RNA–Protein interactions for RNA: ENST00000437951.5

PTCH1-209, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,049 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-209ENST00000437951 RGS2P41220 211 aa12.09□□□□□ -0.47
PTCH1-209ENST00000437951 SPANXN2Q5MJ10 180 aa12.09□□□□□ -0.47
PTCH1-209ENST00000437951 RSL24D1Q9UHA3 163 aaKnown RBP12.09□□□□□ -0.47
PTCH1-209ENST00000437951 FRMPD2Q68DX3 1309 aaPredicted RBP12.09□□□□□ -0.47
PTCH1-209ENST00000437951 PVALEFA0A1B0GWK0 134 aa12.09□□□□□ -0.47
PTCH1-209ENST00000437951 THRAP10827 490 aa12.09□□□□□ -0.47
PTCH1-209ENST00000437951 ZMYM1Q5SVZ6 1142 aa12.09□□□□□ -0.47
PTCH1-209ENST00000437951 C12orf60Q5U649 245 aa12.09□□□□□ -0.47
PTCH1-209ENST00000437951 RASGRP2Q7LDG7 609 aa12.09□□□□□ -0.47
PTCH1-209ENST00000437951 MDM1Q8TC05 714 aa12.09□□□□□ -0.47
PTCH1-209ENST00000437951 MPP4Q96JB8 637 aa12.09□□□□□ -0.47
PTCH1-209ENST00000437951 SCP2P22307 547 aa12.09□□□□□ -0.47
PTCH1-209ENST00000437951 JAK3P52333 1124 aa12.09□□□□□ -0.47
PTCH1-209ENST00000437951 SNX17Q15036 470 aa12.09□□□□□ -0.47
PTCH1-209ENST00000437951 CERKLQ49MI3 558 aaPredicted RBP12.09□□□□□ -0.47
PTCH1-209ENST00000437951 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.09□□□□□ -0.47
PTCH1-209ENST00000437951 RNPC3Q96LT9 517 aaKnown RBP12.09□□□□□ -0.47
PTCH1-209ENST00000437951 MAST1Q9Y2H9 1570 aa12.09□□□□□ -0.47
PTCH1-209ENST00000437951 RTN2O75298 545 aa12.09□□□□□ -0.47
PTCH1-209ENST00000437951 S100A1P23297 94 aa12.09□□□□□ -0.47
PTCH1-209ENST00000437951 KRT84Q9NSB2 600 aa12.09□□□□□ -0.47
PTCH1-209ENST00000437951 FANCAO15360 1455 aa12.09□□□□□ -0.47
PTCH1-209ENST00000437951 USP17L12C9JPN9 530 aa12.08□□□□□ -0.47
PTCH1-209ENST00000437951 USP17L21D6R901 530 aa12.08□□□□□ -0.47
PTCH1-209ENST00000437951 CTSWP56202 376 aa12.08□□□□□ -0.47
PTCH1-209ENST00000437951 VSNL1P62760 191 aa12.08□□□□□ -0.47
PTCH1-209ENST00000437951 ILF2Q12905 390 aaKnown RBP12.08□□□□□ -0.47
PTCH1-209ENST00000437951 KLHL17Q6TDP4 642 aa12.08□□□□□ -0.47
PTCH1-209ENST00000437951 SMARCAD1Q9H4L7 1026 aa12.08□□□□□ -0.47
PTCH1-209ENST00000437951 STK39Q9UEW8 545 aa12.08□□□□□ -0.47
PTCH1-209ENST00000437951 FKBP9O95302 570 aa12.08□□□□□ -0.48
PTCH1-209ENST00000437951 FGFR4P22455 802 aa12.08□□□□□ -0.48
PTCH1-209ENST00000437951 WARSP23381 471 aaKnown RBP12.08□□□□□ -0.48
PTCH1-209ENST00000437951 DLGAP5Q15398 846 aa12.08□□□□□ -0.48
PTCH1-209ENST00000437951 RUNDC3AQ59EK9 446 aa12.08□□□□□ -0.48
PTCH1-209ENST00000437951 PRMT9Q6P2P2 845 aa12.08□□□□□ -0.48
PTCH1-209ENST00000437951 FKBP9P1Q75LS8 142 aa12.08□□□□□ -0.48
PTCH1-209ENST00000437951 PCDHB8Q9UN66 801 aa12.08□□□□□ -0.48
PTCH1-209ENST00000437951 CLIC2O15247 247 aa12.08□□□□□ -0.48
PTCH1-209ENST00000437951 STAT5AP42229 794 aa12.08□□□□□ -0.48
PTCH1-209ENST00000437951 CCT3P49368 545 aaKnown RBP12.08□□□□□ -0.48
PTCH1-209ENST00000437951 STAT5BP51692 787 aa12.08□□□□□ -0.48
PTCH1-209ENST00000437951 ZNF667Q5HYK9 610 aa12.08□□□□□ -0.48
PTCH1-209ENST00000437951 SLC10A4Q96EP9 437 aa12.08□□□□□ -0.48
PTCH1-209ENST00000437951 UBXN6Q9BZV1 441 aa12.08□□□□□ -0.48
PTCH1-209ENST00000437951 PLB1Q6P1J6 1458 aa12.08□□□□□ -0.48
PTCH1-209ENST00000437951 THEM5Q8N1Q8 247 aa12.08□□□□□ -0.48
PTCH1-209ENST00000437951 FAM89AQ96GI7 184 aa12.08□□□□□ -0.48
PTCH1-209ENST00000437951 FRMD8P1Q9BZ68 369 aaPredicted RBP12.08□□□□□ -0.48
PTCH1-209ENST00000437951 CD248Q9HCU0 757 aa12.08□□□□□ -0.48
PTCH1-209ENST00000437951 AKT3Q9Y243 479 aa12.08□□□□□ -0.48
PTCH1-209ENST00000437951 NUMA1Q14980 2115 aa12.08□□□□□ -0.48
PTCH1-209ENST00000437951 PRPF4O43172 522 aaKnown RBP eCLIP12.08□□□□□ -0.48
PTCH1-209ENST00000437951 LIFRP42702 1097 aa12.08□□□□□ -0.48
PTCH1-209ENST00000437951 PRKG1Q13976 671 aa12.08□□□□□ -0.48
PTCH1-209ENST00000437951 EFHC2Q5JST6 749 aa12.08□□□□□ -0.48
PTCH1-209ENST00000437951 CCDC81Q6ZN84 652 aa12.08□□□□□ -0.48
PTCH1-209ENST00000437951 NEK10Q6ZWH5 1172 aa12.08□□□□□ -0.48
PTCH1-209ENST00000437951 ZCCHC7Q8N3Z6 543 aaKnown RBP12.08□□□□□ -0.48
PTCH1-209ENST00000437951 MIEF2Q96C03 454 aa12.08□□□□□ -0.48
PTCH1-209ENST00000437951 PHF20L1A8MW92 1017 aa12.08□□□□□ -0.48
PTCH1-209ENST00000437951 ZNF862O60290 1169 aa12.08□□□□□ -0.48
PTCH1-209ENST00000437951 SDC4P31431 198 aa12.08□□□□□ -0.48
PTCH1-209ENST00000437951 MZT2BQ6NZ67 158 aa12.08□□□□□ -0.48
PTCH1-209ENST00000437951 FHDC1Q9C0D6 1143 aaPredicted RBP12.08□□□□□ -0.48
PTCH1-209ENST00000437951 DDX47Q9H0S4 455 aaKnown RBP12.08□□□□□ -0.48
PTCH1-209ENST00000437951 ISCUQ9H1K1 167 aa12.08□□□□□ -0.48
PTCH1-209ENST00000437951 TAF5LO75529 589 aa12.07□□□□□ -0.48
PTCH1-209ENST00000437951 BCAR1P56945 870 aa12.07□□□□□ -0.48
PTCH1-209ENST00000437951 RNF219Q5W0B1 726 aaPredicted RBP12.07□□□□□ -0.48
PTCH1-209ENST00000437951 GIMAP8Q8ND71 665 aaPredicted RBP12.07□□□□□ -0.48
PTCH1-209ENST00000437951 GANCQ8TET4 914 aa12.07□□□□□ -0.48
PTCH1-209ENST00000437951 IARS2Q9NSE4 1012 aaKnown RBP12.07□□□□□ -0.48
PTCH1-209ENST00000437951 PALD1Q9ULE6 856 aa12.07□□□□□ -0.48
PTCH1-209ENST00000437951 JAG2Q9Y219 1238 aa12.07□□□□□ -0.48
PTCH1-209ENST00000437951 HEY1Q9Y5J3 304 aa12.07□□□□□ -0.48
PTCH1-209ENST00000437951 USP19O94966 1318 aa12.07□□□□□ -0.48
PTCH1-209ENST00000437951 SYNMO15061 1565 aa12.07□□□□□ -0.48
PTCH1-209ENST00000437951 AIM2O14862 343 aa12.07□□□□□ -0.48
PTCH1-209ENST00000437951 AHCYL1O43865 530 aa12.07□□□□□ -0.48
PTCH1-209ENST00000437951 MYOM2P54296 1465 aa12.07□□□□□ -0.48
PTCH1-209ENST00000437951 HPCAP84074 193 aa12.07□□□□□ -0.48
PTCH1-209ENST00000437951 ZNF518AQ6AHZ1 1483 aa12.07□□□□□ -0.48
PTCH1-209ENST00000437951 B3GNT6Q6ZMB0 384 aa12.07□□□□□ -0.48
PTCH1-209ENST00000437951 NLRP10Q86W26 655 aa12.07□□□□□ -0.48
PTCH1-209ENST00000437951 DHX40Q8IX18 779 aaKnown RBP12.07□□□□□ -0.48
PTCH1-209ENST00000437951 CCDC36Q8IYA8 594 aa12.07□□□□□ -0.48
PTCH1-209ENST00000437951 AP5M1Q9H0R1 490 aa12.07□□□□□ -0.48
PTCH1-209ENST00000437951 SPRP35270 261 aaPredicted RBP12.07□□□□□ -0.48
PTCH1-209ENST00000437951 NCALDP61601 193 aa12.07□□□□□ -0.48
PTCH1-209ENST00000437951 FRMD5Q7Z6J6 570 aa12.07□□□□□ -0.48
PTCH1-209ENST00000437951 TBCKQ8TEA7 893 aa12.07□□□□□ -0.48
PTCH1-209ENST00000437951 ARHGEF26Q96DR7 871 aa12.07□□□□□ -0.48
PTCH1-209ENST00000437951 EFCAB1Q9HAE3 211 aa12.07□□□□□ -0.48
PTCH1-209ENST00000437951 FBXO28Q9NVF7 368 aa12.07□□□□□ -0.48
PTCH1-209ENST00000437951 NEURL1BA8MQ27 555 aa12.07□□□□□ -0.48
PTCH1-209ENST00000437951 CAND2O75155 1236 aa12.07□□□□□ -0.48
PTCH1-209ENST00000437951 PGM3O95394 542 aa12.07□□□□□ -0.48
PTCH1-209ENST00000437951 SNRPAP09012 282 aaKnown RBP12.07□□□□□ -0.48
PTCH1-209ENST00000437951 SH3BP5LQ7L8J4 393 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms