RNA–Protein interactions for RNA: ENST00000439541.6

CBX5-202, Transcript of chromobox 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX5, Length 1,832 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5-202ENST00000439541 ARHGEF19Q8IW93 802 aa10.79□□□□□ -0.68
CBX5-202ENST00000439541 USP38Q8NB14 1042 aa10.79□□□□□ -0.68
CBX5-202ENST00000439541 KAT5Q92993 513 aa10.79□□□□□ -0.68
CBX5-202ENST00000439541 TMEM39AQ9NV64 488 aa10.79□□□□□ -0.68
CBX5-202ENST00000439541 TUBGCP4Q9UGJ1 667 aa10.79□□□□□ -0.68
CBX5-202ENST00000439541 PLAGL2Q9UPG8 496 aa10.79□□□□□ -0.68
CBX5-202ENST00000439541 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.79□□□□□ -0.682e-6■□□□□ 8.3
CBX5-202ENST00000439541 TRIM43BA6NCK2 446 aa10.79□□□□□ -0.68
CBX5-202ENST00000439541 STX10O60499 249 aa10.79□□□□□ -0.68
CBX5-202ENST00000439541 CLSTN1O94985 981 aa10.79□□□□□ -0.68
CBX5-202ENST00000439541 IL18RAPO95256 599 aa10.79□□□□□ -0.68
CBX5-202ENST00000439541 TMEM191BP0C7N4 346 aa10.79□□□□□ -0.68
CBX5-202ENST00000439541 GTF2H1P32780 548 aa10.79□□□□□ -0.68
CBX5-202ENST00000439541 MLH1P40692 756 aa10.79□□□□□ -0.68
CBX5-202ENST00000439541 YARSP54577 528 aaKnown RBP10.79□□□□□ -0.68
CBX5-202ENST00000439541 BMS1Q14692 1282 aaKnown RBP10.79□□□□□ -0.68
CBX5-202ENST00000439541 TMEM132DQ14C87 1099 aa10.79□□□□□ -0.68
CBX5-202ENST00000439541 ELF2Q15723 593 aa10.79□□□□□ -0.68
CBX5-202ENST00000439541 KLHDC7AQ5VTJ3 777 aa10.79□□□□□ -0.68
CBX5-202ENST00000439541 IQCEQ6IPM2 695 aa10.79□□□□□ -0.68
CBX5-202ENST00000439541 RTN4RL1Q86UN2 441 aaPredicted RBP10.79□□□□□ -0.68
CBX5-202ENST00000439541 FBXL13Q8NEE6 735 aa10.79□□□□□ -0.68
CBX5-202ENST00000439541 DBF4BQ8NFT6 615 aa10.79□□□□□ -0.68
CBX5-202ENST00000439541 BAP1Q92560 729 aa10.79□□□□□ -0.68
CBX5-202ENST00000439541 C18orf25Q96B23 403 aaPredicted RBP10.79□□□□□ -0.68
CBX5-202ENST00000439541 TRIM43Q96BQ3 446 aaPredicted RBP10.79□□□□□ -0.68
CBX5-202ENST00000439541 KIF12Q96FN5 646 aa10.79□□□□□ -0.68
CBX5-202ENST00000439541 CHST12Q9NRB3 414 aa10.79□□□□□ -0.68
CBX5-202ENST00000439541 CACNG4Q9UBN1 327 aa10.79□□□□□ -0.68
CBX5-202ENST00000439541 ALPK3Q96L96 1907 aa10.78□□□□□ -0.68
CBX5-202ENST00000439541 CITO14578 2027 aa10.78□□□□□ -0.68
CBX5-202ENST00000439541 AKR1B15C9JRZ8 316 aaPredicted RBP10.78□□□□□ -0.68
CBX5-202ENST00000439541 UCHL3P15374 230 aa10.78□□□□□ -0.68
CBX5-202ENST00000439541 KRT9P35527 623 aa10.78□□□□□ -0.68
CBX5-202ENST00000439541 ENPEPQ07075 957 aa10.78□□□□□ -0.68
CBX5-202ENST00000439541 RAPGEF1Q13905 1077 aa10.78□□□□□ -0.68
CBX5-202ENST00000439541 TRIM14Q14142 442 aa10.78□□□□□ -0.68
CBX5-202ENST00000439541 NAA30Q147X3 362 aaPredicted RBP10.78□□□□□ -0.68
CBX5-202ENST00000439541 KYAT1Q16773 422 aa10.78□□□□□ -0.68
CBX5-202ENST00000439541 PLEKHG4Q58EX7 1191 aa10.78□□□□□ -0.68
CBX5-202ENST00000439541 PHLDB3Q6NSJ2 640 aa10.78□□□□□ -0.68
CBX5-202ENST00000439541 AGMOQ6ZNB7 445 aa10.78□□□□□ -0.68
CBX5-202ENST00000439541 RRAGAQ7L523 313 aa10.78□□□□□ -0.68
CBX5-202ENST00000439541 TRAPPC11Q7Z392 1133 aa10.78□□□□□ -0.68
CBX5-202ENST00000439541 C1orf127Q8N9H9 656 aa10.78□□□□□ -0.68
CBX5-202ENST00000439541 VWCEQ96DN2 955 aa10.78□□□□□ -0.68
CBX5-202ENST00000439541 GOLGA2P5Q9HBQ8 144 aa10.78□□□□□ -0.68
CBX5-202ENST00000439541 APOBEC3GQ9HC16 384 aaKnown RBP10.78□□□□□ -0.68
CBX5-202ENST00000439541 ABHD10Q9NUJ1 306 aa10.78□□□□□ -0.68
CBX5-202ENST00000439541 RAB20Q9NX57 234 aa10.78□□□□□ -0.68
CBX5-202ENST00000439541 CNTN3Q9P232 1028 aa10.78□□□□□ -0.68
CBX5-202ENST00000439541 SIX4Q9UIU6 781 aa10.78□□□□□ -0.68
CBX5-202ENST00000439541 CAPN11Q9UMQ6 739 aa10.78□□□□□ -0.68
CBX5-202ENST00000439541 COQ4Q9Y3A0 265 aa10.78□□□□□ -0.68
CBX5-202ENST00000439541 SQORQ9Y6N5 450 aa10.78□□□□□ -0.68
CBX5-202ENST00000439541 LRRC53A6NM62 1247 aa10.77□□□□□ -0.68
CBX5-202ENST00000439541 PTGESO14684 152 aa10.77□□□□□ -0.68
CBX5-202ENST00000439541 PPEF2O14830 753 aa10.77□□□□□ -0.68
CBX5-202ENST00000439541 P4HA2O15460 535 aa10.77□□□□□ -0.68
CBX5-202ENST00000439541 PHACTR2O75167 634 aa10.77□□□□□ -0.68
CBX5-202ENST00000439541 CST3P01034 146 aaPredicted RBP10.77□□□□□ -0.68
CBX5-202ENST00000439541 TNNC2P02585 160 aa10.77□□□□□ -0.68
CBX5-202ENST00000439541 ITGB3P05106 788 aa10.77□□□□□ -0.68
CBX5-202ENST00000439541 KRT19P08727 400 aa10.77□□□□□ -0.68
CBX5-202ENST00000439541 ITGA4P13612 1032 aa10.77□□□□□ -0.68
CBX5-202ENST00000439541 H2AFXP16104 143 aaPredicted RBP10.77□□□□□ -0.68
CBX5-202ENST00000439541 MYL6P60660 151 aa10.77□□□□□ -0.68
CBX5-202ENST00000439541 NCOA4Q13772 614 aa10.77□□□□□ -0.68
CBX5-202ENST00000439541 DUOXA2Q1HG44 320 aa10.77□□□□□ -0.68
CBX5-202ENST00000439541 FIGNQ5HY92 759 aa10.77□□□□□ -0.68
CBX5-202ENST00000439541 FBXO38Q6PIJ6 1188 aa10.77□□□□□ -0.68
CBX5-202ENST00000439541 ALKAL1Q6UXT8 129 aa10.77□□□□□ -0.68
CBX5-202ENST00000439541 CACNA2D4Q7Z3S7 1137 aa10.77□□□□□ -0.68
CBX5-202ENST00000439541 EHBP1Q8NDI1 1231 aa10.77□□□□□ -0.68
CBX5-202ENST00000439541 MNS1Q8NEH6 495 aa10.77□□□□□ -0.68
CBX5-202ENST00000439541 TET1Q8NFU7 2136 aa10.77□□□□□ -0.68
CBX5-202ENST00000439541 UBXN4Q92575 508 aa10.77□□□□□ -0.68
CBX5-202ENST00000439541 TATDN2Q93075 761 aa10.77□□□□□ -0.68
CBX5-202ENST00000439541 ANKRD36BP1Q96IX9 119 aa10.77□□□□□ -0.68
CBX5-202ENST00000439541 GAD1Q99259 594 aa10.77□□□□□ -0.68
CBX5-202ENST00000439541 BAG1Q99933 345 aaPredicted RBP10.77□□□□□ -0.68
CBX5-202ENST00000439541 ASB7Q9H672 318 aa10.77□□□□□ -0.68
CBX5-202ENST00000439541 PLCB1Q9NQ66 1216 aa10.77□□□□□ -0.68
CBX5-202ENST00000439541 FAM53CQ9NYF3 392 aa10.77□□□□□ -0.68
CBX5-202ENST00000439541 CEP72Q9P209 647 aa10.77□□□□□ -0.68
CBX5-202ENST00000439541 APEX2Q9UBZ4 518 aa10.77□□□□□ -0.68
CBX5-202ENST00000439541 DNAI1Q9UI46 699 aa10.77□□□□□ -0.68
CBX5-202ENST00000439541 A0A0U1RQF3 1178 aa10.77□□□□□ -0.69
CBX5-202ENST00000439541 SMIM28A0A1B0GU29 152 aa10.77□□□□□ -0.69
CBX5-202ENST00000439541 EFCAB8A8MWE9 144 aa10.77□□□□□ -0.69
CBX5-202ENST00000439541 PMM2O15305 246 aa10.77□□□□□ -0.69
CBX5-202ENST00000439541 POLR2BP30876 1174 aaKnown RBP10.77□□□□□ -0.69
CBX5-202ENST00000439541 SCNN1GP51170 649 aa10.77□□□□□ -0.69
CBX5-202ENST00000439541 NOP14P78316 857 aaKnown RBP10.77□□□□□ -0.69
CBX5-202ENST00000439541 SOX4Q06945 474 aaPredicted RBP10.77□□□□□ -0.69
CBX5-202ENST00000439541 CETN1Q12798 172 aa10.77□□□□□ -0.69
CBX5-202ENST00000439541 SURF1Q15526 300 aa10.77□□□□□ -0.69
CBX5-202ENST00000439541 ARHGAP44Q17R89 818 aa10.77□□□□□ -0.69
CBX5-202ENST00000439541 TAF3Q5VWG9 929 aa10.77□□□□□ -0.69
CBX5-202ENST00000439541 PDXDC1Q6P996 788 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms