RNA–Protein interactions for RNA: ENST00000439724.7

SMAD3-202, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-202ENST00000439724 MAP2K5Q13163 448 aa12.62□□□□□ -0.39
SMAD3-202ENST00000439724 GRIK4Q16099 956 aa12.62□□□□□ -0.39
SMAD3-202ENST00000439724 AMHR2Q16671 573 aa12.62□□□□□ -0.39
SMAD3-202ENST00000439724 DGKDQ16760 1214 aa12.62□□□□□ -0.39
SMAD3-202ENST00000439724 ZNF653Q96CK0 615 aa12.62□□□□□ -0.39
SMAD3-202ENST00000439724 ZNF668Q96K58 619 aaPredicted RBP12.62□□□□□ -0.39
SMAD3-202ENST00000439724 FDXACB1Q9BRP7 624 aaPredicted RBP12.62□□□□□ -0.39
SMAD3-202ENST00000439724 MTMR12Q9C0I1 747 aa12.62□□□□□ -0.39
SMAD3-202ENST00000439724 AVENQ9NQS1 362 aaPredicted RBP12.62□□□□□ -0.39
SMAD3-202ENST00000439724 STIM2Q9P246 746 aa12.62□□□□□ -0.39
SMAD3-202ENST00000439724 DMGDHQ9UI17 866 aaKnown RBP12.62□□□□□ -0.39
SMAD3-202ENST00000439724 CPA4Q9UI42 421 aa12.62□□□□□ -0.39
SMAD3-202ENST00000439724 NOC2LQ9Y3T9 749 aaKnown RBP12.62□□□□□ -0.39
SMAD3-202ENST00000439724 PCDHB4Q9Y5E5 795 aa12.62□□□□□ -0.39
SMAD3-202ENST00000439724 MGAMO43451 1857 aa12.62□□□□□ -0.39
SMAD3-202ENST00000439724 UMODL1Q5DID0 1318 aa12.61□□□□□ -0.39
SMAD3-202ENST00000439724 KAT6AQ92794 2004 aa12.61□□□□□ -0.39
SMAD3-202ENST00000439724 CCDC188H7C350 402 aa12.61□□□□□ -0.39
SMAD3-202ENST00000439724 IGF2BP3O00425 579 aaKnown RBP eCLIP12.61□□□□□ -0.39
SMAD3-202ENST00000439724 ZEB2O60315 1214 aa12.61□□□□□ -0.39
SMAD3-202ENST00000439724 IQCF3P0C7M6 154 aa12.61□□□□□ -0.39
SMAD3-202ENST00000439724 MYBL1P10243 752 aa12.61□□□□□ -0.39
SMAD3-202ENST00000439724 ZNF132P52740 706 aa12.61□□□□□ -0.39
SMAD3-202ENST00000439724 CENPCQ03188 943 aa12.61□□□□□ -0.39
SMAD3-202ENST00000439724 CLUL1Q15846 466 aa12.61□□□□□ -0.39
SMAD3-202ENST00000439724 KYAT1Q16773 422 aa12.61□□□□□ -0.39
SMAD3-202ENST00000439724 PTPROQ16827 1216 aa12.61□□□□□ -0.39
SMAD3-202ENST00000439724 TMEM132AQ24JP5 1023 aa12.61□□□□□ -0.39
SMAD3-202ENST00000439724 SGSM1Q2NKQ1 1148 aa12.61□□□□□ -0.39
SMAD3-202ENST00000439724 PPP1R2P3Q6NXS1 205 aa12.61□□□□□ -0.39
SMAD3-202ENST00000439724 ZNF410Q86VK4 478 aa12.61□□□□□ -0.39
SMAD3-202ENST00000439724 EFCAB13Q8IY85 973 aa12.61□□□□□ -0.39
SMAD3-202ENST00000439724 THNSL1Q8IYQ7 743 aa12.61□□□□□ -0.39
SMAD3-202ENST00000439724 RBBP8NLQ8NC74 664 aaPredicted RBP12.61□□□□□ -0.39
SMAD3-202ENST00000439724 ZNF564Q8TBZ8 553 aaPredicted RBP12.61□□□□□ -0.39
SMAD3-202ENST00000439724 HDAC7Q8WUI4 952 aa12.61□□□□□ -0.39
SMAD3-202ENST00000439724 TRIM11Q96F44 468 aa12.61□□□□□ -0.39
SMAD3-202ENST00000439724 NUP85Q9BW27 656 aa12.61□□□□□ -0.39
SMAD3-202ENST00000439724 NIF3L1Q9GZT8 377 aa12.61□□□□□ -0.39
SMAD3-202ENST00000439724 RPF1Q9H9Y2 349 aaKnown RBP12.61□□□□□ -0.39
SMAD3-202ENST00000439724 NMRK2Q9NPI5 230 aa12.61□□□□□ -0.39
SMAD3-202ENST00000439724 AKT3Q9Y243 479 aa12.61□□□□□ -0.39
SMAD3-202ENST00000439724 ALG6Q9Y672 507 aa12.61□□□□□ -0.39
SMAD3-202ENST00000439724 RRN3P2A6NIE6 340 aa12.6□□□□□ -0.39
SMAD3-202ENST00000439724 GPR25O00155 361 aa12.6□□□□□ -0.39
SMAD3-202ENST00000439724 ADCY6O43306 1168 aa12.6□□□□□ -0.39
SMAD3-202ENST00000439724 ZMYND10O75800 440 aa12.6□□□□□ -0.39
SMAD3-202ENST00000439724 CST3P01034 146 aaPredicted RBP12.6□□□□□ -0.39
SMAD3-202ENST00000439724 TNNC2P02585 160 aa12.6□□□□□ -0.39
SMAD3-202ENST00000439724 TMEM191BP0C7N4 346 aa12.6□□□□□ -0.39
SMAD3-202ENST00000439724 MYL6P60660 151 aa12.6□□□□□ -0.39
SMAD3-202ENST00000439724 CASP8Q14790 479 aa12.6□□□□□ -0.39
SMAD3-202ENST00000439724 TAF1CQ15572 869 aaPredicted RBP12.6□□□□□ -0.39
SMAD3-202ENST00000439724 MARCH8Q5T0T0 291 aa12.6□□□□□ -0.39
SMAD3-202ENST00000439724 DCAF12L1Q5VU92 463 aa12.6□□□□□ -0.39
SMAD3-202ENST00000439724 CHADLQ6NUI6 762 aa12.6□□□□□ -0.39
SMAD3-202ENST00000439724 TMEM270Q6UE05 265 aa12.6□□□□□ -0.39
SMAD3-202ENST00000439724 ILDR2Q71H61 639 aa12.6□□□□□ -0.39
SMAD3-202ENST00000439724 MCOLN2Q8IZK6 566 aa12.6□□□□□ -0.39
SMAD3-202ENST00000439724 CEP120Q8N960 986 aa12.6□□□□□ -0.39
SMAD3-202ENST00000439724 AENQ8WTP8 325 aaKnown RBP12.6□□□□□ -0.39
SMAD3-202ENST00000439724 FAM212AQ96EL1 285 aa12.6□□□□□ -0.39
SMAD3-202ENST00000439724 ANKRD36BP1Q96IX9 119 aa12.6□□□□□ -0.39
SMAD3-202ENST00000439724 WNT8AQ9H1J5 351 aa12.6□□□□□ -0.39
SMAD3-202ENST00000439724 PDZD7Q9H5P4 517 aa12.6□□□□□ -0.39
SMAD3-202ENST00000439724 VIPAS39Q9H9C1 493 aa12.6□□□□□ -0.39
SMAD3-202ENST00000439724 GNEQ9Y223 722 aaKnown RBP12.6□□□□□ -0.39
SMAD3-202ENST00000439724 DOCK3Q8IZD9 2030 aa12.6□□□□□ -0.39
SMAD3-202ENST00000439724 A6NJR5 290 aa12.59□□□□□ -0.39
SMAD3-202ENST00000439724 ATMINO43313 823 aaPredicted RBP12.59□□□□□ -0.39
SMAD3-202ENST00000439724 CALCAP01258 141 aa12.59□□□□□ -0.39
SMAD3-202ENST00000439724 VTNP04004 478 aa12.59□□□□□ -0.39
SMAD3-202ENST00000439724 MYBL2P10244 700 aa12.59□□□□□ -0.39
SMAD3-202ENST00000439724 CTNNA2P26232 953 aa12.59□□□□□ -0.39
SMAD3-202ENST00000439724 GNA15P30679 374 aa12.59□□□□□ -0.39
SMAD3-202ENST00000439724 ZNF157P51786 506 aaPredicted RBP12.59□□□□□ -0.39
SMAD3-202ENST00000439724 RNASE9P60153 205 aaKnown RBP12.59□□□□□ -0.39
SMAD3-202ENST00000439724 TFAMQ00059 246 aaKnown RBP12.59□□□□□ -0.39
SMAD3-202ENST00000439724 TRPC3Q13507 836 aa12.59□□□□□ -0.39
SMAD3-202ENST00000439724 IFT20Q8IY31 132 aa12.59□□□□□ -0.39
SMAD3-202ENST00000439724 UBL4BQ8N7F7 174 aa12.59□□□□□ -0.39
SMAD3-202ENST00000439724 USP6NLQ92738 828 aa12.59□□□□□ -0.39
SMAD3-202ENST00000439724 CD101Q93033 1021 aa12.59□□□□□ -0.39
SMAD3-202ENST00000439724 FAXDC2Q96IV6 333 aa12.59□□□□□ -0.39
SMAD3-202ENST00000439724 KRT12Q99456 494 aa12.59□□□□□ -0.39
SMAD3-202ENST00000439724 ZSWIM1Q9BR11 485 aa12.59□□□□□ -0.39
SMAD3-202ENST00000439724 XYLT2Q9H1B5 865 aa12.59□□□□□ -0.39
SMAD3-202ENST00000439724 GDF3Q9NR23 364 aa12.59□□□□□ -0.39
SMAD3-202ENST00000439724 CNOT8Q9UFF9 292 aaKnown RBP12.59□□□□□ -0.39
SMAD3-202ENST00000439724 FAM170AA1A519 330 aa12.58□□□□□ -0.4
SMAD3-202ENST00000439724 HEXIM1O94992 359 aaKnown RBP12.58□□□□□ -0.4
SMAD3-202ENST00000439724 F2P00734 622 aa12.58□□□□□ -0.4
SMAD3-202ENST00000439724 ZNF865P0CJ78 1059 aaPredicted RBP12.58□□□□□ -0.4
SMAD3-202ENST00000439724 STAG3L1P0CL83 205 aa12.58□□□□□ -0.4
SMAD3-202ENST00000439724 CXCL8P10145 99 aa12.58□□□□□ -0.4
SMAD3-202ENST00000439724 ARF4P18085 180 aaPredicted RBP12.58□□□□□ -0.4
SMAD3-202ENST00000439724 COMTP21964 271 aa12.58□□□□□ -0.4
SMAD3-202ENST00000439724 NSFP46459 744 aaKnown RBP12.58□□□□□ -0.4
SMAD3-202ENST00000439724 NOMO3P69849 1222 aa12.58□□□□□ -0.4
SMAD3-202ENST00000439724 SLC7A5Q01650 507 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms