RNA–Protein interactions for RNA: ENST00000440447.2

PTX4-202, Transcript of pentraxin 4, humanhuman

TSL 5 BASIC

Gene PTX4, Length 1,117 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTX4-202ENST00000440447 VPS52Q8N1B4 723 aa19.79■□□□□ 0.76
PTX4-202ENST00000440447 MFSD14AQ96MC6 490 aa19.79■□□□□ 0.76
PTX4-202ENST00000440447 FNBP1Q96RU3 617 aa19.79■□□□□ 0.76
PTX4-202ENST00000440447 ENTPD7Q9NQZ7 604 aa19.79■□□□□ 0.76
PTX4-202ENST00000440447 TDRD15B5MCY1 1934 aaKnown RBP19.78■□□□□ 0.76
PTX4-202ENST00000440447 CETN3O15182 167 aa19.78■□□□□ 0.76
PTX4-202ENST00000440447 CASP4P49662 377 aa19.78■□□□□ 0.76
PTX4-202ENST00000440447 GUCY2FP51841 1108 aa19.78■□□□□ 0.76
PTX4-202ENST00000440447 ERVFC1P60507 584 aa19.78■□□□□ 0.76
PTX4-202ENST00000440447 PDE12Q6L8Q7 609 aaKnown RBP19.78■□□□□ 0.76
PTX4-202ENST00000440447 FUT10Q6P4F1 479 aa19.78■□□□□ 0.76
PTX4-202ENST00000440447 HASPINQ8TF76 798 aa19.78■□□□□ 0.76
PTX4-202ENST00000440447 NELFBQ8WX92 580 aa19.78■□□□□ 0.76
PTX4-202ENST00000440447 CCDC127Q96BQ5 260 aa19.78■□□□□ 0.76
PTX4-202ENST00000440447 TCF25Q9BQ70 676 aa19.78■□□□□ 0.76
PTX4-202ENST00000440447 NGRNQ9NPE2 291 aaKnown RBP19.78■□□□□ 0.76
PTX4-202ENST00000440447 DPP3Q9NY33 737 aa19.78■□□□□ 0.76
PTX4-202ENST00000440447 CHD7Q9P2D1 2997 aa19.78■□□□□ 0.76
PTX4-202ENST00000440447 CITO14578 2027 aa19.78■□□□□ 0.76
PTX4-202ENST00000440447 SF3B1O75533 1304 aaKnown RBP eCLIP19.77■□□□□ 0.76
PTX4-202ENST00000440447 BICDL2A1A5D9 508 aa19.77■□□□□ 0.76
PTX4-202ENST00000440447 MAPK13O15264 365 aa19.77■□□□□ 0.76
PTX4-202ENST00000440447 TRAPPC3O43617 180 aa19.77■□□□□ 0.76
PTX4-202ENST00000440447 SOD2P04179 222 aa19.77■□□□□ 0.76
PTX4-202ENST00000440447 TMEM191BP0C7N4 346 aa19.77■□□□□ 0.76
PTX4-202ENST00000440447 DLATP10515 647 aaKnown RBP19.77■□□□□ 0.76
PTX4-202ENST00000440447 PSMC2P35998 433 aaKnown RBP19.77■□□□□ 0.76
PTX4-202ENST00000440447 PMS1P54277 932 aaKnown RBP19.77■□□□□ 0.76
PTX4-202ENST00000440447 FKBP3Q00688 224 aaKnown RBP19.77■□□□□ 0.76
PTX4-202ENST00000440447 ELAVL2Q12926 359 aaKnown RBP19.77■□□□□ 0.76
PTX4-202ENST00000440447 PAK1Q13153 545 aa19.77■□□□□ 0.76
PTX4-202ENST00000440447 TIGD5Q53EQ6 642 aa19.77■□□□□ 0.76
PTX4-202ENST00000440447 PLPP4Q5VZY2 271 aa19.77■□□□□ 0.76
PTX4-202ENST00000440447 MICALL1Q8N3F8 863 aa19.77■□□□□ 0.76
PTX4-202ENST00000440447 MLKLQ8NB16 471 aa19.77■□□□□ 0.76
PTX4-202ENST00000440447 SYAP1Q96A49 352 aaPredicted RBP19.77■□□□□ 0.76
PTX4-202ENST00000440447 ANKRD36BP1Q96IX9 119 aa19.77■□□□□ 0.76
PTX4-202ENST00000440447 HERC2P3Q9BVR0 1158 aa19.77■□□□□ 0.76
PTX4-202ENST00000440447 VN1R3Q9BXE9 311 aa19.77■□□□□ 0.76
PTX4-202ENST00000440447 ZBP1Q9H171 429 aa19.77■□□□□ 0.76
PTX4-202ENST00000440447 CTNND2Q9UQB3 1225 aa19.77■□□□□ 0.76
PTX4-202ENST00000440447 STXBP5LQ9Y2K9 1186 aa19.77■□□□□ 0.76
PTX4-202ENST00000440447 NUB1Q9Y5A7 615 aa19.77■□□□□ 0.76
PTX4-202ENST00000440447 CDH23Q9H251 3354 aa19.77■□□□□ 0.76
PTX4-202ENST00000440447 COL4A4P53420 1690 aaPredicted RBP19.77■□□□□ 0.76
PTX4-202ENST00000440447 TRIM49BA6NDI0 452 aa19.76■□□□□ 0.75
PTX4-202ENST00000440447 FSCN2O14926 492 aa19.76■□□□□ 0.75
PTX4-202ENST00000440447 TNNC2P02585 160 aa19.76■□□□□ 0.75
PTX4-202ENST00000440447 TNNI1P19237 187 aa19.76■□□□□ 0.75
PTX4-202ENST00000440447 CA8P35219 290 aa19.76■□□□□ 0.75
PTX4-202ENST00000440447 IRS1P35568 1242 aa19.76■□□□□ 0.75
PTX4-202ENST00000440447 NLRP12P59046 1061 aa19.76■□□□□ 0.75
PTX4-202ENST00000440447 SMC1AQ14683 1233 aaKnown RBP19.76■□□□□ 0.75
PTX4-202ENST00000440447 DUOXA2Q1HG44 320 aa19.76■□□□□ 0.75
PTX4-202ENST00000440447 LMBRD2Q68DH5 695 aaPredicted RBP19.76■□□□□ 0.75
PTX4-202ENST00000440447 RBM43Q6ZSC3 357 aaKnown RBP19.76■□□□□ 0.75
PTX4-202ENST00000440447 WDR49Q8IV35 697 aa19.76■□□□□ 0.75
PTX4-202ENST00000440447 FAM186BQ8IYM0 893 aa19.76■□□□□ 0.75
PTX4-202ENST00000440447 TMEM130Q8N3G9 435 aa19.76■□□□□ 0.75
PTX4-202ENST00000440447 C3orf58Q8NDZ4 430 aa19.76■□□□□ 0.75
PTX4-202ENST00000440447 PPP2R3CQ969Q6 453 aa19.76■□□□□ 0.75
PTX4-202ENST00000440447 CGRRF1Q99675 332 aa19.76■□□□□ 0.75
PTX4-202ENST00000440447 GPR62Q9BZJ7 368 aa19.76■□□□□ 0.75
PTX4-202ENST00000440447 NSUN3Q9H649 340 aaKnown RBP19.76■□□□□ 0.75
PTX4-202ENST00000440447 INTS13Q9NVM9 706 aa19.76■□□□□ 0.75
PTX4-202ENST00000440447 AKAP3O75969 853 aa19.75■□□□□ 0.75
PTX4-202ENST00000440447 CXCL14O95715 111 aa19.75■□□□□ 0.75
PTX4-202ENST00000440447 EFEMP2O95967 443 aa19.75■□□□□ 0.75
PTX4-202ENST00000440447 URODP06132 367 aa19.75■□□□□ 0.75
PTX4-202ENST00000440447 CTSAP10619 480 aa19.75■□□□□ 0.75
PTX4-202ENST00000440447 USP41Q3LFD5 358 aa19.75■□□□□ 0.75
PTX4-202ENST00000440447 C9orf57Q5W0N0 161 aa19.75■□□□□ 0.75
PTX4-202ENST00000440447 KIAA1841Q6NSI8 718 aa19.75■□□□□ 0.75
PTX4-202ENST00000440447 FOXR2Q6PJQ5 311 aa19.75■□□□□ 0.75
PTX4-202ENST00000440447 CD300LGQ6UXG3 332 aa19.75■□□□□ 0.75
PTX4-202ENST00000440447 TAS1R1Q7RTX1 841 aa19.75■□□□□ 0.75
PTX4-202ENST00000440447 USP37Q86T82 979 aa19.75■□□□□ 0.75
PTX4-202ENST00000440447 RNF168Q8IYW5 571 aaPredicted RBP19.75■□□□□ 0.75
PTX4-202ENST00000440447 PARD3BQ8TEW8 1205 aa19.75■□□□□ 0.75
PTX4-202ENST00000440447 MKNK1Q9BUB5 465 aa19.75■□□□□ 0.75
PTX4-202ENST00000440447 MTMR12Q9C0I1 747 aa19.75■□□□□ 0.75
PTX4-202ENST00000440447 DACH1Q9UI36 760 aa19.75■□□□□ 0.75
PTX4-202ENST00000440447 SSX2IPQ9Y2D8 614 aa19.75■□□□□ 0.75
PTX4-202ENST00000440447 ANO9A1A5B4 782 aa19.74■□□□□ 0.75
PTX4-202ENST00000440447 PIRO00625 290 aa19.74■□□□□ 0.75
PTX4-202ENST00000440447 EPB41P11171 864 aaKnown RBP19.74■□□□□ 0.75
PTX4-202ENST00000440447 KRT13P13646 458 aa19.74■□□□□ 0.75
PTX4-202ENST00000440447 PAX3P23760 479 aa19.74■□□□□ 0.75
PTX4-202ENST00000440447 IGFBP6P24592 240 aaPredicted RBP19.74■□□□□ 0.75
PTX4-202ENST00000440447 BRCC3P46736 316 aa19.74■□□□□ 0.75
PTX4-202ENST00000440447 STX17P56962 302 aa19.74■□□□□ 0.75
PTX4-202ENST00000440447 KLHL40Q2TBA0 621 aa19.74■□□□□ 0.75
PTX4-202ENST00000440447 FAM171A1Q5VUB5 890 aa19.74■□□□□ 0.75
PTX4-202ENST00000440447 TTI2Q6NXR4 508 aa19.74■□□□□ 0.75
PTX4-202ENST00000440447 CAVIN1Q6NZI2 390 aaKnown RBP19.74■□□□□ 0.75
PTX4-202ENST00000440447 SASS6Q6UVJ0 657 aa19.74■□□□□ 0.75
PTX4-202ENST00000440447 INTS8Q75QN2 995 aaKnown RBP19.74■□□□□ 0.75
PTX4-202ENST00000440447 ZC3H3Q8IXZ2 948 aaKnown RBP19.74■□□□□ 0.75
PTX4-202ENST00000440447 CSGALNACT2Q8N6G5 542 aa19.74■□□□□ 0.75
PTX4-202ENST00000440447 OR5B17Q8NGF7 314 aa19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms