□□□□□ -0.27
USP1-203ENST00000442679 CYP24A1Q07973 514 aa13.35□□□□□ -0.27
USP1-203ENST00000442679 ADAM9Q13443 819 aa13.35□□□□□ -0.27
USP1-203ENST00000442679 NFIL3Q16649 462 aa13.35□□□□□ -0.27
USP1-203ENST00000442679 USP41Q3LFD5 358 aa13.35□□□□□ -0.27
USP1-203ENST00000442679 ZCWPW2Q504Y3 356 aa13.35□□□□□ -0.27
USP1-203ENST00000442679 FAM171A1Q5VUB5 890 aa13.35□□□□□ -0.27
USP1-203ENST00000442679 CENPPQ6IPU0 288 aa13.35□□□□□ -0.27
USP1-203ENST00000442679 KIAA1841Q6NSI8 718 aa13.35□□□□□ -0.27
USP1-203ENST00000442679 RBM23Q86U06 439 aaKnown RBP13.35□□□□□ -0.27
USP1-203ENST00000442679 RNF168Q8IYW5 571 aaPredicted RBP13.35□□□□□ -0.27
USP1-203ENST00000442679 TRIML1Q8N9V2 468 aa13.35□□□□□ -0.27
USP1-203ENST00000442679 C3orf58Q8NDZ4 430 aa13.35□□□□□ -0.27
USP1-203ENST00000442679 PPP2R3CQ969Q6 453 aa13.35□□□□□ -0.27
USP1-203ENST00000442679 CCDC127Q96BQ5 260 aa13.35□□□□□ -0.27
USP1-203ENST00000442679 DHTKD1Q96HY7 919 aaPredicted RBP13.35□□□□□ -0.27
USP1-203ENST00000442679 MFSD14AQ96MC6 490 aa13.35□□□□□ -0.27
USP1-203ENST00000442679 TSG101Q99816 390 aa13.35□□□□□ -0.27
USP1-203ENST00000442679 TLE6Q9H808 572 aa13.35□□□□□ -0.27
USP1-203ENST00000442679 DPP3Q9NY33 737 aa13.35□□□□□ -0.27
USP1-203ENST00000442679 FRMD4BQ9Y2L6 1034 aa13.35□□□□□ -0.27
USP1-203ENST00000442679 NUB1Q9Y5A7 615 aa13.35□□□□□ -0.27
USP1-203ENST00000442679 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.34□□□□□ -0.27
USP1-203ENST00000442679 C2orf71A6NGG8 1288 aa13.34□□□□□ -0.27
USP1-203ENST00000442679 PPP1R3GB7ZBB8 358 aa13.34□□□□□ -0.27
USP1-203ENST00000442679 C2CD2LO14523 706 aa13.34□□□□□ -0.27
USP1-203ENST00000442679 PSMA7O14818 248 aa13.34□□□□□ -0.27
USP1-203ENST00000442679 URODP06132 367 aa13.34□□□□□ -0.27
USP1-203ENST00000442679 DLATP10515 647 aaKnown RBP13.34□□□□□ -0.27
USP1-203ENST00000442679 BRCC3P46736 316 aa13.34□□□□□ -0.27
USP1-203ENST00000442679 NRIP1P48552 1158 aa13.34□□□□□ -0.27
USP1-203ENST00000442679 GLUD2P49448 558 aa13.34□□□□□ -0.27
USP1-203ENST00000442679 CASP4P49662 377 aa13.34□□□□□ -0.27
USP1-203ENST00000442679 HYAL1Q12794 435 aa13.34□□□□□ -0.27
USP1-203ENST00000442679 ELAVL2Q12926 359 aaKnown RBP13.34□□□□□ -0.27
USP1-203ENST00000442679 PSMD6Q15008 389 aa13.34□□□□□ -0.27
USP1-203ENST00000442679 SKIV2LQ15477 1246 aaKnown RBP13.34□□□□□ -0.27
USP1-203ENST00000442679 PTPN14Q15678 1187 aa13.34□□□□□ -0.27
USP1-203ENST00000442679 DUOXA2Q1HG44 320 aa13.34□□□□□ -0.27
USP1-203ENST00000442679 EDRF1Q3B7T1 1238 aa13.34□□□□□ -0.27
USP1-203ENST00000442679 KIAA0319Q5VV43 1072 aa13.34□□□□□ -0.27
USP1-203ENST00000442679 C9orf57Q5W0N0 161 aa13.34□□□□□ -0.27
USP1-203ENST00000442679 CEP135Q66GS9 1140 aa13.34□□□□□ -0.27
USP1-203ENST00000442679 LMBRD2Q68DH5 695 aaPredicted RBP13.34□□□□□ -0.27
USP1-203ENST00000442679 ANKRD40Q6AI12 368 aa13.34□□□□□ -0.27
USP1-203ENST00000442679 KLHL10Q6JEL2 608 aa13.34□□□□□ -0.27
USP1-203ENST00000442679 ADGRD2Q7Z7M1 963 aa13.34□□□□□ -0.27
USP1-203ENST00000442679 CEP57Q86XR8 500 aa13.34□□□□□ -0.27
USP1-203ENST00000442679 B3GALT6Q96L58 329 aa13.34□□□□□ -0.27
USP1-203ENST00000442679 FNBP1Q96RU3 617 aa13.34□□□□□ -0.27
USP1-203ENST00000442679 IGFLR1Q9H665 355 aa13.34□□□□□ -0.27
USP1-203ENST00000442679 MRPL17Q9NRX2 175 aaKnown RBP13.34□□□□□ -0.27
USP1-203ENST00000442679 CHST7Q9NS84 486 aa13.34□□□□□ -0.27
USP1-203ENST00000442679 INTS13Q9NVM9 706 aa13.34□□□□□ -0.27
USP1-203ENST00000442679 SSX2IPQ9Y2D8 614 aa13.34□□□□□ -0.27
USP1-203ENST00000442679 TDRD15B5MCY1 1934 aaKnown RBP13.33□□□□□ -0.28
USP1-203ENST00000442679 ANO9A1A5B4 782 aa13.33□□□□□ -0.28
USP1-203ENST00000442679 I3L4J1 428 aa13.33□□□□□ -0.28
USP1-203ENST00000442679 PIRO00625 290 aa13.33□□□□□ -0.28
USP1-203ENST00000442679 PPEF2O14830 753 aa13.33□□□□□ -0.28
USP1-203ENST00000442679 PER2O15055 1255 aa13.33□□□□□ -0.28
USP1-203ENST00000442679 CETN3O15182 167 aa13.33□□□□□ -0.28
USP1-203ENST00000442679 LILRB3O75022 631 aa13.33□□□□□ -0.28
USP1-203ENST00000442679 TNNC2P02585 160 aa13.33□□□□□ -0.28
USP1-203ENST00000442679 TMEM191BP0C7N4 346 aa13.33□□□□□ -0.28
USP1-203ENST00000442679 TNNI1P19237 187 aa13.33□□□□□ -0.28
USP1-203ENST00000442679 CCNE1P24864 410 aa13.33□□□□□ -0.28
USP1-203ENST00000442679 DSG1Q02413 1049 aa13.33□□□□□ -0.28
USP1-203ENST00000442679 WDR49Q8IV35 697 aa13.33□□□□□ -0.28
USP1-203ENST00000442679 OR5B17Q8NGF7 314 aa13.33□□□□□ -0.28
USP1-203ENST00000442679 NELFBQ8WX92 580 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms