RNA–Protein interactions for RNA: ENST00000440978.1

EBF3-203, Transcript of early B cell factor 3, humanhuman

TSL 3

Gene EBF3, Length 817 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3-203ENST00000440978 PODXLO00592 558 aa12.92□□□□□ -0.34
EBF3-203ENST00000440978 SLC16A3O15427 465 aaKnown RBP12.92□□□□□ -0.34
EBF3-203ENST00000440978 LETM1O95202 739 aaPredicted RBP12.92□□□□□ -0.34
EBF3-203ENST00000440978 NFICP08651 508 aa12.92□□□□□ -0.34
EBF3-203ENST00000440978 CLCNKBP51801 687 aa12.92□□□□□ -0.34
EBF3-203ENST00000440978 AP3M2P53677 418 aa12.92□□□□□ -0.34
EBF3-203ENST00000440978 SOX4Q06945 474 aaPredicted RBP12.92□□□□□ -0.34
EBF3-203ENST00000440978 SPAG1Q07617 926 aa12.92□□□□□ -0.34
EBF3-203ENST00000440978 CEP135Q66GS9 1140 aa12.92□□□□□ -0.34
EBF3-203ENST00000440978 KLHL10Q6JEL2 608 aa12.92□□□□□ -0.34
EBF3-203ENST00000440978 PDE12Q6L8Q7 609 aaKnown RBP12.92□□□□□ -0.34
EBF3-203ENST00000440978 TTI2Q6NXR4 508 aa12.92□□□□□ -0.34
EBF3-203ENST00000440978 CAVIN1Q6NZI2 390 aaKnown RBP12.92□□□□□ -0.34
EBF3-203ENST00000440978 INTS8Q75QN2 995 aaKnown RBP12.92□□□□□ -0.34
EBF3-203ENST00000440978 Q7L0L9 218 aa12.92□□□□□ -0.34
EBF3-203ENST00000440978 DDX53Q86TM3 631 aaKnown RBP12.92□□□□□ -0.34
EBF3-203ENST00000440978 EFCAB13Q8IY85 973 aa12.92□□□□□ -0.34
EBF3-203ENST00000440978 SPPL3Q8TCT6 385 aa12.92□□□□□ -0.34
EBF3-203ENST00000440978 POF1BQ8WVV4 589 aa12.92□□□□□ -0.34
EBF3-203ENST00000440978 C18orf25Q96B23 403 aaPredicted RBP12.92□□□□□ -0.34
EBF3-203ENST00000440978 CEP63Q96MT8 703 aa12.92□□□□□ -0.34
EBF3-203ENST00000440978 CGRRF1Q99675 332 aa12.92□□□□□ -0.34
EBF3-203ENST00000440978 PAAF1Q9BRP4 392 aa12.92□□□□□ -0.34
EBF3-203ENST00000440978 ALG13Q9NP73 1137 aaKnown RBP12.92□□□□□ -0.34
EBF3-203ENST00000440978 MARCH5Q9NX47 278 aa12.92□□□□□ -0.34
EBF3-203ENST00000440978 MTMR10Q9NXD2 777 aa12.92□□□□□ -0.34
EBF3-203ENST00000440978 TUBGCP4Q9UGJ1 667 aa12.92□□□□□ -0.34
EBF3-203ENST00000440978 ADAM28Q9UKQ2 775 aa12.92□□□□□ -0.34
EBF3-203ENST00000440978 CTNND2Q9UQB3 1225 aa12.92□□□□□ -0.34
EBF3-203ENST00000440978 PRG3Q9Y2Y8 225 aaPredicted RBP12.92□□□□□ -0.34
EBF3-203ENST00000440978 SF3B1O75533 1304 aaKnown RBP eCLIP12.91□□□□□ -0.34
EBF3-203ENST00000440978 TRIM49BA6NDI0 452 aa12.91□□□□□ -0.34
EBF3-203ENST00000440978 GRM6O15303 877 aa12.91□□□□□ -0.34
EBF3-203ENST00000440978 TRAPPC3O43617 180 aa12.91□□□□□ -0.34
EBF3-203ENST00000440978 LPXNO60711 386 aa12.91□□□□□ -0.34
EBF3-203ENST00000440978 TADA2AO75478 443 aa12.91□□□□□ -0.34
EBF3-203ENST00000440978 AKAP3O75969 853 aa12.91□□□□□ -0.34
EBF3-203ENST00000440978 B3GAT3O94766 335 aa12.91□□□□□ -0.34
EBF3-203ENST00000440978 KIF4AO95239 1232 aa12.91□□□□□ -0.34
EBF3-203ENST00000440978 EFEMP2O95967 443 aa12.91□□□□□ -0.34
EBF3-203ENST00000440978 TNNC2P02585 160 aa12.91□□□□□ -0.34
EBF3-203ENST00000440978 TMEM191BP0C7N4 346 aa12.91□□□□□ -0.34
EBF3-203ENST00000440978 ERCC5P28715 1186 aaPredicted RBP12.91□□□□□ -0.34
EBF3-203ENST00000440978 CASP4P49662 377 aa12.91□□□□□ -0.34
EBF3-203ENST00000440978 PMS1P54277 932 aaKnown RBP12.91□□□□□ -0.34
EBF3-203ENST00000440978 MCCD1P59942 119 aaPredicted RBP12.91□□□□□ -0.34
EBF3-203ENST00000440978 CLDN10P78369 228 aa12.91□□□□□ -0.34
EBF3-203ENST00000440978 TFAMQ00059 246 aaKnown RBP12.91□□□□□ -0.34
EBF3-203ENST00000440978 ELAVL2Q12926 359 aaKnown RBP12.91□□□□□ -0.34
EBF3-203ENST00000440978 BMS1Q14692 1282 aaKnown RBP12.91□□□□□ -0.34
EBF3-203ENST00000440978 DUOXA2Q1HG44 320 aa12.91□□□□□ -0.34
EBF3-203ENST00000440978 DPCR1Q3MIW9 517 aa12.91□□□□□ -0.34
EBF3-203ENST00000440978 TMEM173Q86WV6 379 aaPredicted RBP12.91□□□□□ -0.34
EBF3-203ENST00000440978 FAM186BQ8IYM0 893 aa12.91□□□□□ -0.34
EBF3-203ENST00000440978 TMC2Q8TDI7 906 aa12.91□□□□□ -0.34
EBF3-203ENST00000440978 PARD3BQ8TEW8 1205 aa12.91□□□□□ -0.34
EBF3-203ENST00000440978 BCL7CQ8WUZ0 217 aaPredicted RBP12.91□□□□□ -0.34
EBF3-203ENST00000440978 MRPL38Q96DV4 380 aaKnown RBP12.91□□□□□ -0.34
EBF3-203ENST00000440978 ANKRD36BP1Q96IX9 119 aa12.91□□□□□ -0.34
EBF3-203ENST00000440978 GUCD1Q96NT3 240 aa12.91□□□□□ -0.34
EBF3-203ENST00000440978 CDX2Q99626 313 aaPredicted RBP12.91□□□□□ -0.34
EBF3-203ENST00000440978 GOLGA2P5Q9HBQ8 144 aa12.91□□□□□ -0.34
EBF3-203ENST00000440978 TLR9Q9NR96 1032 aa12.91□□□□□ -0.34
EBF3-203ENST00000440978 INTS13Q9NVM9 706 aa12.91□□□□□ -0.34
EBF3-203ENST00000440978 ANO10Q9NW15 660 aa12.91□□□□□ -0.34
EBF3-203ENST00000440978 DPP3Q9NY33 737 aa12.91□□□□□ -0.34
EBF3-203ENST00000440978 ITGA11Q9UKX5 1188 aa12.91□□□□□ -0.34
EBF3-203ENST00000440978 PLXNA4Q9HCM2 1894 aa12.91□□□□□ -0.34
EBF3-203ENST00000440978 ANO9A1A5B4 782 aa12.9□□□□□ -0.34
EBF3-203ENST00000440978 RFXAPO00287 272 aa12.9□□□□□ -0.34
EBF3-203ENST00000440978 IKBKBO14920 756 aa12.9□□□□□ -0.34
EBF3-203ENST00000440978 FGFR1OPO95684 399 aaKnown RBP12.9□□□□□ -0.34
EBF3-203ENST00000440978 SOD2P04179 222 aa12.9□□□□□ -0.34
EBF3-203ENST00000440978 DLATP10515 647 aaKnown RBP12.9□□□□□ -0.34
EBF3-203ENST00000440978 EPB41P11171 864 aaKnown RBP12.9□□□□□ -0.34
EBF3-203ENST00000440978 KRT13P13646 458 aa12.9□□□□□ -0.34
EBF3-203ENST00000440978 TNNI1P19237 187 aa12.9□□□□□ -0.34
EBF3-203ENST00000440978 WNT7BP56706 349 aa12.9□□□□□ -0.34
EBF3-203ENST00000440978 STX1AQ16623 288 aa12.9□□□□□ -0.34
EBF3-203ENST00000440978 C9orf57Q5W0N0 161 aa12.9□□□□□ -0.34
EBF3-203ENST00000440978 FUT10Q6P4F1 479 aa12.9□□□□□ -0.34
EBF3-203ENST00000440978 FILIP1Q7Z7B0 1213 aa12.9□□□□□ -0.34
EBF3-203ENST00000440978 RNF168Q8IYW5 571 aaPredicted RBP12.9□□□□□ -0.34
EBF3-203ENST00000440978 CSGALNACT2Q8N6G5 542 aa12.9□□□□□ -0.34
EBF3-203ENST00000440978 CCDC127Q96BQ5 260 aa12.9□□□□□ -0.34
EBF3-203ENST00000440978 DUSP9Q99956 384 aaKnown RBP12.9□□□□□ -0.34
EBF3-203ENST00000440978 METTL14Q9HCE5 456 aaKnown RBP12.9□□□□□ -0.34
EBF3-203ENST00000440978 NGRNQ9NPE2 291 aaKnown RBP12.9□□□□□ -0.34
EBF3-203ENST00000440978 SSX2IPQ9Y2D8 614 aa12.9□□□□□ -0.34
EBF3-203ENST00000440978 NUB1Q9Y5A7 615 aa12.9□□□□□ -0.34
EBF3-203ENST00000440978 LRRIQ3A6PVS8 624 aaPredicted RBP12.89□□□□□ -0.35
EBF3-203ENST00000440978 PIRO00625 290 aa12.89□□□□□ -0.35
EBF3-203ENST00000440978 STX10O60499 249 aa12.89□□□□□ -0.35
EBF3-203ENST00000440978 GNA14O95837 355 aa12.89□□□□□ -0.35
EBF3-203ENST00000440978 DNAJB1P25685 340 aa12.89□□□□□ -0.35
EBF3-203ENST00000440978 PNPLA4P41247 253 aa12.89□□□□□ -0.35
EBF3-203ENST00000440978 VAMP7P51809 220 aa12.89□□□□□ -0.35
EBF3-203ENST00000440978 STX17P56962 302 aa12.89□□□□□ -0.35
EBF3-203ENST00000440978 BFSP1Q12934 665 aa12.89□□□□□ -0.35
EBF3-203ENST00000440978 CAMK1Q14012 370 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms