RNA–Protein interactions for RNA: ENST00000441580.5

CPSF4-206, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2 BASIC

Gene CPSF4, Length 942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-206ENST00000441580 AMHR2Q16671 573 aa14.11□□□□□ -0.15
CPSF4-206ENST00000441580 SGSM1Q2NKQ1 1148 aa14.11□□□□□ -0.15
CPSF4-206ENST00000441580 ZNF699Q32M78 642 aa14.11□□□□□ -0.15
CPSF4-206ENST00000441580 ACAD10Q6JQN1 1059 aa14.11□□□□□ -0.15
CPSF4-206ENST00000441580 C17orf99Q6UX52 265 aa14.11□□□□□ -0.15
CPSF4-206ENST00000441580 SAPCD2Q86UD0 394 aa14.11□□□□□ -0.15
CPSF4-206ENST00000441580 NT5DC4Q86YG4 428 aa14.11□□□□□ -0.15
CPSF4-206ENST00000441580 KRT222Q8N1A0 295 aa14.11□□□□□ -0.15
CPSF4-206ENST00000441580 UBR7Q8N806 425 aa14.11□□□□□ -0.15
CPSF4-206ENST00000441580 RBBP8NLQ8NC74 664 aaPredicted RBP14.11□□□□□ -0.15
CPSF4-206ENST00000441580 NLRP7Q8WX94 980 aa14.11□□□□□ -0.15
CPSF4-206ENST00000441580 USP6NLQ92738 828 aa14.11□□□□□ -0.15
CPSF4-206ENST00000441580 PCDHB18PQ96TA0 734 aa14.11□□□□□ -0.15
CPSF4-206ENST00000441580 NAP1L3Q99457 506 aaPredicted RBP14.11□□□□□ -0.15
CPSF4-206ENST00000441580 ARID3AQ99856 593 aa14.11□□□□□ -0.15
CPSF4-206ENST00000441580 KATNAL1Q9BW62 490 aa14.11□□□□□ -0.15
CPSF4-206ENST00000441580 CARD9Q9H257 536 aa14.11□□□□□ -0.15
CPSF4-206ENST00000441580 EPC1Q9H2F5 836 aa14.11□□□□□ -0.15
CPSF4-206ENST00000441580 ACBD3Q9H3P7 528 aa14.11□□□□□ -0.15
CPSF4-206ENST00000441580 PDZD7Q9H5P4 517 aa14.11□□□□□ -0.15
CPSF4-206ENST00000441580 FAM124BQ9H5Z6 455 aaPredicted RBP14.11□□□□□ -0.15
CPSF4-206ENST00000441580 APOBEC3GQ9HC16 384 aaKnown RBP14.11□□□□□ -0.15
CPSF4-206ENST00000441580 OSGEPQ9NPF4 335 aa14.11□□□□□ -0.15
CPSF4-206ENST00000441580 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.11□□□□□ -0.153e-7■■■■■ 76.5
CPSF4-206ENST00000441580 GNEQ9Y223 722 aaKnown RBP14.11□□□□□ -0.15
CPSF4-206ENST00000441580 NOC2LQ9Y3T9 749 aaKnown RBP14.11□□□□□ -0.15
CPSF4-206ENST00000441580 PCDHB4Q9Y5E5 795 aa14.11□□□□□ -0.15
CPSF4-206ENST00000441580 NRCAMQ92823 1304 aa14.11□□□□□ -0.15
CPSF4-206ENST00000441580 EVPLQ92817 2033 aa14.1□□□□□ -0.15
CPSF4-206ENST00000441580 MGAMO43451 1857 aa14.1□□□□□ -0.15
CPSF4-206ENST00000441580 A0A087WZ62 844 aa14.1□□□□□ -0.15
CPSF4-206ENST00000441580 GJB1P08034 283 aa14.1□□□□□ -0.15
CPSF4-206ENST00000441580 GNA15P30679 374 aa14.1□□□□□ -0.15
CPSF4-206ENST00000441580 NSFP46459 744 aaKnown RBP14.1□□□□□ -0.15
CPSF4-206ENST00000441580 DNA2P51530 1060 aa14.1□□□□□ -0.15
CPSF4-206ENST00000441580 ZNF132P52740 706 aa14.1□□□□□ -0.15
CPSF4-206ENST00000441580 TFAMQ00059 246 aaKnown RBP14.1□□□□□ -0.15
CPSF4-206ENST00000441580 LONRF2Q1L5Z9 754 aa14.1□□□□□ -0.15
CPSF4-206ENST00000441580 EEF1DP3Q658K8 133 aa14.1□□□□□ -0.15
CPSF4-206ENST00000441580 THNSL1Q8IYQ7 743 aa14.1□□□□□ -0.15
CPSF4-206ENST00000441580 RASGEF1CQ8N431 466 aa14.1□□□□□ -0.15
CPSF4-206ENST00000441580 UBL4BQ8N7F7 174 aa14.1□□□□□ -0.15
CPSF4-206ENST00000441580 USP38Q8NB14 1042 aa14.1□□□□□ -0.15
CPSF4-206ENST00000441580 ZNF564Q8TBZ8 553 aaPredicted RBP14.1□□□□□ -0.15
CPSF4-206ENST00000441580 CCDC102AQ96A19 550 aa14.1□□□□□ -0.15
CPSF4-206ENST00000441580 RPS6KC1Q96S38 1066 aa14.1□□□□□ -0.15
CPSF4-206ENST00000441580 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.1□□□□□ -0.151e-6■■■□□ 19
CPSF4-206ENST00000441580 FDXACB1Q9BRP7 624 aaPredicted RBP14.1□□□□□ -0.15
CPSF4-206ENST00000441580 ASB7Q9H672 318 aa14.1□□□□□ -0.15
CPSF4-206ENST00000441580 MINDY3Q9H8M7 445 aa14.1□□□□□ -0.15
CPSF4-206ENST00000441580 RNF216Q9NWF9 866 aaPredicted RBP14.1□□□□□ -0.15
CPSF4-206ENST00000441580 LCMT1Q9UIC8 334 aa14.1□□□□□ -0.15
CPSF4-206ENST00000441580 TTC7AQ9ULT0 858 aaPredicted RBP14.1□□□□□ -0.15
CPSF4-206ENST00000441580 PACSIN2Q9UNF0 486 aaPredicted RBP14.1□□□□□ -0.15
CPSF4-206ENST00000441580 PASKQ96RG2 1323 aa14.1□□□□□ -0.15
CPSF4-206ENST00000441580 SMIM35A0A1B0GVV1 85 aa14.09□□□□□ -0.15
CPSF4-206ENST00000441580 TNPO2O14787 897 aaKnown RBP14.09□□□□□ -0.15
CPSF4-206ENST00000441580 TSPAN1O60635 241 aa14.09□□□□□ -0.15
CPSF4-206ENST00000441580 LSM8O95777 96 aaKnown RBP14.09□□□□□ -0.15
CPSF4-206ENST00000441580 CYP1A1P04798 512 aaPredicted RBP14.09□□□□□ -0.15
CPSF4-206ENST00000441580 ZNF865P0CJ78 1059 aaPredicted RBP14.09□□□□□ -0.15
CPSF4-206ENST00000441580 SMIM10L2AP0DMW4 78 aa14.09□□□□□ -0.15
CPSF4-206ENST00000441580 SMIM10L2BP0DMW5 78 aa14.09□□□□□ -0.15
CPSF4-206ENST00000441580 CXCL8P10145 99 aa14.09□□□□□ -0.15
CPSF4-206ENST00000441580 HSPA6P17066 643 aa14.09□□□□□ -0.15
CPSF4-206ENST00000441580 MFSD10Q14728 455 aa14.09□□□□□ -0.15
CPSF4-206ENST00000441580 PPP2R5EQ16537 467 aa14.09□□□□□ -0.15
CPSF4-206ENST00000441580 SEZ6Q53EL9 994 aa14.09□□□□□ -0.15
CPSF4-206ENST00000441580 LIN9Q5TKA1 542 aa14.09□□□□□ -0.15
CPSF4-206ENST00000441580 SPOPLQ6IQ16 392 aa14.09□□□□□ -0.15
CPSF4-206ENST00000441580 TMEM270Q6UE05 265 aa14.09□□□□□ -0.15
CPSF4-206ENST00000441580 HDXQ7Z353 690 aa14.09□□□□□ -0.15
CPSF4-206ENST00000441580 DNAAF5Q86Y56 855 aa14.09□□□□□ -0.15
CPSF4-206ENST00000441580 CD302Q8IX05 232 aa14.09□□□□□ -0.15
CPSF4-206ENST00000441580 EFCAB13Q8IY85 973 aa14.09□□□□□ -0.15
CPSF4-206ENST00000441580 FAM212AQ96EL1 285 aa14.09□□□□□ -0.15
CPSF4-206ENST00000441580 NUP85Q9BW27 656 aa14.09□□□□□ -0.15
CPSF4-206ENST00000441580 GCOM2Q9BZD3 368 aaPredicted RBP14.09□□□□□ -0.15
CPSF4-206ENST00000441580 AP5M1Q9H0R1 490 aa14.09□□□□□ -0.15
CPSF4-206ENST00000441580 RBM12Q9NTZ6 932 aaKnown RBP14.09□□□□□ -0.15
CPSF4-206ENST00000441580 STIM2Q9P246 746 aa14.09□□□□□ -0.15
CPSF4-206ENST00000441580 NUB1Q9Y5A7 615 aa14.09□□□□□ -0.15
CPSF4-206ENST00000441580 TLL2Q9Y6L7 1015 aa14.09□□□□□ -0.15
CPSF4-206ENST00000441580 CASP8AP2Q9UKL3 1982 aa14.09□□□□□ -0.15
CPSF4-206ENST00000441580 KAT6AQ92794 2004 aa14.08□□□□□ -0.15
CPSF4-206ENST00000441580 GOLGA6L10A0A0M3HER8 536 aa14.08□□□□□ -0.16
CPSF4-206ENST00000441580 MBLAC1A4D2B0 266 aaPredicted RBP14.08□□□□□ -0.16
CPSF4-206ENST00000441580 ADCY6O43306 1168 aa14.08□□□□□ -0.16
CPSF4-206ENST00000441580 CEP104O60308 925 aa14.08□□□□□ -0.16
CPSF4-206ENST00000441580 SEC31AO94979 1220 aaKnown RBP14.08□□□□□ -0.16
CPSF4-206ENST00000441580 TBC1D8O95759 1140 aa14.08□□□□□ -0.16
CPSF4-206ENST00000441580 VTNP04004 478 aa14.08□□□□□ -0.16
CPSF4-206ENST00000441580 STAG3L1P0CL83 205 aa14.08□□□□□ -0.16
CPSF4-206ENST00000441580 UNGP13051 313 aaPredicted RBP14.08□□□□□ -0.16
CPSF4-206ENST00000441580 P4HA1P13674 534 aa14.08□□□□□ -0.16
CPSF4-206ENST00000441580 CTNNA2P26232 953 aa14.08□□□□□ -0.16
CPSF4-206ENST00000441580 ATICP31939 592 aa14.08□□□□□ -0.16
CPSF4-206ENST00000441580 GPS2Q13227 327 aa14.08□□□□□ -0.16
CPSF4-206ENST00000441580 BEND6Q5SZJ8 279 aaPredicted RBP14.08□□□□□ -0.16
CPSF4-206ENST00000441580 MARCH8Q5T0T0 291 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms