RNA–Protein interactions for RNA: ENST00000440118.1

SHROOM1-204, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 1,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-204ENST00000440118 RPF1Q9H9Y2 349 aaKnown RBP21.64■■□□□ 1.05
SHROOM1-204ENST00000440118 MTRRQ9UBK8 725 aa21.64■■□□□ 1.05
SHROOM1-204ENST00000440118 XPOTO43592 962 aaKnown RBP21.63■■□□□ 1.05
SHROOM1-204ENST00000440118 XYLBO75191 536 aa21.63■■□□□ 1.05
SHROOM1-204ENST00000440118 SPAG1Q07617 926 aa21.63■■□□□ 1.05
SHROOM1-204ENST00000440118 SLC39A14Q15043 492 aa21.63■■□□□ 1.05
SHROOM1-204ENST00000440118 FOXD4L5Q5VV16 416 aaPredicted RBP21.63■■□□□ 1.05
SHROOM1-204ENST00000440118 LILRA6Q6PI73 481 aa21.63■■□□□ 1.05
SHROOM1-204ENST00000440118 SFR1Q86XK3 245 aa21.63■■□□□ 1.05
SHROOM1-204ENST00000440118 SLC7A14Q8TBB6 771 aa21.63■■□□□ 1.05
SHROOM1-204ENST00000440118 FOXD4L4Q8WXT5 416 aaPredicted RBP21.63■■□□□ 1.05
SHROOM1-204ENST00000440118 ZNF707Q96C28 371 aaPredicted RBP21.63■■□□□ 1.05
SHROOM1-204ENST00000440118 RHOBTB2Q9BYZ6 727 aa21.63■■□□□ 1.05
SHROOM1-204ENST00000440118 PLEKHA5Q9HAU0 1116 aa21.63■■□□□ 1.05
SHROOM1-204ENST00000440118 TUBGCP4Q9UGJ1 667 aa21.63■■□□□ 1.05
SHROOM1-204ENST00000440118 ARIH1Q9Y4X5 557 aaPredicted RBP21.63■■□□□ 1.05
SHROOM1-204ENST00000440118 GTF3C5Q9Y5Q8 519 aaPredicted RBP21.63■■□□□ 1.05
SHROOM1-204ENST00000440118 DOCK8Q8NF50 2099 aa21.62■■□□□ 1.05
SHROOM1-204ENST00000440118 OGTO15294 1046 aa21.62■■□□□ 1.05
SHROOM1-204ENST00000440118 TNFSF9P41273 254 aa21.62■■□□□ 1.05
SHROOM1-204ENST00000440118 VARS2Q5ST30 1063 aaKnown RBP21.62■■□□□ 1.05
SHROOM1-204ENST00000440118 BMP8AQ7Z5Y6 402 aa21.62■■□□□ 1.05
SHROOM1-204ENST00000440118 FBXL6Q8N531 539 aa21.62■■□□□ 1.05
SHROOM1-204ENST00000440118 DDX12PQ92771 950 aa21.62■■□□□ 1.05
SHROOM1-204ENST00000440118 MRPL44Q9H9J2 332 aaKnown RBP21.62■■□□□ 1.05
SHROOM1-204ENST00000440118 KMT2EQ8IZD2 1858 aa21.61■■□□□ 1.05
SHROOM1-204ENST00000440118 H7C4K7 107 aa21.61■■□□□ 1.05
SHROOM1-204ENST00000440118 TULP1O00294 542 aaPredicted RBP21.61■■□□□ 1.05
SHROOM1-204ENST00000440118 SYN3O14994 580 aa21.61■■□□□ 1.05
SHROOM1-204ENST00000440118 CCL16O15467 120 aa21.61■■□□□ 1.05
SHROOM1-204ENST00000440118 ADAM12O43184 909 aa21.61■■□□□ 1.05
SHROOM1-204ENST00000440118 PIGRP01833 764 aa21.61■■□□□ 1.05
SHROOM1-204ENST00000440118 HNRNPA1P09651 372 aaKnown RBP eCLIP21.61■■□□□ 1.05
SHROOM1-204ENST00000440118 IDEP14735 1019 aa21.61■■□□□ 1.05
SHROOM1-204ENST00000440118 IGFBP6P24592 240 aaPredicted RBP21.61■■□□□ 1.05
SHROOM1-204ENST00000440118 ARPP19P56211 112 aa21.61■■□□□ 1.05
SHROOM1-204ENST00000440118 RAB33AQ14088 237 aa21.61■■□□□ 1.05
SHROOM1-204ENST00000440118 ZC2HC1CQ53FD0 456 aaPredicted RBP21.61■■□□□ 1.05
SHROOM1-204ENST00000440118 MAP4K3Q8IVH8 894 aa21.61■■□□□ 1.05
SHROOM1-204ENST00000440118 PDILTQ8N807 584 aa21.61■■□□□ 1.05
SHROOM1-204ENST00000440118 PANK2Q9BZ23 570 aa21.61■■□□□ 1.05
SHROOM1-204ENST00000440118 HAPLN2Q9GZV7 340 aa21.61■■□□□ 1.05
SHROOM1-204ENST00000440118 MFSD1Q9H3U5 465 aa21.61■■□□□ 1.05
SHROOM1-204ENST00000440118 UBQLN1Q9UMX0 589 aaKnown RBP21.61■■□□□ 1.05
SHROOM1-204ENST00000440118 BACE2Q9Y5Z0 518 aa21.61■■□□□ 1.05
SHROOM1-204ENST00000440118 DOCK6Q96HP0 2047 aa21.61■■□□□ 1.05
SHROOM1-204ENST00000440118 ANK1P16157 1881 aa21.6■■□□□ 1.05
SHROOM1-204ENST00000440118 GAP43P17677 238 aa21.6■■□□□ 1.05
SHROOM1-204ENST00000440118 ELF1P32519 619 aa21.6■■□□□ 1.05
SHROOM1-204ENST00000440118 NASPP49321 788 aaPredicted RBP21.6■■□□□ 1.05
SHROOM1-204ENST00000440118 GTF2BQ00403 316 aa21.6■■□□□ 1.05
SHROOM1-204ENST00000440118 AXDND1Q5T1B0 1012 aaPredicted RBP21.6■■□□□ 1.05
SHROOM1-204ENST00000440118 ADALQ6DHV7 355 aa21.6■■□□□ 1.05
SHROOM1-204ENST00000440118 ZNF280DQ6N043 979 aa21.6■■□□□ 1.05
SHROOM1-204ENST00000440118 CD300LGQ6UXG3 332 aa21.6■■□□□ 1.05
SHROOM1-204ENST00000440118 APPL2Q8NEU8 664 aa21.6■■□□□ 1.05
SHROOM1-204ENST00000440118 KCNN1Q92952 543 aa21.6■■□□□ 1.05
SHROOM1-204ENST00000440118 ASIC4Q96FT7 647 aa21.6■■□□□ 1.05
SHROOM1-204ENST00000440118 SMOC2Q9H3U7 446 aa21.6■■□□□ 1.05
SHROOM1-204ENST00000440118 SEL1LQ9UBV2 794 aa21.6■■□□□ 1.05
SHROOM1-204ENST00000440118 EXOC7Q9UPT5 735 aa21.6■■□□□ 1.05
SHROOM1-204ENST00000440118 TTC26A0AVF1 554 aa21.59■■□□□ 1.05
SHROOM1-204ENST00000440118 PRRG1O14668 218 aa21.59■■□□□ 1.05
SHROOM1-204ENST00000440118 SPTLC2O15270 562 aa21.59■■□□□ 1.05
SHROOM1-204ENST00000440118 MEFVO15553 781 aaPredicted RBP21.59■■□□□ 1.05
SHROOM1-204ENST00000440118 FSHRP23945 695 aa21.59■■□□□ 1.05
SHROOM1-204ENST00000440118 TDGQ13569 410 aa21.59■■□□□ 1.05
SHROOM1-204ENST00000440118 ENOX2Q16206 610 aaKnown RBP21.59■■□□□ 1.05
SHROOM1-204ENST00000440118 FOXD4L6Q3SYB3 417 aaPredicted RBP21.59■■□□□ 1.05
SHROOM1-204ENST00000440118 CTXN3Q4LDR2 81 aa21.59■■□□□ 1.05
SHROOM1-204ENST00000440118 ZBTB41Q5SVQ8 909 aa21.59■■□□□ 1.05
SHROOM1-204ENST00000440118 SLFN12LQ6IEE8 588 aa21.59■■□□□ 1.05
SHROOM1-204ENST00000440118 FOXD4L3Q6VB84 417 aaPredicted RBP21.59■■□□□ 1.05
SHROOM1-204ENST00000440118 GRASPQ7Z6J2 395 aaPredicted RBP21.59■■□□□ 1.05
SHROOM1-204ENST00000440118 HVCN1Q96D96 273 aa21.59■■□□□ 1.05
SHROOM1-204ENST00000440118 KCNK12Q9HB15 430 aa21.59■■□□□ 1.05
SHROOM1-204ENST00000440118 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP21.59■■□□□ 1.052e-17■□□□□ 8.7
SHROOM1-204ENST00000440118 TBC1D7Q9P0N9 293 aa21.59■■□□□ 1.05
SHROOM1-204ENST00000440118 IGSF9Q9P2J2 1179 aa21.59■■□□□ 1.05
SHROOM1-204ENST00000440118 FBXL21Q9UKT6 434 aa21.59■■□□□ 1.05
SHROOM1-204ENST00000440118 MORC2Q9Y6X9 1032 aaPredicted RBP21.59■■□□□ 1.05
SHROOM1-204ENST00000440118 TCHHQ07283 1943 aa21.59■■□□□ 1.05
SHROOM1-204ENST00000440118 A0A0B4J269 797 aa21.58■■□□□ 1.05
SHROOM1-204ENST00000440118 MYMKA6NI61 221 aa21.58■■□□□ 1.05
SHROOM1-204ENST00000440118 LACTBL1A8MY62 500 aa21.58■■□□□ 1.05
SHROOM1-204ENST00000440118 GCNT3O95395 438 aa21.58■■□□□ 1.05
SHROOM1-204ENST00000440118 PDIA4P13667 645 aaKnown RBP21.58■■□□□ 1.05
SHROOM1-204ENST00000440118 HOXA9P31269 272 aa21.58■■□□□ 1.05
SHROOM1-204ENST00000440118 ROR1Q01973 937 aa21.58■■□□□ 1.05
SHROOM1-204ENST00000440118 CD302Q8IX05 232 aa21.58■■□□□ 1.05
SHROOM1-204ENST00000440118 SPRYD3Q8NCJ5 442 aa21.58■■□□□ 1.05
SHROOM1-204ENST00000440118 BEST2Q8NFU1 509 aa21.58■■□□□ 1.05
SHROOM1-204ENST00000440118 POMGNT1Q8WZA1 660 aa21.58■■□□□ 1.05
SHROOM1-204ENST00000440118 SUSD3Q96L08 255 aa21.58■■□□□ 1.05
SHROOM1-204ENST00000440118 KCNH6Q9H252 994 aa21.58■■□□□ 1.05
SHROOM1-204ENST00000440118 TFIP11Q9UBB9 837 aaKnown RBP21.58■■□□□ 1.05
SHROOM1-204ENST00000440118 LRG1P02750 347 aa21.57■■□□□ 1.04
SHROOM1-204ENST00000440118 SLC39A4Q6P5W5 647 aa21.57■■□□□ 1.04
SHROOM1-204ENST00000440118 RSPO2Q6UXX9 243 aaPredicted RBP21.57■■□□□ 1.04
SHROOM1-204ENST00000440118 DSTYKQ6XUX3 929 aa21.57■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms