RNA–Protein interactions for RNA: ENST00000437983.2

SMAD9-IT1-201, SMAD9 intronic transcript 1, humanhuman

TSL 3 BASIC

Gene SMAD9-IT1, Length 504 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-IT1-201ENST00000437983 SETQ01105 290 aaPredicted RBP13.71□□□□□ -0.21
SMAD9-IT1-201ENST00000437983 CCINQ13939 588 aa13.71□□□□□ -0.21
SMAD9-IT1-201ENST00000437983 XKR3Q5GH77 459 aa13.71□□□□□ -0.21
SMAD9-IT1-201ENST00000437983 PLA2G4FQ68DD2 849 aa13.71□□□□□ -0.21
SMAD9-IT1-201ENST00000437983 SRGAP1Q7Z6B7 1085 aa13.71□□□□□ -0.21
SMAD9-IT1-201ENST00000437983 CHCHD4Q8N4Q1 142 aa13.71□□□□□ -0.21
SMAD9-IT1-201ENST00000437983 PRPF31Q8WWY3 499 aaKnown RBP13.71□□□□□ -0.21
SMAD9-IT1-201ENST00000437983 SMARCD2Q92925 531 aa13.71□□□□□ -0.21
SMAD9-IT1-201ENST00000437983 POM121Q96HA1 1249 aa13.71□□□□□ -0.21
SMAD9-IT1-201ENST00000437983 LRIG1Q96JA1 1093 aa13.71□□□□□ -0.21
SMAD9-IT1-201ENST00000437983 GIT1Q9Y2X7 761 aa13.71□□□□□ -0.21
SMAD9-IT1-201ENST00000437983 ASCC3Q8N3C0 2202 aaKnown RBP13.71□□□□□ -0.22
SMAD9-IT1-201ENST00000437983 VWA8A3KMH1 1905 aa13.7□□□□□ -0.22
SMAD9-IT1-201ENST00000437983 CNTNAP5Q8WYK1 1306 aa13.7□□□□□ -0.22
SMAD9-IT1-201ENST00000437983 MYBPHLA2RUH7 354 aa13.7□□□□□ -0.22
SMAD9-IT1-201ENST00000437983 CCDC69A6NI79 296 aa13.7□□□□□ -0.22
SMAD9-IT1-201ENST00000437983 DDX11L8A8MPP1 907 aa13.7□□□□□ -0.22
SMAD9-IT1-201ENST00000437983 HEPACAM2A8MVW5 462 aa13.7□□□□□ -0.22
SMAD9-IT1-201ENST00000437983 SPECC1L-ADORA2AF8WAN1 911 aa13.7□□□□□ -0.22
SMAD9-IT1-201ENST00000437983 MOSPD3O75425 235 aa13.7□□□□□ -0.22
SMAD9-IT1-201ENST00000437983 MLLT6P55198 1093 aaPredicted RBP13.7□□□□□ -0.22
SMAD9-IT1-201ENST00000437983 SCAPQ12770 1279 aa13.7□□□□□ -0.22
SMAD9-IT1-201ENST00000437983 PPP1R18Q6NYC8 613 aa13.7□□□□□ -0.22
SMAD9-IT1-201ENST00000437983 MFSD6LQ8IWD5 586 aa13.7□□□□□ -0.22
SMAD9-IT1-201ENST00000437983 GLIS3Q8NEA6 775 aa13.7□□□□□ -0.22
SMAD9-IT1-201ENST00000437983 CSGALNACT1Q8TDX6 532 aa13.7□□□□□ -0.22
SMAD9-IT1-201ENST00000437983 DEPDC1BQ8WUY9 529 aa13.7□□□□□ -0.22
SMAD9-IT1-201ENST00000437983 TMEM143Q96AN5 459 aa13.7□□□□□ -0.22
SMAD9-IT1-201ENST00000437983 MKNK1Q9BUB5 465 aa13.7□□□□□ -0.22
SMAD9-IT1-201ENST00000437983 SNTG2Q9NY99 539 aa13.7□□□□□ -0.22
SMAD9-IT1-201ENST00000437983 CDY1Q9Y6F8 540 aa13.7□□□□□ -0.22
SMAD9-IT1-201ENST00000437983 CCDC163A0A0D9SF12 145 aa13.69□□□□□ -0.22
SMAD9-IT1-201ENST00000437983 SH2B2O14492 632 aaPredicted RBP13.69□□□□□ -0.22
SMAD9-IT1-201ENST00000437983 MSH4O15457 936 aa13.69□□□□□ -0.22
SMAD9-IT1-201ENST00000437983 EDIL3O43854 480 aa13.69□□□□□ -0.22
SMAD9-IT1-201ENST00000437983 TSPAN1O60635 241 aa13.69□□□□□ -0.22
SMAD9-IT1-201ENST00000437983 AKAP3O75969 853 aa13.69□□□□□ -0.22
SMAD9-IT1-201ENST00000437983 CTHP32929 405 aa13.69□□□□□ -0.22
SMAD9-IT1-201ENST00000437983 RFC5P40937 340 aa13.69□□□□□ -0.22
SMAD9-IT1-201ENST00000437983 LAMTOR4Q0VGL1 99 aa13.69□□□□□ -0.22
SMAD9-IT1-201ENST00000437983 GRIK3Q13003 919 aa13.69□□□□□ -0.22
SMAD9-IT1-201ENST00000437983 ANO5Q75V66 913 aa13.69□□□□□ -0.22
SMAD9-IT1-201ENST00000437983 CDR2LQ86X02 465 aaPredicted RBP13.69□□□□□ -0.22
SMAD9-IT1-201ENST00000437983 FANCBQ8NB91 859 aa13.69□□□□□ -0.22
SMAD9-IT1-201ENST00000437983 ZSCAN18Q8TBC5 510 aaPredicted RBP13.69□□□□□ -0.22
SMAD9-IT1-201ENST00000437983 CXCL16Q9H2A7 254 aa13.69□□□□□ -0.22
SMAD9-IT1-201ENST00000437983 C8orf33Q9H7E9 229 aaPredicted RBP13.69□□□□□ -0.22
SMAD9-IT1-201ENST00000437983 GTSE1Q9NYZ3 720 aa13.69□□□□□ -0.22
SMAD9-IT1-201ENST00000437983 PCNX2A6NKB5 2137 aa13.69□□□□□ -0.22
SMAD9-IT1-201ENST00000437983 FAM221BA6H8Z2 402 aa13.68□□□□□ -0.22
SMAD9-IT1-201ENST00000437983 HIP1O00291 1037 aa13.68□□□□□ -0.22
SMAD9-IT1-201ENST00000437983 PRC1O43663 620 aa13.68□□□□□ -0.22
SMAD9-IT1-201ENST00000437983 CD46P15529 392 aa13.68□□□□□ -0.22
SMAD9-IT1-201ENST00000437983 NPEPPSP55786 919 aa13.68□□□□□ -0.22
SMAD9-IT1-201ENST00000437983 IRX4P78413 519 aa13.68□□□□□ -0.22
SMAD9-IT1-201ENST00000437983 SIM1P81133 766 aaPredicted RBP13.68□□□□□ -0.22
SMAD9-IT1-201ENST00000437983 PDZD4Q76G19 769 aaPredicted RBP13.68□□□□□ -0.22
SMAD9-IT1-201ENST00000437983 LURAP1LQ8IV03 231 aa13.68□□□□□ -0.22
SMAD9-IT1-201ENST00000437983 PLEKHM2Q8IWE5 1019 aa13.68□□□□□ -0.22
SMAD9-IT1-201ENST00000437983 SPIRE2Q8WWL2 714 aa13.68□□□□□ -0.22
SMAD9-IT1-201ENST00000437983 ZFYVE19Q96K21 471 aa13.68□□□□□ -0.22
SMAD9-IT1-201ENST00000437983 CSRNP2Q9H175 543 aa13.68□□□□□ -0.22
SMAD9-IT1-201ENST00000437983 BARHL2Q9NY43 387 aa13.68□□□□□ -0.22
SMAD9-IT1-201ENST00000437983 MTRRQ9UBK8 725 aa13.68□□□□□ -0.22
SMAD9-IT1-201ENST00000437983 V9GY48 417 aaPredicted RBP13.68□□□□□ -0.22
SMAD9-IT1-201ENST00000437983 APC2O95996 2303 aa13.67□□□□□ -0.22
SMAD9-IT1-201ENST00000437983 ARHGEF37A1IGU5 675 aa13.67□□□□□ -0.22
SMAD9-IT1-201ENST00000437983 PPP1R3GB7ZBB8 358 aa13.67□□□□□ -0.22
SMAD9-IT1-201ENST00000437983 C3orf80F5H4A9 247 aa13.67□□□□□ -0.22
SMAD9-IT1-201ENST00000437983 ZNF197O14709 1029 aa13.67□□□□□ -0.22
SMAD9-IT1-201ENST00000437983 KHNYNO15037 678 aaKnown RBP13.67□□□□□ -0.22
SMAD9-IT1-201ENST00000437983 MEFVO15553 781 aaPredicted RBP13.67□□□□□ -0.22
SMAD9-IT1-201ENST00000437983 GAS7O60861 476 aa13.67□□□□□ -0.22
SMAD9-IT1-201ENST00000437983 ERLIN2O94905 339 aa13.67□□□□□ -0.22
SMAD9-IT1-201ENST00000437983 LRG1P02750 347 aa13.67□□□□□ -0.22
SMAD9-IT1-201ENST00000437983 SFNP31947 248 aa13.67□□□□□ -0.22
SMAD9-IT1-201ENST00000437983 JAK3P52333 1124 aa13.67□□□□□ -0.22
SMAD9-IT1-201ENST00000437983 FAM193AP78312 1265 aa13.67□□□□□ -0.22
SMAD9-IT1-201ENST00000437983 FUT2Q10981 343 aa13.67□□□□□ -0.22
SMAD9-IT1-201ENST00000437983 ELF2Q15723 593 aa13.67□□□□□ -0.22
SMAD9-IT1-201ENST00000437983 LARP1BQ659C4 914 aaKnown RBP13.67□□□□□ -0.22
SMAD9-IT1-201ENST00000437983 CASC1Q6TDU7 716 aa13.67□□□□□ -0.22
SMAD9-IT1-201ENST00000437983 RTL10Q7L3V2 364 aa13.67□□□□□ -0.22
SMAD9-IT1-201ENST00000437983 MIER3Q7Z3K6 550 aa13.67□□□□□ -0.22
SMAD9-IT1-201ENST00000437983 MICU3Q86XE3 530 aa13.67□□□□□ -0.22
SMAD9-IT1-201ENST00000437983 RNF149Q8NC42 400 aa13.67□□□□□ -0.22
SMAD9-IT1-201ENST00000437983 MSANTD3Q96H12 275 aa13.67□□□□□ -0.22
SMAD9-IT1-201ENST00000437983 CRELD1Q96HD1 420 aa13.67□□□□□ -0.22
SMAD9-IT1-201ENST00000437983 LRRC3BQ96PB8 259 aa13.67□□□□□ -0.22
SMAD9-IT1-201ENST00000437983 HHIPQ96QV1 700 aa13.67□□□□□ -0.22
SMAD9-IT1-201ENST00000437983 TRPV4Q9HBA0 871 aa13.67□□□□□ -0.22
SMAD9-IT1-201ENST00000437983 PARP2Q9UGN5 583 aa13.67□□□□□ -0.22
SMAD9-IT1-201ENST00000437983 SLC8A2Q9UPR5 921 aa13.67□□□□□ -0.22
SMAD9-IT1-201ENST00000437983 INVSQ9Y283 1065 aa13.67□□□□□ -0.22
SMAD9-IT1-201ENST00000437983 KALRNO60229 2985 aa13.67□□□□□ -0.22
SMAD9-IT1-201ENST00000437983 ATG2BQ96BY7 2078 aa13.67□□□□□ -0.22
SMAD9-IT1-201ENST00000437983 ACACAQ13085 2346 aa13.66□□□□□ -0.22
SMAD9-IT1-201ENST00000437983 CHADO15335 359 aa13.66□□□□□ -0.22
SMAD9-IT1-201ENST00000437983 C1QL1O75973 258 aa13.66□□□□□ -0.22
SMAD9-IT1-201ENST00000437983 RHOBTB1O94844 696 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms