RNA–Protein interactions for RNA: ENST00000441310.6

PMS1-213, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PMS1, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-213ENST00000441310 CETPP11597 493 aa17.85■□□□□ 0.45
PMS1-213ENST00000441310 DESP17661 470 aa17.85■□□□□ 0.45
PMS1-213ENST00000441310 CHKAP35790 457 aa17.85■□□□□ 0.45
PMS1-213ENST00000441310 WDR4P57081 412 aaKnown RBP17.85■□□□□ 0.45
PMS1-213ENST00000441310 ARHGAP18Q8N392 663 aa17.85■□□□□ 0.45
PMS1-213ENST00000441310 DCAF4Q8WV16 495 aa17.85■□□□□ 0.45
PMS1-213ENST00000441310 KRT35Q92764 455 aa17.85■□□□□ 0.45
PMS1-213ENST00000441310 STMN2Q93045 179 aa17.85■□□□□ 0.45
PMS1-213ENST00000441310 ART4Q93070 314 aa17.85■□□□□ 0.45
PMS1-213ENST00000441310 WASF2Q9Y6W5 498 aa17.85■□□□□ 0.45
PMS1-213ENST00000441310 TCRBV7S2A1N4TA0A589 114 aa17.84■□□□□ 0.45
PMS1-213ENST00000441310 PON1P27169 355 aa17.84■□□□□ 0.45
PMS1-213ENST00000441310 NPEPPSP55786 919 aa17.84■□□□□ 0.45
PMS1-213ENST00000441310 SYDE2Q5VT97 1194 aa17.84■□□□□ 0.45
PMS1-213ENST00000441310 RFFLQ8WZ73 363 aa17.84■□□□□ 0.45
PMS1-213ENST00000441310 MRIQ9BWK5 157 aa17.84■□□□□ 0.45
PMS1-213ENST00000441310 AMNQ9BXJ7 453 aa17.84■□□□□ 0.45
PMS1-213ENST00000441310 CHMP2BQ9UQN3 213 aa17.84■□□□□ 0.45
PMS1-213ENST00000441310 PCDHA3Q9Y5H8 950 aa17.84■□□□□ 0.45
PMS1-213ENST00000441310 PSMG1O95456 288 aa17.84■□□□□ 0.45
PMS1-213ENST00000441310 WDR72Q3MJ13 1102 aa17.84■□□□□ 0.45
PMS1-213ENST00000441310 TRMT10CQ7L0Y3 403 aaKnown RBP17.84■□□□□ 0.45
PMS1-213ENST00000441310 EPM2AIP1Q7L775 607 aaPredicted RBP17.84■□□□□ 0.45
PMS1-213ENST00000441310 PRUNE1Q86TP1 453 aa17.84■□□□□ 0.45
PMS1-213ENST00000441310 SH3TC2Q8TF17 1288 aa17.84■□□□□ 0.45
PMS1-213ENST00000441310 ZNF184Q99676 751 aaPredicted RBP17.84■□□□□ 0.45
PMS1-213ENST00000441310 SPDYE2BA6NHP3 402 aa17.83■□□□□ 0.45
PMS1-213ENST00000441310 PENKP01210 267 aaPredicted RBP17.83■□□□□ 0.45
PMS1-213ENST00000441310 SPDYE6P0CI01 402 aa17.83■□□□□ 0.45
PMS1-213ENST00000441310 LIN52Q52LA3 116 aa17.83■□□□□ 0.45
PMS1-213ENST00000441310 ZNF70Q9UC06 446 aaPredicted RBP17.83■□□□□ 0.45
PMS1-213ENST00000441310 ATF5Q9Y2D1 282 aaPredicted RBP17.83■□□□□ 0.45
PMS1-213ENST00000441310 DIS3Q9Y2L1 958 aaKnown RBP17.83■□□□□ 0.45
PMS1-213ENST00000441310 STARD13Q9Y3M8 1113 aa17.83■□□□□ 0.45
PMS1-213ENST00000441310 ARHGAP4P98171 946 aa17.83■□□□□ 0.44
PMS1-213ENST00000441310 PPATQ06203 517 aa17.83■□□□□ 0.44
PMS1-213ENST00000441310 RSBN1LQ6PCB5 846 aaPredicted RBP17.83■□□□□ 0.44
PMS1-213ENST00000441310 PPP1R21Q6ZMI0 780 aa17.83■□□□□ 0.44
PMS1-213ENST00000441310 MTDHQ86UE4 582 aaKnown RBP17.83■□□□□ 0.44
PMS1-213ENST00000441310 PWWP2AQ96N64 755 aa17.83■□□□□ 0.44
PMS1-213ENST00000441310 GLIS2Q9BZE0 524 aaPredicted RBP17.83■□□□□ 0.44
PMS1-213ENST00000441310 PHACTR1Q9C0D0 580 aa17.83■□□□□ 0.44
PMS1-213ENST00000441310 KRT82Q9NSB4 513 aa17.83■□□□□ 0.44
PMS1-213ENST00000441310 POTEFA5A3E0 1075 aa17.83■□□□□ 0.44
PMS1-213ENST00000441310 A6NJR5 290 aa17.83■□□□□ 0.44
PMS1-213ENST00000441310 CFBP00751 764 aa17.83■□□□□ 0.44
PMS1-213ENST00000441310 POTEIP0CG38 1075 aa17.83■□□□□ 0.44
PMS1-213ENST00000441310 NR2F2P24468 414 aa17.83■□□□□ 0.44
PMS1-213ENST00000441310 PRKCIP41743 596 aa17.83■□□□□ 0.44
PMS1-213ENST00000441310 CYP4A11Q02928 519 aa17.83■□□□□ 0.44
PMS1-213ENST00000441310 LSAMPQ13449 338 aa17.83■□□□□ 0.44
PMS1-213ENST00000441310 DPY19L2Q6NUT2 758 aa17.83■□□□□ 0.44
PMS1-213ENST00000441310 PPP1R18Q6NYC8 613 aa17.83■□□□□ 0.44
PMS1-213ENST00000441310 POTEGQ6S5H5 508 aa17.83■□□□□ 0.44
PMS1-213ENST00000441310 POTEEQ6S8J3 1075 aa17.83■□□□□ 0.44
PMS1-213ENST00000441310 CCDC125Q86Z20 511 aa17.83■□□□□ 0.44
PMS1-213ENST00000441310 SCYL3Q8IZE3 742 aa17.83■□□□□ 0.44
PMS1-213ENST00000441310 AAASQ9NRG9 546 aa17.83■□□□□ 0.44
PMS1-213ENST00000441310 NENFQ9UMX5 172 aa17.83■□□□□ 0.44
PMS1-213ENST00000441310 NAALADL1Q9UQQ1 740 aa17.83■□□□□ 0.44
PMS1-213ENST00000441310 PASKQ96RG2 1323 aa17.82■□□□□ 0.44
PMS1-213ENST00000441310 THAP12O43422 761 aa17.82■□□□□ 0.44
PMS1-213ENST00000441310 AP1B1Q10567 949 aa17.82■□□□□ 0.44
PMS1-213ENST00000441310 MOGSQ13724 837 aa17.82■□□□□ 0.44
PMS1-213ENST00000441310 TMED2Q15363 201 aa17.82■□□□□ 0.44
PMS1-213ENST00000441310 OLFML2BQ68BL8 750 aa17.82■□□□□ 0.44
PMS1-213ENST00000441310 WDR60Q8WVS4 1066 aa17.82■□□□□ 0.44
PMS1-213ENST00000441310 CENPKQ9BS16 269 aa17.82■□□□□ 0.44
PMS1-213ENST00000441310 UBN1Q9NPG3 1134 aa17.82■□□□□ 0.44
PMS1-213ENST00000441310 FBXO28Q9NVF7 368 aa17.82■□□□□ 0.44
PMS1-213ENST00000441310 CHORDC1Q9UHD1 332 aaPredicted RBP17.82■□□□□ 0.44
PMS1-213ENST00000441310 PRR12Q9ULL5 1215 aa17.82■□□□□ 0.44
PMS1-213ENST00000441310 ZNF510Q9Y2H8 683 aa17.82■□□□□ 0.44
PMS1-213ENST00000441310 RASA4BC9J798 803 aa17.82■□□□□ 0.44
PMS1-213ENST00000441310 RASA4O43374 803 aa17.82■□□□□ 0.44
PMS1-213ENST00000441310 DPY19L2P1Q6NXN4 242 aa17.82■□□□□ 0.44
PMS1-213ENST00000441310 THAP2Q9H0W7 228 aa17.82■□□□□ 0.44
PMS1-213ENST00000441310 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.82■□□□□ 0.44
PMS1-213ENST00000441310 PCYOX1Q9UHG3 505 aa17.82■□□□□ 0.44
PMS1-213ENST00000441310 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.81■□□□□ 0.44
PMS1-213ENST00000441310 EXOC3O60645 756 aa17.81■□□□□ 0.44
PMS1-213ENST00000441310 ENTPD3O75355 529 aa17.81■□□□□ 0.44
PMS1-213ENST00000441310 ZBTB7AO95365 584 aa17.81■□□□□ 0.44
PMS1-213ENST00000441310 TRIP13Q15645 432 aaPredicted RBP17.81■□□□□ 0.44
PMS1-213ENST00000441310 HERC4Q5GLZ8 1057 aaPredicted RBP17.81■□□□□ 0.44
PMS1-213ENST00000441310 MCUR1Q96AQ8 359 aa17.81■□□□□ 0.44
PMS1-213ENST00000441310 ALG6Q9Y672 507 aa17.81■□□□□ 0.44
PMS1-213ENST00000441310 SLC4A7Q9Y6M7 1214 aa17.81■□□□□ 0.44
PMS1-213ENST00000441310 FAM86B1E9PN63 330 aa17.81■□□□□ 0.44
PMS1-213ENST00000441310 FAM86B2P0C5J1 330 aa17.81■□□□□ 0.44
PMS1-213ENST00000441310 ZNF76P36508 570 aa17.81■□□□□ 0.44
PMS1-213ENST00000441310 FKBP1AP62942 108 aaKnown RBP17.81■□□□□ 0.44
PMS1-213ENST00000441310 NLRP9Q7RTR0 991 aa17.81■□□□□ 0.44
PMS1-213ENST00000441310 NCSTNQ92542 709 aa17.81■□□□□ 0.44
PMS1-213ENST00000441310 ABTB1Q969K4 478 aaPredicted RBP17.81■□□□□ 0.44
PMS1-213ENST00000441310 DNAJC19Q96DA6 116 aa17.81■□□□□ 0.44
PMS1-213ENST00000441310 DDX27Q96GQ7 796 aaKnown RBP17.81■□□□□ 0.44
PMS1-213ENST00000441310 ASCC2Q9H1I8 757 aaPredicted RBP17.81■□□□□ 0.44
PMS1-213ENST00000441310 LARSQ9P2J5 1176 aaKnown RBP17.81■□□□□ 0.44
PMS1-213ENST00000441310 ASIC3Q9UHC3 531 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms